Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p061749 Quercus lobata HOM05D003615 ORTHO05D004858 9.1e-190 666.8 341 100.0
QL03p061743 Quercus lobata HOM05D003615 ORTHO05D004858 2.2e-119 433.0 341 67.4
QL03p061724 Quercus lobata HOM05D003615 ORTHO05D004858 4.6e-109 398.7 337 65.0
Duzib268G1044 Durio zibethinus HOM05D003615 ORTHO05D004858 5.8e-96 355.1 326 58.3
CiPaw.05G146700 Carya illinoinensis HOM05D003615 ORTHO05D004858 3.2e-94 349.4 334 59.3
Haze_12144 Corylus avellana HOM05D003615 ORTHO05D004858 3.2e-94 349.4 332 59.6
Cfa009107 Carpinus fangiana HOM05D003615 ORTHO05D004858 1.6e-93 347.1 327 59.9
Atru.chr11.2003 Acer truncatum HOM05D003615 ORTHO05D004858 7.6e-88 328.2 321 55.5
COL.COLO4_36979 Corchorus olitorius HOM05D003615 ORTHO05D004858 2.7e-85 319.7 346 53.2
Glyma.18G137000 Glycine max HOM05D003615 ORTHO05D004858 2.5e-78 296.6 343 47.5
CiPaw.06G074200 Carya illinoinensis HOM05D003615 ORTHO05D004858 1.6e-77 293.9 340 52.4
Phvul.003G052700 Phaseolus vulgaris HOM05D003615 ORTHO05D004858 3.0e-76 289.7 327 47.4
Prupe.1G255700 Prunus persica HOM05D003615 ORTHO05D004858 1.1e-75 287.7 337 50.1
VMungo0251G0576 Vigna mungo HOM05D003615 ORTHO05D004858 2.0e-75 287.0 330 47.6
Duzib251G0695 Durio zibethinus HOM05D003615 ORTHO05D004858 2.8e-74 283.1 332 46.4
Lj4g0014300 Lotus japonicus HOM05D003615 ORTHO05D004858 7.7e-72 275.0 330 48.2
Prupe.1G255600 Prunus persica HOM05D003615 ORTHO05D004858 5.0e-71 272.3 321 50.2
TAR629G1076 Trochodendron aralioides HOM05D003615 ORTHO05D004858 1.9e-70 270.4 342 46.8
MD16G1090600 Malus domestica HOM05D003615 ORTHO05D004858 9.4e-70 268.1 338 47.0
TAR374G0689 Trochodendron aralioides HOM05D003615 ORTHO05D004858 9.4e-70 268.1 327 48.9
Medtr8g063930 Medicago truncatula HOM05D003615 ORTHO05D004858 2.1e-69 266.9 327 47.1
TAR629G2286 Trochodendron aralioides HOM05D003615 ORTHO05D004858 2.7e-69 266.5 334 47.0
MD13G1090000 Malus domestica HOM05D003615 ORTHO05D004858 8.8e-68 261.5 339 44.2
FAN22G1692 Fragaria x ananassa HOM05D003615 ORTHO05D004858 3.3e-67 259.6 324 46.9
FvH4_4g34740 Fragaria vesca HOM05D003615 ORTHO05D004858 1.3e-66 257.7 324 46.9
FAN12G2508 Fragaria x ananassa HOM05D003615 ORTHO05D004858 3.7e-66 256.1 327 46.5
RcHm_v2.0_Chr4g0444081 Rosa chinensis HOM05D003615 ORTHO05D004858 6.3e-66 255.4 321 46.1
Psat4g124720 Pisum sativum HOM05D003615 ORTHO05D004858 3.1e-65 253.1 328 46.0
RcHm_v2.0_Chr3g0476381 Rosa chinensis HOM05D003615 ORTHO05D004858 4.1e-65 252.7 321 45.8
Glyma.08G134200 Glycine max HOM05D003615 ORTHO05D004858 5.3e-65 252.3 332 44.9
RcHm_v2.0_Chr4g0444101 Rosa chinensis HOM05D003615 ORTHO05D004858 5.3e-65 252.3 327 45.6
Lj4g0011563 Lotus japonicus HOM05D003615 ORTHO05D004858 9.1e-65 251.5 367 42.2
FvH4_6g20500 Fragaria vesca HOM05D003615 ORTHO05D004858 3.5e-64 249.6 321 45.5
VMungo0251G2176 Vigna mungo HOM05D003615 ORTHO05D004858 4.5e-64 249.2 336 43.8
Thecc.02G244900 Theobroma cacao HOM05D003615 ORTHO05D004858 7.7e-64 248.4 330 45.2
CANSAT01G1820 Cannabis sativa HOM05D003615 ORTHO05D004858 1.7e-63 247.3 331 48.3
FAN07G2164 Fragaria x ananassa HOM05D003615 ORTHO05D004858 5.0e-63 245.7 323 45.5
Rhsim12G0121500 Rhododendron simsii HOM05D002725 ORTHO05D003279 1.9e-62 243.8 336 45.2
CiPaw.06G074300 Carya illinoinensis HOM05D003615 ORTHO05D004858 2.5e-62 243.4 341 46.0
FAN22G0583 Fragaria x ananassa HOM05D003615 ORTHO05D004858 7.2e-62 241.9 333 42.9
arahy.Tifrunner.gnm1.ann1.1EVC3W Arachis hypogaea HOM05D003615 ORTHO05D004858 1.6e-61 240.7 342 43.0
FAN16G0215 Fragaria x ananassa HOM05D003615 ORTHO05D004858 2.1e-61 240.4 331 45.6
arahy.Tifrunner.gnm1.ann1.2199FB Arachis hypogaea HOM05D003615 ORTHO05D004858 4.7e-61 239.2 347 43.5
FvH4_4g34710 Fragaria vesca HOM05D003615 ORTHO05D004858 1.0e-60 238.0 333 43.2
FAN12G0428 Fragaria x ananassa HOM05D003615 ORTHO05D004858 1.4e-60 237.7 333 43.2
FAN17G0861 Fragaria x ananassa HOM05D003615 ORTHO05D004858 3.0e-60 236.5 324 43.5
Aqoxy3G03028 Aquilegia oxysepala HOM05D003615 ORTHO05D004858 4.0e-60 236.1 323 42.4
Psat7g055960 Pisum sativum HOM05D003615 ORTHO05D004858 4.0e-60 236.1 344 42.2
FAN02G2149 Fragaria x ananassa HOM05D003615 ORTHO05D004858 5.2e-60 235.7 323 45.2
Prupe.1G255400 Prunus persica HOM05D003615 ORTHO05D004858 5.2e-60 235.7 332 43.7
Glyma.08G288200 Glycine max HOM05D003615 ORTHO05D004858 1.2e-59 234.6 300 45.3
Lj4g0013299 Lotus japonicus HOM05D003615 ORTHO05D004858 1.2e-59 234.6 340 42.6
TPR.G29246 Trifolium pratense HOM05D003615 ORTHO05D004858 1.2e-59 234.6 322 44.4
Duzib268G1684 Durio zibethinus HOM05D003615 ORTHO05D004858 3.3e-59 233.0 322 44.4
Phvul.002G257500 Phaseolus vulgaris HOM05D003615 ORTHO05D004858 5.3e-57 225.7 293 45.7
TPR.G6213 Trifolium pratense HOM05D003615 ORTHO05D004858 6.5e-55 218.8 353 39.9
Medtr1g060280 Medicago truncatula HOM05D003615 ORTHO05D004858 1.5e-54 217.6 331 40.5
Eucgr.B03352 Eucalyptus grandis HOM05D003615 ORTHO05D004858 1.6e-53 214.2 327 39.4
Eucgr.B03351 Eucalyptus grandis HOM05D003615 ORTHO05D004858 2.0e-51 207.2 327 38.8
GSVIVG01004279001 Vitis vinifera HOM05D003615 ORTHO05D004858 3.7e-50 203.0 326 41.4
FAN14G2568 Fragaria x ananassa HOM05D003615 ORTHO05D004858 1.4e-49 201.1 254 46.5
Gohir.D04G178200 Gossypium hirsutum HOM05D003615 ORTHO05D004858 5.4e-49 199.1 319 38.2
Gorai.012G171300 Gossypium raimondii HOM05D003615 ORTHO05D004858 9.1e-49 198.4 319 38.2
Potri.006G262900 Populus trichocarpa HOM05D003615 ORTHO05D004858 9.1e-49 198.4 327 38.2
Gohir.A04G135100 Gossypium hirsutum HOM05D003615 ORTHO05D004858 2.0e-48 197.2 319 37.9
Hma1.2p1_0697F.1_g204790 Hydrangea macrophylla HOM05D003615 ORTHO05D004858 2.7e-48 196.8 326 39.9
Actinidia15034 Actinidia chinensis HOM05D003615 ORTHO05D004858 3.5e-48 196.4 221 46.6
Duzib147G1418 Durio zibethinus HOM05D003615 ORTHO05D004858 1.3e-47 194.5 331 40.5
FAN09G2044 Fragaria x ananassa HOM05D003615 ORTHO05D004858 5.0e-47 192.6 320 39.4
Gorai.012G060600 Gossypium raimondii HOM05D003615 ORTHO05D004858 1.9e-46 190.7 319 38.9
Thecc.04G007200 Theobroma cacao HOM05D003615 ORTHO05D004858 4.2e-46 189.5 332 38.9
COL.COLO4_04783 Corchorus olitorius HOM05D003615 ORTHO05D004858 1.2e-45 188.0 323 37.8
Gohir.A05G360200 Gossypium hirsutum HOM05D003615 ORTHO05D004858 6.1e-45 185.7 320 40.6
Sabra06G0205200 Salix brachista HOM05D000330 ORTHO05D004858 6.1e-45 185.7 342 35.4
FvH4_3g33230 Fragaria vesca HOM05D003615 ORTHO05D004858 8.0e-45 185.3 231 47.2
Gohir.D04G054000 Gossypium hirsutum HOM05D003615 ORTHO05D004858 1.0e-44 184.9 320 40.3
Dinv35046 Davidia involucrata HOM05D003615 ORTHO05D004858 6.8e-44 182.2 284 42.3
FAN14G3971 Fragaria x ananassa HOM05D003615 ORTHO05D004858 6.8e-44 182.2 208 48.6
FAN17G1254 Fragaria x ananassa HOM05D003615 ORTHO05D022686 5.7e-43 179.1 297 39.1
BolC5t30999H Brassica oleracea HOM05D003615 ORTHO05D004858 1.4e-41 174.5 362 33.1
CARHR024240 Cardamine hirsuta HOM05D003615 ORTHO05D004858 1.4e-41 174.5 354 33.9
Rhsim10G0023500 Rhododendron simsii HOM05D003615 ORTHO05D004858 2.4e-41 173.7 346 37.6
Nn4g22826 Nelumbo nucifera HOM05D003615 ORTHO05D004858 3.1e-41 173.3 326 37.7
AT1G23840 Arabidopsis thaliana HOM05D003615 ORTHO05D004858 7.0e-41 172.2 344 36.3
Ciclev10001867m.g Citrus clementina HOM05D003615 ORTHO05D004858 9.2e-41 171.8 323 38.1
BcaB07g32357 Brassica carinata HOM05D003615 ORTHO05D004858 2.0e-40 170.6 340 35.0
Carub.0001s2334 Capsella rubella HOM05D003615 ORTHO05D004858 4.5e-40 169.5 356 31.7
C05p23000 Brassica napus HOM05D003615 ORTHO05D004858 1.3e-39 167.9 341 34.9
Rhsim10G0023900 Rhododendron simsii HOM05D003615 ORTHO05D004858 1.3e-39 167.9 341 37.2
Eucgr.I01825 Eucalyptus grandis HOM05D003615 ORTHO05D004858 2.3e-39 167.2 340 36.8
AT1G23850 Arabidopsis thaliana HOM05D003615 ORTHO05D004858 3.8e-39 166.4 353 32.0
AL1G37600 Arabidopsis lyrata HOM05D003615 ORTHO05D004858 5.0e-39 166.0 355 33.0
FvH4_6g20520 Fragaria vesca HOM05D003615 ORTHO05D004858 5.0e-39 166.0 206 44.7
BcaC05g26288 Brassica carinata HOM05D003615 ORTHO05D004858 6.6e-39 165.6 343 35.0
FAN05G3998 Fragaria x ananassa HOM05D003615 ORTHO05D004858 8.6e-39 165.2 197 47.2
C05p23050 Brassica napus HOM05D003615 ORTHO05D004858 1.9e-38 164.1 352 33.2
PGR119G0743 Punica granatum HOM05D003615 ORTHO05D004858 1.6e-37 161.0 332 37.0
Eucgr.B03350 Eucalyptus grandis HOM05D003615 ORTHO05D004858 4.7e-37 159.5 316 36.7
BraA09t39593Z Brassica rapa HOM05D003615 ORTHO05D004858 8.0e-37 158.7 339 33.3
TAR622G0247 Trochodendron aralioides HOM05D003615 ORTHO05D004858 8.0e-37 158.7 335 35.2
THA.LOC104822136 Tarenaya hassleriana HOM05D003615 ORTHO05D004858 1.4e-36 157.9 357 31.4
AT1G23830 Arabidopsis thaliana HOM05D003615 ORTHO05D004858 1.8e-36 157.5 341 34.0
Medtr8g090020 Medicago truncatula HOM05D003615 ORTHO05D004858 1.8e-36 157.5 259 39.4
Lalb_Chr07g0185251 Lupinus albus HOM05D003615 ORTHO05D004858 3.0e-36 156.8 119 64.7
CARHR024250 Cardamine hirsuta HOM05D003615 ORTHO05D004858 5.2e-36 156.0 340 32.9
CARHR024230 Cardamine hirsuta HOM05D003615 ORTHO05D004858 1.5e-35 154.5 355 32.1
Sp1g21200 Schrenkiella parvula HOM05D003615 ORTHO05D004858 1.5e-35 154.5 363 31.7
TAR622G1321 Trochodendron aralioides HOM05D003615 ORTHO05D004858 2.6e-35 153.7 322 35.4
AL1G37580 Arabidopsis lyrata HOM05D003615 ORTHO05D004858 4.4e-35 152.9 350 31.7
Thecc.02G244700 Theobroma cacao HOM05D003615 ORTHO05D004858 4.4e-35 152.9 326 33.1
AUR62005358 Chenopodium quinoa HOM05D003615 ORTHO05D004858 9.8e-35 151.8 341 33.1
CsaV3_3G042230 Cucumis sativus L. HOM05D003615 ORTHO05D004858 1.7e-34 151.0 337 34.4
MELO3C009943.2 Cucumis melo HOM05D003615 ORTHO05D004858 2.2e-34 150.6 344 35.2
Atru.chr6.2153 Acer truncatum HOM05D003615 ORTHO05D004858 4.1e-33 146.4 335 33.7
A07p13760 Brassica napus HOM05D003615 ORTHO05D004858 9.2e-33 145.2 368 30.7
Carub.0001s2333 Capsella rubella HOM05D003615 ORTHO05D004858 2.0e-32 144.1 335 32.5
Eucgr.I01826 Eucalyptus grandis HOM05D003615 ORTHO05D004858 3.5e-32 143.3 323 34.7
CANSAT01G3275 Cannabis sativa HOM05D003615 ORTHO05D004858 1.7e-31 141.0 194 39.2
ClCG10G014370 Citrullus lanatus HOM05D003615 ORTHO05D004858 1.7e-31 141.0 338 34.3
MELO3C009942.2 Cucumis melo HOM05D003615 ORTHO05D004858 3.0e-31 140.2 327 33.0
BolC7t42544H Brassica oleracea HOM05D003615 ORTHO05D004858 6.6e-31 139.0 370 30.8
C07p20230 Brassica napus HOM05D003615 ORTHO05D004858 8.6e-31 138.7 360 31.1
BcaB03g14133 Brassica carinata HOM05D003615 ORTHO05D004858 1.1e-30 138.3 364 30.2
Thhalv10009999m.g Eutrema salsugineum HOM05D003615 ORTHO05D004858 1.1e-30 138.3 363 30.0
BcaC06g35055 Brassica carinata HOM05D003615 ORTHO05D004858 1.9e-30 137.5 370 31.1
CsaV3_3G042210 Cucumis sativus L. HOM05D003615 ORTHO05D004858 5.6e-30 136.0 332 31.9
Thhalv10008195m.g Eutrema salsugineum HOM05D003615 ORTHO05D004858 1.2e-29 134.8 336 31.2
EL10Ac6g13654 Beta vulgaris HOM05D003615 ORTHO05D004858 2.8e-29 133.7 327 31.8
BraA07t29125Z Brassica rapa HOM05D003615 ORTHO05D004858 2.8e-29 133.7 369 29.0
COL.COLO4_36978 Corchorus olitorius HOM05D003615 ORTHO05D004858 6.2e-29 132.5 116 54.3
Ah.03g132550 Amaranthus hybridus HOM05D003615 ORTHO05D004858 2.3e-28 130.6 252 37.7
Glyma.05G176900 Glycine max HOM05D003615 ORTHO05D004858 3.1e-28 130.2 225 38.7
A09p40990 Brassica napus HOM05D003615 ORTHO05D004858 6.8e-28 129.0 193 40.4
BcaB07g32359 Brassica carinata HOM05D003615 ORTHO05D004858 8.9e-28 128.6 293 33.4
Sed0019217 Sechium edule HOM05D003615 ORTHO05D004858 2.9e-26 123.6 347 30.5
ClCG10G014380 Citrullus lanatus HOM05D003615 ORTHO05D004858 3.2e-25 120.2 339 29.8
AUR62014010 Chenopodium quinoa HOM05D003615 ORTHO05D004858 7.0e-25 119.0 332 29.8
Dinv24874 Davidia involucrata HOM05D003615 ORTHO05D004858 2.3e-23 114.0 100 60.0
FAN11G1076 Fragaria x ananassa HOM05D003615 ORTHO05D004858 3.0e-23 113.6 242 36.8
Ah.03g132560 Amaranthus hybridus HOM05D003615 ORTHO05D004858 5.0e-23 112.8 219 34.2
MD16G1090500 Malus domestica HOM05D003615 ORTHO05D004858 5.0e-23 112.8 164 42.7
AUR62014008 Chenopodium quinoa HOM05D002682 ORTHO05D002878 2.5e-22 110.5 231 34.6
Eucgr.B03353 Eucalyptus grandis HOM05D003615 ORTHO05D015110 2.1e-21 107.5 319 30.1
Duzib251G0647 Durio zibethinus HOM05D003615 ORTHO05D004858 1.4e-20 104.8 112 50.0
AUR62005356 Chenopodium quinoa HOM05D003615 ORTHO05D004858 2.3e-20 104.0 134 43.3
Hund05979 Selenicereus undatus HOM05D003615 ORTHO05D004858 4.0e-20 103.2 205 37.1
AUR62014009 Chenopodium quinoa HOM05D003615 ORTHO05D004858 8.3e-18 95.5 134 42.5
Atru.chr6.2186 Acer truncatum HOM05D003615 ORTHO05D004858 1.9e-17 94.4 184 35.9
C07p20220 Brassica napus HOM05D003615 ORTHO05D004858 1.9e-17 94.4 242 30.6
BcaC06g35057 Brassica carinata HOM05D003615 ORTHO05D004858 4.1e-17 93.2 194 33.0
AL1G37590 Arabidopsis lyrata HOM05D003615 ORTHO05D004858 2.7e-16 90.5 337 24.9
Sc18g0001840 Simmondsia chinensis HOM05D003615 ORTHO05D004858 3.9e-15 86.7 252 28.6
FAN17G0045 Fragaria x ananassa HOM05D003615 ORTHO05D004858 7.3e-14 82.4 122 41.8
Duzib187G1117 Durio zibethinus HOM05D003615 ORTHO05D004858 1.6e-13 81.3 137 39.4
TAR374G0412 Trochodendron aralioides HOM05D002682 ORTHO05D002878 8.1e-13 79.0 134 35.1
Sed0025994 Sechium edule HOM05D000122 ORTHO05D000139 1.1e-12 78.6 293 25.9
FAN11G0954 Fragaria x ananassa HOM05D003615 ORTHO05D004858 1.8e-12 77.8 62 58.1
FvH4_4g34761 Fragaria vesca HOM05D003615 ORTHO05D015110 3.1e-12 77.0 314 26.4
FAN12G3114 Fragaria x ananassa HOM05D003615 ORTHO05D015110 3.1e-12 77.0 314 26.4
MD16G1090300 Malus domestica HOM05D003615 ORTHO05D015110 4.0e-12 76.6 313 26.8
Prupe.1G255800 Prunus persica HOM05D003615 ORTHO05D015110 4.0e-12 76.6 109 40.4
BolC5t31001H Brassica oleracea HOM05D003615 ORTHO05D016696 2.6e-11 73.9 84 40.5
PGR142G2932 Punica granatum HOM05D003615 ORTHO05D004858 4.4e-11 73.2 86 46.5
BcaC05g26284 Brassica carinata HOM05D003615 ORTHO05D004858 7.6e-11 72.4 113 38.9
BcaC05g26283 Brassica carinata HOM05D003615 ORTHO05D004858 9.9e-11 72.0 188 29.3
BraA09t39587Z Brassica rapa HOM05D003615 ORTHO05D004858 9.9e-11 72.0 188 29.3
Nn3g16919 Nelumbo nucifera HOM05D003615 ORTHO05D004858 1.3e-10 71.6 141 34.8
MD16G1090400 Malus domestica HOM05D003615 ORTHO05D015110 2.2e-10 70.9 317 28.7
FvH4_4g34760 Fragaria vesca HOM05D003615 ORTHO05D015110 4.9e-10 69.7 317 24.9
Thecc.02G244800 Theobroma cacao HOM05D003615 ORTHO05D004858 4.9e-10 69.7 137 36.5
FAN17G2861 Fragaria x ananassa HOM05D003615 ORTHO05D015110 8.4e-10 68.9 319 24.8
Eucgr.L03458 Eucalyptus grandis HOM05D003615 ORTHO05D004858 1.1e-09 68.6 93 41.9
FAN12G4087 Fragaria x ananassa HOM05D003615 ORTHO05D015110 1.9e-09 67.8 317 24.9
AUR62005357 Chenopodium quinoa HOM05D003615 ORTHO05D004858 3.2e-09 67.0 147 29.9
Ca_17751_v3 Cicer arietinum L. HOM05D002693 ORTHO05D007571 5.4e-09 66.2 52 55.8
FAN07G1344 Fragaria x ananassa HOM05D003615 ORTHO05D015110 1.2e-08 65.1 319 24.1
BolC7t42543H Brassica oleracea HOM05D003615 ORTHO05D004858 1.6e-08 64.7 88 39.8
FAN22G2348 Fragaria x ananassa HOM05D003615 ORTHO05D015110 1.9e-06 57.8 128 33.6
FAN17G2106 Fragaria x ananassa HOM05D003615 ORTHO05D015110 2.5e-06 57.4 209 27.8
FvH4_4g34711 Fragaria vesca HOM05D003615 ORTHO05D004858 5.6e-06 56.2 113 33.6
Rhsim10G0024000 Rhododendron simsii HOM05D003615 ORTHO05D004858 5.6e-06 56.2 151 34.4
FvH4_4g34730 Fragaria vesca HOM05D003615 ORTHO05D022686 7.3e-06 55.8 320 26.2


User provided reference genes

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