Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p062170 Quercus lobata HOM05D006231 ORTHO05D007857 1.5e-167 592.8 315 100.0
CiPaw.05G148900 Carya illinoinensis HOM05D006231 ORTHO05D007857 6.1e-124 448.0 318 79.6
Cfa009127 Carpinus fangiana HOM05D006231 ORTHO05D007857 5.7e-122 441.4 316 74.7
CSS0044234 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 5.2e-107 391.7 318 67.6
Prupe.1G258300 Prunus persica HOM05D006231 ORTHO05D007857 7.5e-106 387.9 352 68.5
CSS0002380 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 4.9e-105 385.2 318 66.7
Haze_12158 Corylus avellana HOM05D006231 ORTHO05D007857 1.1e-104 384.0 236 82.2
Gohir.D05G320900 Gossypium hirsutum HOM05D006231 ORTHO05D007857 1.2e-103 380.6 319 64.9
Gorai.009G344200 Gossypium raimondii HOM05D006231 ORTHO05D007857 1.6e-103 380.2 319 64.6
MD16G1088300 Malus domestica HOM05D006231 ORTHO05D007857 2.7e-103 379.4 342 65.2
TAR629G0133 Trochodendron aralioides HOM05D006231 ORTHO05D007857 4.6e-103 378.6 324 67.3
MD13G1088000 Malus domestica HOM05D006231 ORTHO05D007857 7.8e-103 377.9 356 65.4
Manes.01G197500 Manihot esculenta HOM05D006231 ORTHO05D007857 1.7e-102 376.7 332 64.5
ClCG05G025120 Citrullus lanatus HOM05D006231 ORTHO05D007857 5.0e-102 375.2 286 67.8
Thecc.02G247800 Theobroma cacao HOM05D006231 ORTHO05D007857 5.0e-102 375.2 313 65.8
RcHm_v2.0_Chr4g0444351 Rosa chinensis HOM05D006231 ORTHO05D007857 1.1e-101 374.0 332 66.3
FvH4_4g34910 Fragaria vesca HOM05D006231 ORTHO05D007857 2.5e-101 372.9 327 66.7
Dinv24894 Davidia involucrata HOM05D006231 ORTHO05D007857 4.3e-101 372.1 309 65.7
Gohir.A05G318600 Gossypium hirsutum HOM05D006231 ORTHO05D007857 4.3e-101 372.1 319 64.3
TWI36G0577 Tripterygium wilfordii HOM05D006231 ORTHO05D007857 3.6e-100 369.0 319 61.4
CANSAT01G1818 Cannabis sativa HOM05D006231 ORTHO05D007857 4.7e-100 368.6 321 68.8
PGSC0003DMG400004132 Solanum tuberosum HOM05D006231 ORTHO05D007857 1.8e-99 366.7 317 64.0
Duzib248G0169 Durio zibethinus HOM05D006231 ORTHO05D007857 6.8e-99 364.8 318 63.2
Ciclev10032202m.g Citrus clementina HOM05D006231 ORTHO05D007857 8.9e-99 364.4 316 62.7
THA.LOC104822056 Tarenaya hassleriana HOM05D006231 ORTHO05D007857 1.2e-98 364.0 307 65.5
CsaV3_5G031780 Cucumis sativus L. HOM05D006231 ORTHO05D007857 2.0e-98 363.2 299 63.9
Nitab4.5_0001474g0130 Nicotiana tabacum HOM05D006231 ORTHO05D007857 5.8e-98 361.7 318 59.7
Nitab4.5_0004963g0030 Nicotiana tabacum HOM05D006231 ORTHO05D007857 5.8e-98 361.7 318 59.7
FAN12G2615 Fragaria x ananassa HOM05D006231 ORTHO05D007857 7.5e-98 361.3 318 66.4
Atru.chr11.1975 Acer truncatum HOM05D006231 ORTHO05D007857 1.3e-97 360.5 328 64.3
MELO3C012017.2 Cucumis melo HOM05D006231 ORTHO05D007857 1.3e-97 360.5 302 63.6
Hma1.2p1_1017F.1_g248270 Hydrangea macrophylla HOM05D006231 ORTHO05D007857 2.9e-97 359.4 323 62.5
Sed0009573 Sechium edule HOM05D006231 ORTHO05D007857 2.9e-97 359.4 299 61.9
COL.COLO4_19536 Corchorus olitorius HOM05D006231 ORTHO05D007857 4.9e-97 358.6 318 63.5
Gohir.D02G165000 Gossypium hirsutum HOM05D006231 ORTHO05D007857 4.9e-97 358.6 316 62.7
CAN.G505.18 Capsicum annuum HOM05D006231 ORTHO05D007857 1.4e-96 357.1 312 62.2
THA.LOC104822957 Tarenaya hassleriana HOM05D006231 ORTHO05D007857 1.4e-96 357.1 297 64.0
Sopen05g001920 Solanum pennellii HOM05D006231 ORTHO05D007857 1.9e-96 356.7 317 62.5
AL1G37790 Arabidopsis lyrata HOM05D006231 ORTHO05D007857 4.1e-96 355.5 321 59.5
Aa31LG7G7830 Aethionema arabicum HOM05D006231 ORTHO05D007857 9.2e-96 354.4 322 62.4
arahy.Tifrunner.gnm1.ann1.FQS9XH Arachis hypogaea HOM05D006231 ORTHO05D007857 3.5e-95 352.4 317 62.8
Nn4g22867 Nelumbo nucifera HOM05D006231 ORTHO05D007857 3.5e-95 352.4 329 60.5
arahy.Tifrunner.gnm1.ann1.XK2UET Arachis hypogaea HOM05D006231 ORTHO05D007857 4.6e-95 352.1 320 61.2
FAN07G0090 Fragaria x ananassa HOM05D006231 ORTHO05D007857 7.8e-95 351.3 332 64.2
Eucgr.B02548 Eucalyptus grandis HOM05D006231 ORTHO05D007857 2.3e-94 349.7 244 72.5
FAN22G0458 Fragaria x ananassa HOM05D006231 ORTHO05D007857 3.0e-94 349.4 339 61.7
Thhalv10008192m.g Eutrema salsugineum HOM05D006231 ORTHO05D007857 5.0e-94 348.6 324 58.0
FAN17G2958 Fragaria x ananassa HOM05D006231 ORTHO05D007857 1.1e-93 347.4 332 62.7
AT1G24040 Arabidopsis thaliana HOM05D006231 ORTHO05D007857 1.5e-93 347.1 322 58.7
Lalb_Chr09g0326451 Lupinus albus HOM05D006231 ORTHO05D007857 1.9e-93 346.7 312 64.4
Potri.008G146000 Populus trichocarpa HOM05D006231 ORTHO05D007857 5.6e-93 345.1 332 61.4
Carub.0001s2346 Capsella rubella HOM05D006231 ORTHO05D007857 7.3e-93 344.7 325 57.8
Sp1g21370 Schrenkiella parvula HOM05D006231 ORTHO05D007857 1.2e-92 344.0 320 57.2
Lj2g0015887 Lotus japonicus HOM05D006231 ORTHO05D007857 1.6e-92 343.6 324 62.3
vmacro16274 Vaccinium macrocarpon HOM05D006231 ORTHO05D007857 1.4e-91 340.5 295 65.4
CARHR024340 Cardamine hirsuta HOM05D006231 ORTHO05D007857 1.8e-91 340.1 332 57.5
Potri.010G095800 Populus trichocarpa HOM05D006231 ORTHO05D007857 1.8e-91 340.1 331 59.8
Actinidia15012 Actinidia chinensis HOM05D006231 ORTHO05D007857 6.8e-91 338.2 322 58.7
Cc11_g14350 Coffea canephora HOM05D006231 ORTHO05D007857 8.9e-91 337.8 326 55.5
BcaC05g26301 Brassica carinata HOM05D006231 ORTHO05D007857 3.4e-90 335.9 245 67.8
C05p23180 Brassica napus HOM05D006231 ORTHO05D007857 3.4e-90 335.9 245 67.8
BolC5t31019H Brassica oleracea HOM05D006231 ORTHO05D007857 3.4e-90 335.9 245 67.8
BcaB07g32378 Brassica carinata HOM05D006231 ORTHO05D007857 4.4e-90 335.5 333 57.4
PGR119G0912 Punica granatum HOM05D006231 ORTHO05D007857 6.4e-89 331.6 288 59.4
Oeu046714.1 Olea europaea HOM05D006231 ORTHO05D007857 1.1e-88 330.9 329 56.2
Psat2g109920 Pisum sativum HOM05D006231 ORTHO05D007857 1.1e-88 330.9 316 56.6
Peaxi162Scf00421g00419 Petunia axillaris HOM05D006231 ORTHO05D007857 2.7e-87 326.2 312 57.1
Aqoxy3G00933 Aquilegia oxysepala HOM05D006231 ORTHO05D007857 1.0e-86 324.3 318 58.8
Glyma.01G034200 Glycine max HOM05D006231 ORTHO05D007857 1.6e-84 317.0 240 67.1
Ca_04621_v3 Cicer arietinum L. HOM05D006231 ORTHO05D007857 2.1e-84 316.6 316 58.9
MSTRG.613 Avicennia marina HOM05D006231 ORTHO05D007857 8.1e-84 314.7 240 65.8
CSS0037524 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 1.1e-83 314.3 315 58.1
A09p40810 Brassica napus HOM05D006231 ORTHO05D007857 4.0e-83 312.4 245 63.7
BraA09t39576Z Brassica rapa HOM05D006231 ORTHO05D007857 4.0e-83 312.4 245 63.7
PSO478G5064 Papaver somniferum HOM05D006231 ORTHO05D007857 1.2e-82 310.8 322 53.7
PSO017G5161 Papaver somniferum HOM05D006231 ORTHO05D007857 1.3e-81 307.4 324 53.1
TPR.G4354 Trifolium pratense HOM05D006231 ORTHO05D007857 1.3e-81 307.4 279 60.9
Sabra10G0068400 Salix brachista HOM05D006231 ORTHO05D007857 2.9e-81 306.2 370 48.1
Lsat_1_v5_gn_8_158260 Lactuca sativa HOM05D006231 ORTHO05D007857 3.8e-81 305.8 303 57.8
Glyma.02G032100 Glycine max HOM05D006231 ORTHO05D007857 1.9e-80 303.5 242 66.9
Migut.L01438 Erythranthe guttata HOM05D006231 ORTHO05D007857 9.2e-80 301.2 238 64.3
SalBow2G0481 Salvia bowleyana HOM05D006231 ORTHO05D007857 9.2e-80 301.2 226 66.4
Hund25325 Selenicereus undatus HOM05D006231 ORTHO05D007857 1.6e-79 300.4 316 54.1
EL10Ac6g13629 Beta vulgaris HOM05D006231 ORTHO05D007857 7.8e-79 298.1 313 54.6
AUR62005324 Chenopodium quinoa HOM05D006231 ORTHO05D007857 1.0e-78 297.7 315 53.0
Rhsim12G0123300 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.0e-78 297.7 288 56.9
Sc11g0001330 Simmondsia chinensis HOM05D006231 ORTHO05D007857 1.7e-78 297.0 315 53.0
ECA233G1652 Erigeron canadensis HOM05D006231 ORTHO05D007857 3.9e-78 295.8 303 55.8
HanXRQChr08g0208971 Helianthus annuus HOM05D006231 ORTHO05D007857 3.9e-78 295.8 303 58.7
Medtr5g035060 Medicago truncatula HOM05D006231 ORTHO05D007857 3.9e-78 295.8 314 54.5
Lj3A1049T58 Lonicera japonica HOM05D006231 ORTHO05D007857 4.7e-76 288.9 260 61.5
Gorai.005G184900 Gossypium raimondii HOM05D006231 ORTHO05D007857 2.4e-75 286.6 316 54.7
AUR62013974 Chenopodium quinoa HOM05D006231 ORTHO05D007857 4.0e-75 285.8 313 52.4
Ah.03g132450 Amaranthus hybridus HOM05D006231 ORTHO05D007857 3.4e-74 282.7 219 64.4
unitig_22.g6476 Utricularia gibba HOM05D006231 ORTHO05D007857 5.8e-74 282.0 225 61.8
DCAR_024529 Daucus carota HOM05D006231 ORTHO05D007857 8.4e-73 278.1 203 67.0
VMungo1215G3085 Vigna mungo HOM05D006231 ORTHO05D007857 1.1e-72 277.7 320 50.3
Phvul.002G073400 Phaseolus vulgaris HOM05D006231 ORTHO05D007857 1.4e-72 277.3 311 52.4
Sabra08G0111000 Salix brachista HOM05D006231 ORTHO05D007857 7.1e-72 275.0 197 69.0
CDE10G0954 Ceratophyllum demersum HOM05D006231 ORTHO05D007857 4.8e-68 262.3 238 56.7
MBI15_g12952_MAGBIO Magnolia biondii HOM05D006231 ORTHO05D007857 8.1e-68 261.5 289 50.5
SGA_v2.0_scaffold166G38349 Striga asiatica HOM05D006231 ORTHO05D007857 7.6e-66 255.0 369 44.2
CDE10G0637 Ceratophyllum demersum HOM05D006231 ORTHO05D007857 2.5e-61 240.0 200 60.0
Medtr5g035040 Medicago truncatula HOM05D006231 ORTHO05D007857 6.9e-59 231.9 236 53.8
GSVIVG01020181001 Vitis vinifera HOM05D006231 ORTHO05D007857 2.2e-57 226.9 156 71.8
SEGI_07841 Sequoiadendron giganteum HOM05D006231 ORTHO05D007857 2.4e-56 223.4 217 53.9
ATR1149G099 Amborella trichopoda HOM05D006231 ORTHO05D007857 3.2e-56 223.0 188 61.7
Gohir.A03G141850 Gossypium hirsutum HOM05D006231 ORTHO05D007857 5.5e-56 222.2 227 56.4
Solyc05g005890.2 Solanum lycopersicum HOM05D006231 ORTHO05D007857 8.7e-54 214.9 142 75.4
HPP92_010904 Vanilla planifolia HOM05D006231 ORTHO05D007857 8.7e-54 214.9 221 52.5
Zm00001eb424460 Zea mays HOM05D006231 ORTHO05D007857 8.2e-52 208.4 233 49.8
Psat2g109880 Pisum sativum HOM05D006231 ORTHO05D007857 5.8e-50 202.2 231 49.4
Os04g0465500 Oryza sativa ssp. japonica HOM05D006231 ORTHO05D007857 1.2e-47 194.5 229 49.8
SEGI_36756 Sequoiadendron giganteum HOM05D006231 ORTHO05D007857 2.3e-46 190.3 217 48.4
Zm00001eb348680 Zea mays HOM05D006231 ORTHO05D007857 1.0e-41 174.9 233 44.6
Pp3c2_6130 Physcomitrium patens HOM05D006231 ORTHO05D007857 1.9e-40 170.6 213 45.5
Pp3c2_6132 Physcomitrium patens HOM05D006231 ORTHO05D007857 1.9e-40 170.6 213 45.5
Mapoly0005s0071 Marchantia polymorpha HOM05D006231 ORTHO05D007857 1.0e-38 164.9 213 44.1
SMO365G0079 Selaginella moellendorffii HOM05D006231 ORTHO05D007857 9.4e-32 141.7 205 40.0
CBR_g40430 Chara braunii HOM05D017800 ORTHO05D019665 9.7e-29 131.7 211 37.9
Medtr5g035050 Medicago truncatula HOM05D006231 ORTHO05D007857 1.8e-27 127.5 86 73.3
Dinv31098 Davidia involucrata HOM05D006231 ORTHO05D007857 9.1e-27 125.2 100 68.0
AagrBONN_evm.TU.Sc2ySwM_368.2752 Anthoceros agrestis HOM05D006231 ORTHO05D007857 3.8e-25 119.8 188 41.0
TAR622G0489 Trochodendron aralioides HOM05D006231 ORTHO05D007857 9.7e-13 78.6 84 54.8
Cre10.g464750 Chlamydomonas reinhardtii HOM05D006231 ORTHO05D007857 2.1e-07 60.8 247 21.1


User provided reference genes

Program Settings