Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p064628 Quercus lobata HOM05D005155 ORTHO05D006266 7.6e-116 420.6 230 100.0
Haze_24928 Corylus avellana HOM05D005155 ORTHO05D006266 1.9e-37 160.2 320 44.4
CiPaw.04G197900 Carya illinoinensis HOM05D005155 ORTHO05D006266 2.8e-33 146.4 310 39.0
Prupe.3G194600 Prunus persica HOM05D005155 ORTHO05D006266 6.2e-33 145.2 318 37.1
Cfa014201 Carpinus fangiana HOM05D005155 ORTHO05D006266 2.2e-30 136.7 324 42.0
QL04p067008 Quercus lobata HOM05D005155 ORTHO05D006266 9.2e-29 131.3 264 44.3
CiPaw.03G283900 Carya illinoinensis HOM05D005155 ORTHO05D006266 9.6e-26 121.3 308 37.7
Ciclev10015959m.g Citrus clementina HOM05D005155 ORTHO05D006266 8.1e-25 118.2 325 36.0
TWI75G0909 Tripterygium wilfordii HOM05D005155 ORTHO05D006266 2.4e-24 116.7 316 34.8
FAN09G4460 Fragaria x ananassa HOM05D005155 ORTHO05D006266 9.0e-24 114.8 314 38.2
CSS0035525 Camellia sinensis var. sinensis HOM05D005155 ORTHO05D006266 1.2e-23 114.4 321 32.7
FAN02G4414 Fragaria x ananassa HOM05D005155 ORTHO05D006266 2.0e-23 113.6 310 38.1
Dinv21322 Davidia involucrata HOM05D005155 ORTHO05D006266 4.4e-23 112.5 318 34.0
Potri.014G170500 Populus trichocarpa HOM05D005155 ORTHO05D006266 1.3e-22 110.9 315 34.3
Actinidia20603 Actinidia chinensis HOM05D005155 ORTHO05D006266 2.9e-22 109.8 322 35.4
PGR044G0745 Punica granatum HOM05D005155 ORTHO05D006266 4.9e-22 109.0 310 33.9
QL01p014609 Quercus lobata HOM05D005155 ORTHO05D006266 6.4e-22 108.6 102 64.7
Hma1.2p1_0629F.1_g192150 Hydrangea macrophylla HOM05D005155 ORTHO05D006266 8.4e-22 108.2 322 33.9
CANSAT64G2107 Cannabis sativa HOM05D005155 ORTHO05D006266 2.4e-21 106.7 328 34.1
Manes.13G059900 Manihot esculenta HOM05D005155 ORTHO05D006266 3.2e-21 106.3 312 32.1
Atru.chr6.3431 Acer truncatum HOM05D005155 ORTHO05D006266 9.3e-21 104.8 299 36.5
Rhsim04G0007200 Rhododendron simsii HOM05D005155 ORTHO05D006266 1.6e-20 104.0 331 35.0
ClCG02G003040 Citrullus lanatus HOM05D005155 ORTHO05D006266 6.0e-20 102.1 311 34.4
CSS0023894 Camellia sinensis var. sinensis HOM05D005155 ORTHO05D006266 7.8e-20 101.7 316 32.6
Nn1g02050 Nelumbo nucifera HOM05D005155 ORTHO05D006266 7.8e-20 101.7 275 36.0
Gohir.D11G154600 Gossypium hirsutum HOM05D005155 ORTHO05D006266 1.0e-19 101.3 297 34.7
Gorai.007G164700 Gossypium raimondii HOM05D005155 ORTHO05D006266 1.0e-19 101.3 297 35.0
Actinidia20617 Actinidia chinensis HOM05D005155 ORTHO05D006266 1.7e-19 100.5 269 34.2
Haze_12586 Corylus avellana HOM05D005155 ORTHO05D006266 2.3e-19 100.1 219 37.9
MELO3C024180.2 Cucumis melo HOM05D005155 ORTHO05D006266 3.9e-19 99.4 322 31.7
FAN05G3842 Fragaria x ananassa HOM05D005155 ORTHO05D006266 5.1e-19 99.0 309 36.6
CsaV3_7G002370 Cucumis sativus L. HOM05D005155 ORTHO05D006266 8.7e-19 98.2 322 31.7
FvH4_6g40390 Fragaria vesca HOM05D005155 ORTHO05D006266 1.5e-18 97.4 310 36.1
Glyma.19G235800 Glycine max HOM05D005155 ORTHO05D006266 1.5e-18 97.4 333 32.4
MD09G1131700 Malus domestica HOM05D005155 ORTHO05D006266 2.5e-18 96.7 324 34.0
Dinv05324 Davidia involucrata HOM05D005155 ORTHO05D006266 3.3e-18 96.3 264 34.8
QL03p064635 Quercus lobata HOM05D005155 ORTHO05D006266 4.3e-18 95.9 50 92.0
Eucgr.K01388 Eucalyptus grandis HOM05D005155 ORTHO05D006266 9.6e-18 94.7 317 34.1
Gohir.A11G147700 Gossypium hirsutum HOM05D005155 ORTHO05D006266 9.6e-18 94.7 240 37.5
Cpa.g.sc136.55 Carica papaya HOM05D005155 ORTHO05D006266 1.3e-17 94.4 321 33.0
Phvul.006G092400 Phaseolus vulgaris HOM05D005155 ORTHO05D006266 1.3e-17 94.4 335 31.6
RcHm_v2.0_Chr2g0155591 Rosa chinensis HOM05D005155 ORTHO05D006266 1.6e-17 94.0 308 34.1
Glyma.03G238300 Glycine max HOM05D005155 ORTHO05D006266 2.1e-17 93.6 334 31.7
Thecc.01G199500 Theobroma cacao HOM05D005155 ORTHO05D006266 1.1e-16 91.3 299 35.8
VMungo0540G1824 Vigna mungo HOM05D005155 ORTHO05D006266 2.4e-16 90.1 332 34.9
Gorai.001G190100 Gossypium raimondii HOM05D005155 ORTHO05D006266 3.1e-16 89.7 302 32.5
Lj4g0024217 Lotus japonicus HOM05D005155 ORTHO05D006266 5.3e-16 89.0 336 30.4
arahy.Tifrunner.gnm1.ann1.FV1RU3 Arachis hypogaea HOM05D005155 ORTHO05D006266 6.9e-16 88.6 334 34.7
arahy.Tifrunner.gnm1.ann1.ZBS9GV Arachis hypogaea HOM05D005155 ORTHO05D006266 6.9e-16 88.6 334 34.7
Duzib211G0098 Durio zibethinus HOM05D005155 ORTHO05D006266 6.9e-16 88.6 296 34.5
Actinidia24711 Actinidia chinensis HOM05D005155 ORTHO05D006266 1.2e-15 87.8 269 33.8
Lalb_Chr21g0315451 Lupinus albus HOM05D005155 ORTHO05D006266 1.2e-15 87.8 326 31.0
Gohir.D07G170200 Gossypium hirsutum HOM05D005155 ORTHO05D006266 1.5e-15 87.4 301 32.6
TPR.G3861 Trifolium pratense HOM05D005155 ORTHO05D006266 1.5e-15 87.4 346 30.1
Sed0007088 Sechium edule HOM05D005155 ORTHO05D006266 2.6e-15 86.7 323 30.7
Nitab4.5_0004941g0060 Nicotiana tabacum HOM05D005155 ORTHO05D006266 5.8e-15 85.5 336 31.8
Oeu022053.1 Olea europaea HOM05D005155 ORTHO05D006266 5.8e-15 85.5 318 31.1
Gohir.A07G163100 Gossypium hirsutum HOM05D005155 ORTHO05D006266 7.6e-15 85.1 303 31.4
THA.LOC104802634 Tarenaya hassleriana HOM05D005155 ORTHO05D006266 9.9e-15 84.7 264 33.7
DCAR_021083 Daucus carota HOM05D005155 ORTHO05D006266 1.7e-14 84.0 323 31.6
Nitab4.5_0003086g0050 Nicotiana tabacum HOM05D005155 ORTHO05D006266 1.7e-14 84.0 316 33.9
MD17G1119200 Malus domestica HOM05D005155 ORTHO05D006266 2.2e-14 83.6 245 32.7
Duzib138G0133 Durio zibethinus HOM05D005155 ORTHO05D006266 2.9e-14 83.2 297 33.0
Psat7g043480 Pisum sativum HOM05D005155 ORTHO05D006266 2.9e-14 83.2 300 32.0
Nn3g19477 Nelumbo nucifera HOM05D005155 ORTHO05D006266 2.4e-13 80.1 239 34.7
Aqoxy3G04181 Aquilegia oxysepala HOM05D005155 ORTHO05D006266 7.1e-13 78.6 336 34.2
GSVIVG01030126001 Vitis vinifera HOM05D005155 ORTHO05D006266 7.1e-13 78.6 278 31.7
FAN14G3535 Fragaria x ananassa HOM05D005155 ORTHO05D006266 1.2e-12 77.8 333 32.7
Solyc05g005730.4 Solanum lycopersicum HOM05D005155 ORTHO05D006266 1.6e-12 77.4 305 29.5
PGSC0003DMG400004112 Solanum tuberosum HOM05D005155 ORTHO05D006266 2.1e-12 77.0 353 28.0
Aa31LG4G7530 Aethionema arabicum HOM05D005155 ORTHO05D006266 2.7e-12 76.6 322 30.1
Lsat_1_v5_gn_0_13881 Lactuca sativa HOM05D005155 ORTHO05D006266 2.7e-12 76.6 325 34.2
Sp2g18610 Schrenkiella parvula HOM05D005155 ORTHO05D006266 2.7e-12 76.6 297 31.3
Sopen05g001730 Solanum pennellii HOM05D005155 ORTHO05D006266 2.7e-12 76.6 276 30.4
TAR629G2368 Trochodendron aralioides HOM05D005155 ORTHO05D006266 7.9e-12 75.1 242 29.8
Thhalv10004636m.g Eutrema salsugineum HOM05D005155 ORTHO05D006266 1.8e-11 73.9 304 29.3
Psat5g216800 Pisum sativum HOM05D005155 ORTHO05D006266 2.3e-11 73.6 203 36.0
Ah.08g210400 Amaranthus hybridus HOM05D005155 ORTHO05D006266 3.0e-11 73.2 254 29.5
C09p04670 Brassica napus HOM05D005155 ORTHO05D006266 3.0e-11 73.2 276 31.9
PSO210G0096 Papaver somniferum HOM05D005155 ORTHO05D006266 3.0e-11 73.2 324 29.3
A09p04360 Brassica napus HOM05D005155 ORTHO05D006266 3.9e-11 72.8 317 30.0
BcaC04g23785 Brassica carinata HOM05D005155 ORTHO05D006266 6.7e-11 72.0 278 31.3
COL.COLO4_19654 Corchorus olitorius HOM05D005155 ORTHO05D006266 6.7e-11 72.0 136 37.5
PSO782G4695 Papaver somniferum HOM05D005155 ORTHO05D006266 8.7e-11 71.6 319 26.3
Carub.0008s0781 Capsella rubella HOM05D005155 ORTHO05D006266 1.1e-10 71.2 304 29.9
Peaxi162Scf00359g00214 Petunia axillaris HOM05D005155 ORTHO05D006266 1.1e-10 71.2 316 30.7
unitig_26.g9470 Utricularia gibba HOM05D003767 ORTHO05D004507 1.1e-10 71.2 232 31.9
AT5G48240 Arabidopsis thaliana HOM05D005155 ORTHO05D006266 1.5e-10 70.9 304 30.3
BcaB04g19566 Brassica carinata HOM05D005155 ORTHO05D006266 1.5e-10 70.9 320 29.4
BraA09t36073Z Brassica rapa HOM05D005155 ORTHO05D006266 1.9e-10 70.5 258 32.9
BolC9t53395H Brassica oleracea HOM05D005155 ORTHO05D006266 5.6e-10 68.9 245 32.7
Ca_02017_v3 Cicer arietinum L. HOM05D005155 ORTHO05D006266 5.6e-10 68.9 272 31.2
THA.LOC104819027 Tarenaya hassleriana HOM05D005155 ORTHO05D006266 7.4e-10 68.6 302 32.1
AL8G20970 Arabidopsis lyrata HOM05D005155 ORTHO05D006266 1.3e-09 67.8 299 28.4
A06p39310 Brassica napus HOM05D005155 ORTHO05D006266 1.6e-09 67.4 231 30.7
C07p38970 Brassica napus HOM05D005155 ORTHO05D006266 1.6e-09 67.4 308 29.2
SGA_v2.0_scaffold181G39700 Striga asiatica HOM05D005155 ORTHO05D006266 3.7e-09 66.2 167 32.9
SalBow7G0407 Salvia bowleyana HOM05D005155 ORTHO05D006266 6.2e-09 65.5 304 31.6
HPP92_009941 Vanilla planifolia HOM05D005155 ORTHO05D006266 6.2e-09 65.5 266 32.0
BcaC06g30816 Brassica carinata HOM05D005155 ORTHO05D006266 1.4e-08 64.3 185 34.1
CAN.G1447.4 Capsicum annuum HOM05D005155 ORTHO05D006266 1.4e-08 64.3 351 28.5
BraA06t26845Z Brassica rapa HOM05D005155 ORTHO05D006266 1.8e-08 63.9 174 33.3
CARHR218550 Cardamine hirsuta HOM05D005155 ORTHO05D006266 1.8e-08 63.9 132 36.4
CARHR286520 Cardamine hirsuta HOM05D005155 ORTHO05D006266 1.8e-08 63.9 302 28.5
AUR62030994 Chenopodium quinoa HOM05D005155 ORTHO05D006266 4.0e-08 62.8 183 32.2
TPR.G35685 Trifolium pratense HOM05D005155 ORTHO05D006266 4.0e-08 62.8 272 29.8
MSTRG.6620 Avicennia marina HOM05D005155 ORTHO05D006266 9.0e-08 61.6 159 37.1
HanXRQChr01g0006811 Helianthus annuus HOM05D005155 ORTHO05D006266 9.0e-08 61.6 329 29.2
BolC7t44418H Brassica oleracea HOM05D005155 ORTHO05D006266 1.2e-07 61.2 150 35.3
Lj1A800T38 Lonicera japonica HOM05D005155 ORTHO05D006266 2.0e-07 60.5 332 26.8
PSO782G0752 Papaver somniferum HOM05D005155 ORTHO05D006266 3.4e-07 59.7 148 41.9
MBI04_g26115_MAGBIO Magnolia biondii HOM05D005155 ORTHO05D006266 4.5e-07 59.3 292 28.1
Sc20g0004590 Simmondsia chinensis HOM05D005155 ORTHO05D006266 1.0e-06 58.2 151 33.8
Ah.08g219720 Amaranthus hybridus HOM05D005155 ORTHO05D006266 1.7e-06 57.4 252 28.2
CAN.G715.5 Capsicum annuum HOM05D005155 ORTHO05D006266 1.7e-06 57.4 260 27.7
Migut.M00065 Erythranthe guttata HOM05D005155 ORTHO05D006266 2.2e-06 57.0 353 29.2
Cc02_g33980 Coffea canephora HOM05D005155 ORTHO05D006266 6.4e-06 55.5 280 27.5


User provided reference genes

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