Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p063036 Quercus lobata HOM05D004646 ORTHO05D005829 1.8e-38 162.2 84 100.0
QL03p064307 Quercus lobata HOM05D004646 ORTHO05D005829 2.9e-36 154.8 79 100.0
Duzib251G0705 Durio zibethinus HOM05D004646 ORTHO05D005829 3.2e-35 151.4 83 92.8
Gorai.012G187500 Gossypium raimondii HOM05D004646 ORTHO05D005829 7.0e-35 150.2 79 96.2
Sc14g0008260 Simmondsia chinensis HOM05D004646 ORTHO05D005829 9.2e-35 149.8 78 98.7
Cfa008987 Carpinus fangiana HOM05D004646 ORTHO05D005829 1.2e-34 149.4 79 96.2
CiPaw.05G135800 Carya illinoinensis HOM05D004646 ORTHO05D005829 1.2e-34 149.4 79 96.2
COL.COLO4_23008 Corchorus olitorius HOM05D004646 ORTHO05D005829 2.0e-34 148.7 79 96.2
Potri.008G147600 Populus trichocarpa HOM05D004646 ORTHO05D005829 3.5e-34 147.9 79 93.7
Sabra08G0112200 Salix brachista HOM05D004646 ORTHO05D005829 3.5e-34 147.9 79 93.7
Thecc.02G347000 Theobroma cacao HOM05D004646 ORTHO05D005829 3.5e-34 147.9 79 94.9
Atru.chr11.1794 Acer truncatum HOM05D004646 ORTHO05D005829 4.6e-34 147.5 79 93.7
CANSAT64G1881 Cannabis sativa HOM05D004646 ORTHO05D005829 4.6e-34 147.5 79 93.7
Ciclev10032082m.g Citrus clementina HOM05D004646 ORTHO05D005829 4.6e-34 147.5 79 93.7
Gohir.D04G192100 Gossypium hirsutum HOM05D004646 ORTHO05D005829 4.6e-34 147.5 78 94.9
FvH4_4g31430 Fragaria vesca HOM05D004646 ORTHO05D005829 5.9e-34 147.1 79 94.9
FAN07G2721 Fragaria x ananassa HOM05D004646 ORTHO05D005829 5.9e-34 147.1 79 94.9
FAN12G2979 Fragaria x ananassa HOM05D004646 ORTHO05D005829 5.9e-34 147.1 79 94.9
FAN17G1826 Fragaria x ananassa HOM05D004646 ORTHO05D005829 5.9e-34 147.1 79 94.9
FAN22G0666 Fragaria x ananassa HOM05D004646 ORTHO05D005829 5.9e-34 147.1 79 94.9
RcHm_v2.0_Chr4g0439911 Rosa chinensis HOM05D004646 ORTHO05D005829 5.9e-34 147.1 79 94.9
Glyma.18G119400 Glycine max HOM05D004646 ORTHO05D005829 7.8e-34 146.7 79 93.7
Glyma.08G300800 Glycine max HOM05D004646 ORTHO05D005829 1.0e-33 146.4 79 93.7
Phvul.L004046 Phaseolus vulgaris HOM05D004646 ORTHO05D005829 1.0e-33 146.4 79 93.7
VMungo1127G0944 Vigna mungo HOM05D004646 ORTHO05D005829 1.0e-33 146.4 79 93.7
Nn3g17224 Nelumbo nucifera HOM05D004646 ORTHO05D005829 1.3e-33 146.0 78 92.3
CsaV3_5G032630 Cucumis sativus L. HOM05D004646 ORTHO05D005829 1.7e-33 145.6 78 94.9
Gohir.A04G147800 Gossypium hirsutum HOM05D004646 ORTHO05D005829 1.7e-33 145.6 79 92.4
MELO3C012090.2 Cucumis melo HOM05D004646 ORTHO05D005829 2.3e-33 145.2 79 92.4
Hma1.2p1_0795F.1_g218775 Hydrangea macrophylla HOM05D004646 ORTHO05D005829 2.3e-33 145.2 79 92.4
Nitab4.5_0011071g0010 Nicotiana tabacum HOM05D004646 ORTHO05D005829 2.3e-33 145.2 84 85.7
ClCG05G024330 Citrullus lanatus HOM05D004646 ORTHO05D005829 3.9e-33 144.4 77 96.1
Eucgr.B03438 Eucalyptus grandis HOM05D004646 ORTHO05D005829 3.9e-33 144.4 79 92.4
MD13G1072600 Malus domestica HOM05D004646 ORTHO05D005829 3.9e-33 144.4 79 92.4
MD16G1073400 Malus domestica HOM05D004646 ORTHO05D005829 3.9e-33 144.4 79 92.4
Nitab4.5_0001503g0160 Nicotiana tabacum HOM05D004646 ORTHO05D005829 3.9e-33 144.4 79 89.9
GSVIVG01019995001 Vitis vinifera HOM05D004646 ORTHO05D005829 3.9e-33 144.4 79 93.7
Aqoxy3G03371 Aquilegia oxysepala HOM05D004646 ORTHO05D005829 6.6e-33 143.7 79 91.1
EL10Ac6g13196 Beta vulgaris HOM05D004646 ORTHO05D005829 6.6e-33 143.7 79 92.4
AUR62005771 Chenopodium quinoa HOM05D004646 ORTHO05D005829 6.6e-33 143.7 80 90.0
Lj4g0000065 Lotus japonicus HOM05D004646 ORTHO05D005829 6.6e-33 143.7 79 91.1
Sed0009585 Sechium edule HOM05D004646 ORTHO05D005829 6.6e-33 143.7 79 92.4
MSTRG.7804 Avicennia marina HOM05D004646 ORTHO05D005829 8.6e-33 143.3 78 92.3
Manes.05G100900 Manihot esculenta HOM05D004646 ORTHO05D005829 8.6e-33 143.3 79 88.6
Phvul.011G179800 Phaseolus vulgaris HOM05D004646 ORTHO05D005829 8.6e-33 143.3 79 91.1
Prupe.1G273600 Prunus persica HOM05D004646 ORTHO05D005829 8.6e-33 143.3 79 92.4
Peaxi162Scf00541g00118 Petunia axillaris HOM05D004646 ORTHO05D005829 1.1e-32 142.9 84 83.3
Psat4g134400 Pisum sativum HOM05D004646 ORTHO05D005829 1.1e-32 142.9 79 89.9
PGR102G1495 Punica granatum HOM05D004646 ORTHO05D005829 1.1e-32 142.9 79 91.1
AUR62028786 Chenopodium quinoa HOM05D004646 ORTHO05D005829 1.5e-32 142.5 78 92.3
Ca_27800_v3 Cicer arietinum L. HOM05D004646 ORTHO05D005829 1.5e-32 142.5 77 93.5
Actinidia31896 Actinidia chinensis HOM05D004646 ORTHO05D005829 1.9e-32 142.1 79 88.6
arahy.Tifrunner.gnm1.ann1.9WQ92K Arachis hypogaea HOM05D004646 ORTHO05D005829 1.9e-32 142.1 79 91.1
arahy.Tifrunner.gnm1.ann1.K6CIAB Arachis hypogaea HOM05D004646 ORTHO05D005829 1.9e-32 142.1 79 91.1
PGSC0003DMG400031270 Solanum tuberosum HOM05D004646 ORTHO05D005829 2.5e-32 141.7 79 88.6
Hund25246 Selenicereus undatus HOM05D004646 ORTHO05D005829 3.3e-32 141.4 79 89.9
Medtr8g467540 Medicago truncatula HOM05D004646 ORTHO05D005829 4.3e-32 141.0 77 92.2
unitig_747.g21177 Utricularia gibba HOM05D004646 ORTHO05D005829 4.3e-32 141.0 77 92.2
ECA233G2883 Erigeron canadensis HOM05D004646 ORTHO05D005829 5.6e-32 140.6 79 87.3
Lalb_Chr05g0220381 Lupinus albus HOM05D004646 ORTHO05D005829 5.6e-32 140.6 77 92.2
Solyc05g007500.4 Solanum lycopersicum HOM05D004646 ORTHO05D005829 7.3e-32 140.2 79 87.3
Sopen05g003380 Solanum pennellii HOM05D004646 ORTHO05D005829 7.3e-32 140.2 79 87.3
SGA_v2.0_scaffold53G19364 Striga asiatica HOM05D004646 ORTHO05D005829 9.5e-32 139.8 78 91.0
THA.LOC104801795 Tarenaya hassleriana HOM05D004646 ORTHO05D005829 9.5e-32 139.8 78 89.7
CDE09G0693 Ceratophyllum demersum HOM05D004646 ORTHO05D005829 1.2e-31 139.4 78 88.5
Zm00001eb312490 Zea mays HOM05D004646 ORTHO05D005829 1.2e-31 139.4 78 87.2
HanXRQChr12g0362151 Helianthus annuus HOM05D004646 ORTHO05D005829 1.6e-31 139.0 79 84.8
SalBow2G3250 Salvia bowleyana HOM05D004646 ORTHO05D005829 2.8e-31 138.3 77 90.9
CAN.G58.23 Capsicum annuum HOM05D004646 ORTHO05D005829 3.6e-31 137.9 77 87.0
Lsat_1_v5_gn_8_53300 Lactuca sativa HOM05D004646 ORTHO05D005829 3.6e-31 137.9 79 84.8
Oeu055120.1 Olea europaea HOM05D004646 ORTHO05D005829 3.6e-31 137.9 79 87.3
CSS0046070 Camellia sinensis var. sinensis HOM05D004646 ORTHO05D005829 4.7e-31 137.5 79 86.1
TPR.G8663 Trifolium pratense HOM05D004646 ORTHO05D005829 4.7e-31 137.5 79 87.3
DCAR_027410 Daucus carota HOM05D004646 ORTHO05D005829 6.2e-31 137.1 79 83.5
ATR0564G518 Amborella trichopoda HOM05D004646 ORTHO05D005829 1.4e-30 136.0 79 82.3
Lalb_Chr09g0329301 Lupinus albus HOM05D004646 ORTHO05D005829 1.4e-30 136.0 77 89.6
Sp1g12620 Schrenkiella parvula HOM05D004646 ORTHO05D005829 1.4e-30 136.0 78 84.6
PSO832G2587 Papaver somniferum HOM05D004646 ORTHO05D005829 2.3e-30 135.2 78 84.6
AL1G26150 Arabidopsis lyrata HOM05D004646 ORTHO05D005829 3.1e-30 134.8 78 82.1
Cc11_g13050 Coffea canephora HOM05D004646 ORTHO05D005829 3.1e-30 134.8 79 81.0
Thhalv10008130m.g Eutrema salsugineum HOM05D004646 ORTHO05D005829 3.1e-30 134.8 78 82.1
Aa31LG1G790 Aethionema arabicum HOM05D004646 ORTHO05D005829 4.0e-30 134.4 78 82.1
AT1G14270 Arabidopsis thaliana HOM05D004646 ORTHO05D005829 8.9e-30 133.3 78 80.8
PSO063G0788 Papaver somniferum HOM05D004646 ORTHO05D005829 1.2e-29 132.9 78 83.3
BraA08t35124Z Brassica rapa HOM05D004646 ORTHO05D005829 1.5e-29 132.5 79 78.5
Carub.0001s1395 Capsella rubella HOM05D004646 ORTHO05D005829 1.5e-29 132.5 78 80.8
Migut.L01300 Erythranthe guttata HOM05D004646 ORTHO05D005829 1.5e-29 132.5 78 82.1
BcaC05g25320 Brassica carinata HOM05D004646 ORTHO05D005829 2.0e-29 132.1 76 82.9
C05p12020 Brassica napus HOM05D004646 ORTHO05D005829 2.0e-29 132.1 76 82.9
BolC5t29957H Brassica oleracea HOM05D004646 ORTHO05D005829 2.0e-29 132.1 76 82.9
BcaC07g38729 Brassica carinata HOM05D004646 ORTHO05D005829 2.6e-29 131.7 79 78.5
BolC8t49284H Brassica oleracea HOM05D004646 ORTHO05D005829 2.6e-29 131.7 79 78.5
Zm00001eb041360 Zea mays HOM05D004646 ORTHO05D005829 2.6e-29 131.7 78 82.1
A06p10240 Brassica napus HOM05D004646 ORTHO05D005829 4.4e-29 131.0 76 81.6
BraA06t24207Z Brassica rapa HOM05D004646 ORTHO05D005829 4.4e-29 131.0 76 81.6
vmacro01257 Vaccinium macrocarpon HOM05D004646 ORTHO05D005829 4.4e-29 131.0 85 80.0
BcaB03g13106 Brassica carinata HOM05D004646 ORTHO05D005829 7.5e-29 130.2 79 77.2
C08p16560 Brassica napus HOM05D004646 ORTHO05D005829 1.3e-28 129.4 79 77.2
Migut.L01298 Erythranthe guttata HOM05D004646 ORTHO05D005829 8.3e-28 126.7 77 77.9
HPP92_027580 Vanilla planifolia HOM05D004646 ORTHO05D005829 4.6e-26 120.9 77 75.3
AagrBONN_evm.TU.Sc2ySwM_228.1869 Anthoceros agrestis HOM05D004646 ORTHO05D005829 6.0e-26 120.6 76 76.3
Cpa.g.sc128.19 Carica papaya HOM05D004646 ORTHO05D005829 7.8e-26 120.2 66 92.4
Dinv16641 Davidia involucrata HOM05D004646 ORTHO05D005829 7.8e-26 120.2 66 90.9
MBI05_g08286_MAGBIO Magnolia biondii HOM05D004646 ORTHO05D005829 1.1e-24 116.3 66 89.4
Mapoly0033s0092 Marchantia polymorpha HOM05D004646 ORTHO05D005829 1.1e-24 116.3 76 76.3
Rhsim12G0063600 Rhododendron simsii HOM05D004646 ORTHO05D005829 1.9e-24 115.5 69 82.6
arahy.Tifrunner.gnm1.ann1.33WNW9 Arachis hypogaea HOM05D004646 ORTHO05D005829 4.7e-23 110.9 69 81.2
Pp3c21_22610 Physcomitrium patens HOM05D004646 ORTHO05D005829 1.1e-22 109.8 76 71.1
Lj2g0013736 Lotus japonicus HOM05D004646 ORTHO05D005829 2.0e-21 105.5 76 73.7
CBR_g52133 Chara braunii HOM05D004646 ORTHO05D005829 3.4e-21 104.8 76 65.8
arahy.Tifrunner.gnm1.ann1.PSIG0Y Arachis hypogaea HOM05D004646 ORTHO05D005829 9.9e-21 103.2 73 71.2
ATR0307G135 Amborella trichopoda HOM05D004646 ORTHO05D005829 4.9e-20 100.9 73 64.4
Lj2g0003230 Lotus japonicus HOM05D004646 ORTHO05D005829 4.9e-20 100.9 67 79.1
A08p32030 Brassica napus HOM05D004646 ORTHO05D005829 7.1e-19 97.1 95 55.8
SMO007G0001 Selaginella moellendorffii HOM05D004646 ORTHO05D005829 2.7e-18 95.1 67 67.2
SMO200G0049 Selaginella moellendorffii HOM05D004646 ORTHO05D005829 2.7e-18 95.1 67 67.2
QL03p063041 Quercus lobata HOM05D004646 ORTHO05D005829 4.6e-18 94.4 74 70.3
TAR629G0643 Trochodendron aralioides HOM05D004646 ORTHO05D005829 1.1e-16 89.7 74 58.1
PSO384G3479 Papaver somniferum HOM05D004646 ORTHO05D005829 8.1e-15 83.6 72 54.2
PSO767G0002 Papaver somniferum HOM05D004646 ORTHO05D005829 8.1e-15 83.6 72 54.2
CDE04G3684 Ceratophyllum demersum HOM05D004646 ORTHO05D005829 1.8e-14 82.4 76 51.3
Migut.L01299 Erythranthe guttata HOM05D004646 ORTHO05D005829 3.1e-14 81.6 64 64.1
Nn1g09141 Nelumbo nucifera HOM05D004646 ORTHO05D005829 8.9e-14 80.1 74 48.6
PRCOL_00002500 Prasinoderma coloniale HOM05D004646 ORTHO05D005829 8.9e-14 80.1 77 48.1
Cre06.g310050 Chlamydomonas reinhardtii HOM05D004646 ORTHO05D005829 7.6e-13 77.0 76 50.0
Aa31sc1802G10 Aethionema arabicum HOM05D004646 ORTHO05D005829 1.1e-08 63.2 39 74.4
Hund05883 Selenicereus undatus HOM05D004646 ORTHO05D005829 2.8e-07 58.5 31 93.5
MD09G1249200 Malus domestica HOM05D005443 ORTHO05D009021 1.1e-06 56.6 60 51.7
CANSAT78G0275 Cannabis sativa HOM05D005443 ORTHO05D009021 1.4e-06 56.2 61 45.9
MBI19_g23695_MAGBIO Magnolia biondii HOM05D001349 ORTHO05D241112 5.2e-06 54.3 37 67.6
Gohir.A13G055900 Gossypium hirsutum HOM05D005443 ORTHO05D009021 9.0e-06 53.5 60 53.3


User provided reference genes

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