Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p065949 Quercus lobata HOM05D007453 ORTHO05D009223 1.3e-111 406.4 206 100.0
Cfa009043 Carpinus fangiana HOM05D007453 ORTHO05D009223 3.7e-77 292.0 207 75.8
CiPaw.05G140500 Carya illinoinensis HOM05D007453 ORTHO05D009223 4.1e-76 288.5 206 75.2
Haze_12073 Corylus avellana HOM05D007453 ORTHO05D009223 6.7e-71 271.2 236 66.1
Prupe.1G267100 Prunus persica HOM05D007453 ORTHO05D009223 1.1e-68 263.8 208 72.6
TWI75G0120 Tripterygium wilfordii HOM05D007453 ORTHO05D009223 4.1e-68 261.9 203 70.0
Gohir.D05G323400 Gossypium hirsutum HOM05D007453 ORTHO05D009223 1.4e-65 253.4 206 64.6
Duzib248G0401 Durio zibethinus HOM05D007453 ORTHO05D009223 3.2e-65 252.3 203 68.5
Thecc.02G232500 Theobroma cacao HOM05D007453 ORTHO05D009223 9.4e-65 250.8 203 68.0
COL.COLO4_36183 Corchorus olitorius HOM05D007453 ORTHO05D009223 1.0e-63 247.3 204 67.6
CsaV3_5G032280 Cucumis sativus L. HOM05D007453 ORTHO05D009223 8.8e-63 244.2 202 67.3
PGR119G1700 Punica granatum HOM05D007453 ORTHO05D009223 1.1e-62 243.8 206 65.5
FAN07G0059 Fragaria x ananassa HOM05D007453 ORTHO05D009223 5.7e-62 241.5 208 67.3
Ciclev10032837m.g Citrus clementina HOM05D007453 ORTHO05D009223 9.7e-62 240.7 204 67.2
MD13G1079700 Malus domestica HOM05D007453 ORTHO05D009223 9.7e-62 240.7 213 65.3
Lalb_Chr10g0097941 Lupinus albus HOM05D007453 ORTHO05D009223 3.7e-61 238.8 205 63.4
Dinv24949 Davidia involucrata HOM05D007453 ORTHO05D009223 1.8e-60 236.5 204 65.7
FvH4_4g32080 Fragaria vesca HOM05D007453 ORTHO05D009223 1.8e-60 236.5 208 65.9
FAN22G0202 Fragaria x ananassa HOM05D007453 ORTHO05D009223 1.8e-60 236.5 208 66.3
Ca_07373_v3 Cicer arietinum L. HOM05D007453 ORTHO05D009223 6.9e-60 234.6 203 64.5
Cpa.g.sc1379.2 Carica papaya HOM05D007453 ORTHO05D009223 1.5e-59 233.4 209 62.2
MELO3C012060.2 Cucumis melo HOM05D007453 ORTHO05D009223 3.4e-59 232.3 202 64.9
Duzib248G0483 Durio zibethinus HOM05D007453 ORTHO05D009223 3.4e-59 232.3 203 64.0
Sp1g21730 Schrenkiella parvula HOM05D007453 ORTHO05D009223 3.4e-59 232.3 212 63.2
Gorai.009G347100 Gossypium raimondii HOM05D007453 ORTHO05D009223 4.5e-59 231.9 203 61.1
AL1G38440 Arabidopsis lyrata HOM05D007453 ORTHO05D009223 1.0e-58 230.7 211 63.5
Lj2g0026857 Lotus japonicus HOM05D007453 ORTHO05D009223 2.9e-58 229.2 203 63.5
Duzib251G0796 Durio zibethinus HOM05D007453 ORTHO05D009223 3.8e-58 228.8 203 63.1
Phvul.002G067300 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 6.5e-58 228.0 203 62.1
Manes.05G095900 Manihot esculenta HOM05D007453 ORTHO05D009223 1.1e-57 227.3 203 65.0
RcHm_v2.0_Chr4g0440771 Rosa chinensis HOM05D007453 ORTHO05D009223 1.1e-57 227.3 209 64.6
TPR.G29466 Trifolium pratense HOM05D007453 ORTHO05D009223 1.4e-57 226.9 203 62.6
CARHR024860 Cardamine hirsuta HOM05D007453 ORTHO05D009223 1.9e-57 226.5 211 61.1
BcaC06g35095 Brassica carinata HOM05D007453 ORTHO05D009223 3.2e-57 225.7 209 61.7
AT1G27050 Arabidopsis thaliana HOM05D007453 ORTHO05D009223 4.2e-57 225.3 210 60.0
arahy.Tifrunner.gnm1.ann1.QA8CWD Arachis hypogaea HOM05D007453 ORTHO05D009223 4.2e-57 225.3 203 61.1
Aa31LG7G8100 Aethionema arabicum HOM05D007453 ORTHO05D009223 7.2e-57 224.6 222 60.8
Sed0013591 Sechium edule HOM05D007453 ORTHO05D009223 1.6e-56 223.4 211 61.1
VMungo1215G3437 Vigna mungo HOM05D007453 ORTHO05D009223 1.6e-56 223.4 203 60.1
C07p19880 Brassica napus HOM05D007453 ORTHO05D009223 2.1e-56 223.0 209 61.2
BolC7t42507H Brassica oleracea HOM05D007453 ORTHO05D009223 2.1e-56 223.0 209 61.2
CiPaw.06G080300 Carya illinoinensis HOM05D007453 ORTHO05D009223 2.1e-56 223.0 170 72.4
arahy.Tifrunner.gnm1.ann1.D3ZUUX Arachis hypogaea HOM05D007453 ORTHO05D009223 2.7e-56 222.6 203 60.6
Medtr5g038225 Medicago truncatula HOM05D007453 ORTHO05D009223 2.7e-56 222.6 203 61.1
Atru.chr11.1862 Acer truncatum HOM05D007453 ORTHO05D009223 6.1e-56 221.5 198 63.1
BcaB03g14102 Brassica carinata HOM05D007453 ORTHO05D009223 2.3e-55 219.5 208 61.1
Psat2g125360 Pisum sativum HOM05D007453 ORTHO05D009223 6.7e-55 218.0 203 60.6
THA.LOC104822931 Tarenaya hassleriana HOM05D007453 ORTHO05D009223 6.7e-55 218.0 207 61.4
HanXRQChr17g0544601 Helianthus annuus HOM05D007453 ORTHO05D009223 1.1e-54 217.2 214 57.0
ClCG05G024650 Citrullus lanatus HOM05D007453 ORTHO05D009223 1.5e-54 216.9 196 62.8
Glyma.01G041651 Glycine max HOM05D007453 ORTHO05D009223 2.6e-54 216.1 204 59.8
Sabra10G0030300 Salix brachista HOM05D007453 ORTHO05D009223 5.7e-54 214.9 153 73.9
Actinidia08212 Actinidia chinensis HOM05D007453 ORTHO05D009223 1.3e-53 213.8 205 59.5
Thhalv10008803m.g Eutrema salsugineum HOM05D007453 ORTHO05D009223 1.7e-53 213.4 207 59.9
CSS0012607 Camellia sinensis var. sinensis HOM05D007453 ORTHO05D009223 4.8e-53 211.8 203 59.1
Gohir.A05G321200 Gossypium hirsutum HOM05D007453 ORTHO05D009223 1.8e-52 209.9 147 70.7
Eucgr.B03407 Eucalyptus grandis HOM05D007453 ORTHO05D009223 4.1e-52 208.8 206 59.7
vmacro16323 Vaccinium macrocarpon HOM05D007453 ORTHO05D009223 9.1e-52 207.6 207 57.5
FAN12G0628 Fragaria x ananassa HOM05D007453 ORTHO05D009223 2.0e-51 206.5 208 61.1
TAR481G0010 Trochodendron aralioides HOM05D007453 ORTHO05D009223 2.6e-51 206.1 203 56.7
Potri.010G034500 Populus trichocarpa HOM05D007453 ORTHO05D009223 1.0e-50 204.1 148 71.6
Carub.0001s2392 Capsella rubella HOM05D007453 ORTHO05D009223 3.8e-50 202.2 215 58.1
Glyma.02G022351 Glycine max HOM05D007453 ORTHO05D009223 1.1e-49 200.7 147 68.7
Actinidia19855 Actinidia chinensis HOM05D007453 ORTHO05D009223 4.2e-49 198.7 204 57.8
PGSC0003DMG400017639 Solanum tuberosum HOM05D007453 ORTHO05D009223 9.4e-49 197.6 210 53.8
Lsat_1_v5_gn_3_49860 Lactuca sativa HOM05D007453 ORTHO05D009223 1.2e-48 197.2 186 58.1
ECA246G4987 Erigeron canadensis HOM05D007453 ORTHO05D009223 1.6e-48 196.8 219 54.8
GSVIVG01020080001 Vitis vinifera HOM05D007453 ORTHO05D009223 2.1e-48 196.4 203 57.6
Phvul.002G077900 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 2.7e-48 196.1 167 61.7
Cc11_g13560 Coffea canephora HOM05D007453 ORTHO05D009223 4.7e-48 195.3 224 52.7
Solyc05g006960.3 Solanum lycopersicum HOM05D007453 ORTHO05D009223 1.4e-47 193.7 210 52.9
Sopen05g002920 Solanum pennellii HOM05D007453 ORTHO05D009223 1.4e-47 193.7 210 52.9
MSTRG.13399 Avicennia marina HOM05D007453 ORTHO05D009223 6.7e-47 191.4 215 53.5
Rhsim12G0129600 Rhododendron simsii HOM05D007453 ORTHO05D009223 4.4e-46 188.7 257 47.5
A07p13280 Brassica napus HOM05D007453 ORTHO05D009223 7.5e-46 188.0 206 57.3
Nitab4.5_0000679g0070 Nicotiana tabacum HOM05D007453 ORTHO05D009223 1.3e-45 187.2 237 48.5
BraA07t29098Z Brassica rapa HOM05D007453 ORTHO05D009223 1.7e-45 186.8 206 56.8
DCAR_031058 Daucus carota HOM05D007453 ORTHO05D009223 2.8e-45 186.0 213 53.5
Hund05917 Selenicereus undatus HOM05D007453 ORTHO05D009223 4.1e-44 182.2 203 53.2
SGA_v2.0_scaffold87G26973 Striga asiatica HOM05D007453 ORTHO05D009223 2.2e-42 176.4 222 49.1
MSTRG.2362 Avicennia marina HOM05D007453 ORTHO05D009223 1.9e-41 173.3 225 49.3
EL10Ac6g13141 Beta vulgaris HOM05D007453 ORTHO05D009223 4.2e-41 172.2 210 48.1
Nitab4.5_0002969g0020 Nicotiana tabacum HOM05D007453 ORTHO05D009223 5.5e-41 171.8 230 47.8
SalBow8G2121 Salvia bowleyana HOM05D007453 ORTHO05D009223 2.1e-40 169.9 221 47.5
PSO832G2667 Papaver somniferum HOM05D007453 ORTHO05D009223 2.7e-40 169.5 207 46.4
Migut.E00119 Erythranthe guttata HOM05D007453 ORTHO05D009223 3.6e-40 169.1 226 47.3
MBI01_g12858_MAGBIO Magnolia biondii HOM05D007453 ORTHO05D009223 1.8e-39 166.8 208 49.0
PSO591G0176 Papaver somniferum HOM05D007453 ORTHO05D009223 3.4e-38 162.5 207 46.4
unitig_62.g23683 Utricularia gibba HOM05D007453 ORTHO05D009223 2.8e-37 159.5 212 47.6
Sc11g0001650 Simmondsia chinensis HOM05D007453 ORTHO05D009223 8.3e-37 157.9 207 47.3
Peaxi162Scf00209g00516 Petunia axillaris HOM05D007453 ORTHO05D009223 3.8e-34 149.1 157 53.5
Aqoxy3G03257 Aquilegia oxysepala HOM05D007453 ORTHO05D009223 9.5e-33 144.4 148 52.0
ATR0665G072 Amborella trichopoda HOM05D007453 ORTHO05D009223 9.8e-30 134.4 204 42.2
Dinv40682 Davidia involucrata HOM05D007453 ORTHO05D009223 2.8e-29 132.9 142 55.6
CDE05G3569 Ceratophyllum demersum HOM05D007453 ORTHO05D009223 6.3e-29 131.7 203 40.9
HPP92_001648 Vanilla planifolia HOM05D007453 ORTHO05D009223 9.2e-28 127.9 205 44.9
Lj6C173T12 Lonicera japonica HOM05D007453 ORTHO05D009223 1.1e-25 120.9 122 55.7
AUR62026455 Chenopodium quinoa HOM05D007453 ORTHO05D009223 6.1e-24 115.2 127 52.0
AUR62026264 Chenopodium quinoa HOM05D007453 ORTHO05D009223 5.8e-22 108.6 135 48.9
A07p13630 Brassica napus HOM05D007453 ORTHO05D009223 3.7e-21 105.9 126 53.2
Nn4g23028 Nelumbo nucifera HOM05D007453 ORTHO05D009223 2.8e-16 89.7 100 51.0
HPP92_001630 Vanilla planifolia HOM05D007453 ORTHO05D009223 2.8e-16 89.7 96 56.2
Lj6C173T11 Lonicera japonica HOM05D007453 ORTHO05D009223 2.2e-13 80.1 89 50.6
Pp3c14_1800 Physcomitrium patens HOM05D030917 ORTHO05D009223 6.2e-08 62.0 170 28.2


User provided reference genes

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