Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p059558 Quercus lobata HOM05D004391 ORTHO05D005193 2.5e-49 198.4 94 100.0
CiPaw.05G185700 Carya illinoinensis HOM05D004391 ORTHO05D005193 2.9e-29 131.7 94 69.1
Cfa009172 Carpinus fangiana HOM05D004391 ORTHO05D005193 4.9e-29 131.0 94 69.1
Nitab4.5_0003194g0030 Nicotiana tabacum HOM05D004391 ORTHO05D005193 5.5e-28 127.5 94 67.0
Nitab4.5_0000105g0300 Nicotiana tabacum HOM05D004391 ORTHO05D005193 7.1e-28 127.1 94 67.0
Oeu025053.1 Olea europaea HOM05D004391 ORTHO05D005193 7.1e-28 127.1 94 69.1
Peaxi162Scf00131g10129 Petunia axillaris HOM05D004391 ORTHO05D005193 7.1e-28 127.1 94 66.0
Eucgr.G03166 Eucalyptus grandis HOM05D004391 ORTHO05D005193 2.1e-27 125.6 94 68.1
PGR142G4161 Punica granatum HOM05D004391 ORTHO05D005193 2.1e-27 125.6 94 67.0
Potri.019G132000 Populus trichocarpa HOM05D004391 ORTHO05D005193 4.6e-27 124.4 94 66.0
Ciclev10033444m.g Citrus clementina HOM05D004391 ORTHO05D005193 6.0e-27 124.0 94 64.9
RcHm_v2.0_Chr5g0073771 Rosa chinensis HOM05D004391 ORTHO05D005193 6.0e-27 124.0 94 64.9
TWI53G1180 Tripterygium wilfordii HOM05D004391 ORTHO05D005193 6.0e-27 124.0 94 66.0
Solyc06g082680.4 Solanum lycopersicum HOM05D004391 ORTHO05D005193 7.9e-27 123.6 94 63.8
Sopen06g034070 Solanum pennellii HOM05D004391 ORTHO05D005193 7.9e-27 123.6 94 63.8
Haze_12207 Corylus avellana HOM05D004391 ORTHO05D005193 1.0e-26 123.2 94 66.0
TWI09G0083 Tripterygium wilfordii HOM05D004391 ORTHO05D005193 1.0e-26 123.2 94 66.0
Ciclev10010097m.g Citrus clementina HOM05D004391 ORTHO05D005193 1.3e-26 122.9 94 63.8
Prupe.6G038800 Prunus persica HOM05D004391 ORTHO05D005193 1.3e-26 122.9 94 68.1
PGSC0003DMG400030477 Solanum tuberosum HOM05D004391 ORTHO05D005193 1.8e-26 122.5 94 62.8
Nn5g27585 Nelumbo nucifera HOM05D004391 ORTHO05D005193 2.3e-26 122.1 94 67.0
Peaxi162Scf00455g00003 Petunia axillaris HOM05D004391 ORTHO05D005193 2.3e-26 122.1 94 63.8
CSS0038074 Camellia sinensis var. sinensis HOM05D004391 ORTHO05D005193 3.0e-26 121.7 94 64.9
BcaB01g05713 Brassica carinata HOM05D004391 ORTHO05D005193 6.7e-26 120.6 94 60.6
Dinv12291 Davidia involucrata HOM05D000139 ORTHO05D000103 6.7e-26 120.6 94 64.9
Solyc06g007540.3 Solanum lycopersicum HOM05D004391 ORTHO05D005193 6.7e-26 120.6 94 62.8
Sopen06g002450 Solanum pennellii HOM05D004391 ORTHO05D005193 6.7e-26 120.6 94 62.8
Cpa.g.sc2.267 Carica papaya HOM05D004391 ORTHO05D005193 8.7e-26 120.2 94 63.8
Ciclev10013576m.g Citrus clementina HOM05D004391 ORTHO05D005193 1.1e-25 119.8 94 62.8
HPP92_003137 Vanilla planifolia HOM05D004391 ORTHO05D005193 1.1e-25 119.8 94 63.8
Nitab4.5_0000311g0070 Nicotiana tabacum HOM05D004391 ORTHO05D005193 1.9e-25 119.0 94 61.7
unitig_747.g21439 Utricularia gibba HOM05D001024 ORTHO05D000878 1.9e-25 119.0 94 62.8
CAN.G874.64 Capsicum annuum HOM05D004391 ORTHO05D005193 2.5e-25 118.6 94 61.7
Cc01_g15470 Coffea canephora HOM05D004391 ORTHO05D005193 2.5e-25 118.6 94 61.7
Manes.18G125100 Manihot esculenta HOM05D004391 ORTHO05D005193 2.5e-25 118.6 94 63.8
Duzib128G1816 Durio zibethinus HOM05D004391 ORTHO05D005193 4.3e-25 117.9 94 63.8
TAR369G0568 Trochodendron aralioides HOM05D004391 ORTHO05D005193 4.3e-25 117.9 94 63.8
CAN.G181.27 Capsicum annuum HOM05D004391 ORTHO05D005193 5.6e-25 117.5 94 62.8
FvH4_3g40960 Fragaria vesca HOM05D004391 ORTHO05D005193 5.6e-25 117.5 94 60.6
FAN11G0346 Fragaria x ananassa HOM05D004391 ORTHO05D005193 5.6e-25 117.5 94 60.6
FAN16G3113 Fragaria x ananassa HOM05D004391 ORTHO05D005193 5.6e-25 117.5 94 60.6
CANSAT80G1344 Cannabis sativa HOM05D004391 ORTHO05D005193 7.4e-25 117.1 94 61.7
RcHm_v2.0_Chr4g0441891 Rosa chinensis HOM05D004391 ORTHO05D005193 7.4e-25 117.1 94 61.7
Sc15g0002370 Simmondsia chinensis HOM05D004391 ORTHO05D005193 7.4e-25 117.1 94 59.6
THA.LOC109117202 Tarenaya hassleriana HOM05D004391 ORTHO05D005193 7.4e-25 117.1 94 63.8
BcaC06g32250 Brassica carinata HOM05D004391 ORTHO05D005193 9.6e-25 116.7 94 59.6
A10p30830 Brassica napus HOM05D004391 ORTHO05D005193 9.6e-25 116.7 94 59.6
C09p71330 Brassica napus HOM05D004391 ORTHO05D005193 9.6e-25 116.7 94 59.6
BolC9t59895H Brassica oleracea HOM05D004391 ORTHO05D005193 9.6e-25 116.7 94 59.6
BraA10t45125Z Brassica rapa HOM05D004391 ORTHO05D005193 9.6e-25 116.7 94 59.6
Nn5g26793 Nelumbo nucifera HOM05D004391 ORTHO05D005193 9.6e-25 116.7 94 62.8
TAR633G0676 Trochodendron aralioides HOM05D004391 ORTHO05D005193 9.6e-25 116.7 94 63.8
GSVIVG01024232001 Vitis vinifera HOM05D004391 ORTHO05D005193 9.6e-25 116.7 94 61.7
CARHR207860 Cardamine hirsuta HOM05D004391 ORTHO05D005193 1.3e-24 116.3 94 58.5
Hma1.2p1_0170F.1_g075340 Hydrangea macrophylla HOM05D004391 ORTHO05D005193 1.3e-24 116.3 94 60.6
Prupe.1G250900 Prunus persica HOM05D004391 ORTHO05D005193 1.3e-24 116.3 94 62.8
HPP92_000080 Vanilla planifolia HOM05D004391 ORTHO05D005193 1.3e-24 116.3 93 62.4
Aa31LG11G6460 Aethionema arabicum HOM05D004391 ORTHO05D005193 1.6e-24 115.9 94 59.6
COL.COLO4_19488 Corchorus olitorius HOM05D004391 ORTHO05D005193 1.6e-24 115.9 94 64.9
Gohir.A13G008200 Gossypium hirsutum HOM05D004391 ORTHO05D005193 1.6e-24 115.9 94 61.7
Thhalv10015197m.g Eutrema salsugineum HOM05D004391 ORTHO05D005193 2.1e-24 115.5 94 58.5
MD13G1094500 Malus domestica HOM05D004391 ORTHO05D005193 2.1e-24 115.5 94 62.8
Aa31LG3G4110 Aethionema arabicum HOM05D004391 ORTHO05D005193 2.8e-24 115.2 104 56.7
Thhalv10015196m.g Eutrema salsugineum HOM05D004391 ORTHO05D005193 2.8e-24 115.2 94 59.6
FAN25G0672 Fragaria x ananassa HOM05D004391 ORTHO05D000090 2.8e-24 115.2 92 60.9
MD03G1047800 Malus domestica HOM05D004391 ORTHO05D005193 2.8e-24 115.2 94 61.7
THA.LOC104816504 Tarenaya hassleriana HOM05D004391 ORTHO05D005193 2.8e-24 115.2 94 62.8
THA.LOC104823167 Tarenaya hassleriana HOM05D004391 ORTHO05D005193 2.8e-24 115.2 94 61.7
Gohir.D13G008800 Gossypium hirsutum HOM05D004391 ORTHO05D005193 3.7e-24 114.8 94 60.6
Sp6g37450 Schrenkiella parvula HOM05D004391 ORTHO05D005193 3.7e-24 114.8 94 58.5
Aa31LG3G3850 Aethionema arabicum HOM05D004391 ORTHO05D005193 4.8e-24 114.4 94 59.6
Duzib114G0048 Durio zibethinus HOM05D004391 ORTHO05D005193 4.8e-24 114.4 94 61.7
Os06g0175900 Oryza sativa ssp. japonica HOM05D004391 ORTHO05D005193 4.8e-24 114.4 94 61.7
Os06g0177000 Oryza sativa ssp. japonica HOM05D004391 ORTHO05D005193 4.8e-24 114.4 94 61.7
MELO3C010670.2 Cucumis melo HOM05D004391 ORTHO05D005193 6.2e-24 114.0 94 59.6
MD16G1095600 Malus domestica HOM05D004391 ORTHO05D005193 6.2e-24 114.0 94 61.7
Sp6g37680 Schrenkiella parvula HOM05D004391 ORTHO05D005193 6.2e-24 114.0 94 57.4
A03p02270 Brassica napus HOM05D004391 ORTHO05D005193 8.2e-24 113.6 94 58.5
Glyma.14G206700 Glycine max HOM05D004391 ORTHO05D005193 8.2e-24 113.6 94 60.6
CSS0036971 Camellia sinensis var. sinensis HOM05D004391 ORTHO05D005193 1.1e-23 113.2 94 59.6
Carub.0006s0430 Capsella rubella HOM05D004391 ORTHO05D005193 1.1e-23 113.2 94 57.4
Nitab4.5_0002902g0130 Nicotiana tabacum HOM05D004391 ORTHO05D005193 1.1e-23 113.2 57 89.5
BolC1t05350H Brassica oleracea HOM05D004391 ORTHO05D005193 1.4e-23 112.8 94 57.4
Nitab4.5_0002167g0040 Nicotiana tabacum HOM05D004391 ORTHO05D005193 1.4e-23 112.8 57 87.7
SalBow3G4275 Salvia bowleyana HOM05D004391 ORTHO05D005193 1.8e-23 112.5 103 60.2
ClCG08G017940 Citrullus lanatus HOM05D004391 ORTHO05D005193 2.4e-23 112.1 94 58.5
FvH4_4g32870 Fragaria vesca HOM05D004391 ORTHO05D005193 2.4e-23 112.1 94 59.6
FAN12G3281 Fragaria x ananassa HOM05D004391 ORTHO05D005193 2.4e-23 112.1 94 59.6
Glyma.02G237700 Glycine max HOM05D004391 ORTHO05D005193 2.4e-23 112.1 94 59.6
Gohir.A05G404700 Gossypium hirsutum HOM05D004391 ORTHO05D005193 2.4e-23 112.1 94 59.6
Migut.D00804 Erythranthe guttata HOM05D004391 ORTHO05D005193 3.1e-23 111.7 94 61.7
Gohir.D04G011000 Gossypium hirsutum HOM05D004391 ORTHO05D005193 3.1e-23 111.7 94 59.6
GSVIVG01024535001 Vitis vinifera HOM05D004391 ORTHO05D005193 3.1e-23 111.7 94 58.5
FAN07G1869 Fragaria x ananassa HOM05D004391 ORTHO05D005193 4.0e-23 111.3 94 59.6
FAN17G0118 Fragaria x ananassa HOM05D004391 ORTHO05D005193 4.0e-23 111.3 94 59.6
FAN22G1549 Fragaria x ananassa HOM05D004391 ORTHO05D005193 4.0e-23 111.3 94 59.6
PGSC0003DMG400020649 Solanum tuberosum HOM05D004391 ORTHO05D005193 4.0e-23 111.3 57 86.0
AL6G15270 Arabidopsis lyrata HOM05D004391 ORTHO05D005193 5.3e-23 110.9 94 56.4
AT5G05370 Arabidopsis thaliana HOM05D004391 ORTHO05D005193 5.3e-23 110.9 94 56.4
BraA01t04219Z Brassica rapa HOM05D004391 ORTHO05D005193 5.3e-23 110.9 94 57.4
Thhalv10021877m.g Eutrema salsugineum HOM05D004391 ORTHO05D005193 5.3e-23 110.9 94 57.4
FAN21G2439 Fragaria x ananassa HOM05D004391 ORTHO05D005193 5.3e-23 110.9 94 58.5
Potri.013G159700 Populus trichocarpa HOM05D004391 ORTHO05D005193 5.3e-23 110.9 57 87.7
Zm00001eb375180 Zea mays HOM05D004391 ORTHO05D005193 9.0e-23 110.2 94 59.6
Phvul.008G244100 Phaseolus vulgaris HOM05D004391 ORTHO05D005193 1.2e-22 109.8 94 58.5
vmacro02862 Vaccinium macrocarpon HOM05D004391 ORTHO05D005193 1.2e-22 109.8 58 84.5
Sp3g09180 Schrenkiella parvula HOM05D004391 ORTHO05D005193 1.5e-22 109.4 94 56.4
arahy.Tifrunner.gnm1.ann1.M2MMUV Arachis hypogaea HOM05D004391 ORTHO05D005193 2.0e-22 109.0 94 59.6
Thecc.10G186500 Theobroma cacao HOM05D004391 ORTHO05D005193 2.6e-22 108.6 94 56.4
AT3G10860 Arabidopsis thaliana HOM05D004391 ORTHO05D005193 3.4e-22 108.2 94 56.4
Carub.0003s1010 Capsella rubella HOM05D004391 ORTHO05D005193 3.4e-22 108.2 94 56.4
A05p38380 Brassica napus HOM05D004391 ORTHO05D005193 4.5e-22 107.8 94 56.4
C05p57280 Brassica napus HOM05D004391 ORTHO05D005193 4.5e-22 107.8 94 56.4
BolC5t34384H Brassica oleracea HOM05D004391 ORTHO05D005193 4.5e-22 107.8 94 56.4
BraA05t22629Z Brassica rapa HOM05D004391 ORTHO05D005193 4.5e-22 107.8 94 56.4
CARHR085430 Cardamine hirsuta HOM05D004391 ORTHO05D005193 4.5e-22 107.8 94 55.3
Gorai.012G013200 Gossypium raimondii HOM05D004391 ORTHO05D005193 4.5e-22 107.8 92 58.7
AUR62013781 Chenopodium quinoa HOM05D004391 ORTHO05D005193 7.6e-22 107.1 94 57.4
AL3G22380 Arabidopsis lyrata HOM05D004391 ORTHO05D005193 1.7e-21 105.9 94 55.3
Lalb_Chr04g0251641 Lupinus albus HOM05D004391 ORTHO05D005193 2.9e-21 105.1 94 57.4
Lalb_Chr10g0103971 Lupinus albus HOM05D004391 ORTHO05D005193 2.9e-21 105.1 94 56.4
Ah.05g177740 Amaranthus hybridus HOM05D004391 ORTHO05D005193 3.8e-21 104.8 94 57.4
AUR62023375 Chenopodium quinoa HOM05D004391 ORTHO05D005193 4.9e-21 104.4 94 56.4
THA.LOC104823179 Tarenaya hassleriana HOM05D004391 ORTHO05D005193 4.9e-21 104.4 56 83.9
Gorai.013G009600 Gossypium raimondii HOM05D004391 ORTHO05D005193 8.4e-21 103.6 57 80.7
Sed0004860 Sechium edule HOM05D004391 ORTHO05D005193 8.4e-21 103.6 94 56.4
TPR.G7542 Trifolium pratense HOM05D004391 ORTHO05D005193 8.4e-21 103.6 94 55.3
FvH4_4g07960 Fragaria vesca HOM05D004391 ORTHO05D005193 1.1e-20 103.2 94 54.3
LjContig00141g0006354 Lotus japonicus HOM05D004391 ORTHO05D005193 1.1e-20 103.2 94 53.2
Zm00001eb281780 Zea mays HOM05D004391 ORTHO05D005193 1.9e-20 102.4 56 83.9
CsaV3_2G024700 Cucumis sativus L. HOM05D004391 ORTHO05D005193 2.5e-20 102.1 58 77.6
SGA_v2.0_scaffold122G33334 Striga asiatica HOM05D004391 ORTHO05D005193 5.5e-20 100.9 69 73.9
Medtr5g075690 Medicago truncatula HOM05D004391 ORTHO05D005193 7.1e-20 100.5 92 54.3
Aqoxy2G00689 Aquilegia oxysepala HOM05D004391 ORTHO05D005193 1.2e-19 99.8 94 57.4
Lsat_1_v5_gn_5_177220 Lactuca sativa HOM05D004391 ORTHO05D005193 4.6e-19 97.8 94 48.9
HanXRQChr05g0158631 Helianthus annuus HOM05D004391 ORTHO05D005193 6.0e-19 97.4 94 52.1
SHI19278 Sapria himalayana HOM05D004391 ORTHO05D005193 7.9e-19 97.1 61 73.8
VMungo0647G0523 Vigna mungo HOM05D004391 ORTHO05D005193 7.9e-19 97.1 57 77.2
ECA236G4577 Erigeron canadensis HOM05D004391 ORTHO05D005193 2.3e-18 95.5 94 51.1
ECA248G3374 Erigeron canadensis HOM05D004391 ORTHO05D005193 3.9e-18 94.7 94 48.9
HanXRQChr10g0292911 Helianthus annuus HOM05D004391 ORTHO05D005193 8.7e-18 93.6 94 50.0
Lsat_1_v5_gn_9_13380 Lactuca sativa HOM05D000838 ORTHO05D000656 8.7e-18 93.6 57 71.9
Lsat_1_v5_gn_8_98921 Lactuca sativa HOM05D004391 ORTHO05D005193 5.7e-17 90.9 57 71.9
SGA_v2.0_scaffold129G34161 Striga asiatica HOM05D004391 ORTHO05D005193 7.4e-17 90.5 53 83.0
Lsat_1_v5_gn_8_98901 Lactuca sativa HOM05D004391 ORTHO05D005193 3.7e-16 88.2 52 75.0
Pp3c11_2590 Physcomitrium patens HOM05D004391 ORTHO05D005193 1.8e-15 85.9 94 46.8
Pp3c7_21160 Physcomitrium patens HOM05D004391 ORTHO05D005193 5.3e-15 84.3 94 45.7
Lsat_1_v5_gn_9_13340 Lactuca sativa HOM05D004391 ORTHO05D005193 6.9e-15 84.0 57 64.9
Pp3c1_1570 Physcomitrium patens HOM05D004391 ORTHO05D005193 6.9e-15 84.0 94 45.7
CBR_g1035 Chara braunii HOM05D004391 ORTHO05D005193 1.2e-14 83.2 94 43.6
AagrBONN_evm.TU.Sc2ySwM_362.2485 Anthoceros agrestis HOM05D004391 ORTHO05D005193 1.5e-14 82.8 94 46.8
BolC2t06197H Brassica oleracea HOM05D004391 ORTHO05D005193 2.2e-13 79.0 90 46.7
SEGI_31881 Sequoiadendron giganteum HOM05D004391 ORTHO05D005193 1.4e-12 76.3 53 60.4
BcaB04g21171 Brassica carinata HOM05D004391 ORTHO05D005193 2.5e-12 75.5 74 50.0
C02p02320 Brassica napus HOM05D004391 ORTHO05D005193 5.5e-12 74.3 87 46.0
EL10Ac1g00726 Beta vulgaris HOM05D004391 ORTHO05D005193 4.6e-11 71.2 52 65.4
Oeu007160.1 Olea europaea HOM05D004391 ORTHO05D005193 6.1e-11 70.9 55 67.3
BcaB05g21720 Brassica carinata HOM05D004391 ORTHO05D005193 1.8e-10 69.3 52 61.5
DCAR_023068 Daucus carota HOM05D004391 ORTHO05D005193 3.3e-09 65.1 95 42.1
DCAR_018583 Daucus carota HOM05D004391 ORTHO05D005193 5.7e-09 64.3 55 49.1
Pp3c13_7360 Physcomitrium patens HOM05D004391 ORTHO05D005193 1.3e-08 63.2 94 36.2
Mapoly0022s0089 Marchantia polymorpha HOM05D004391 ORTHO05D005193 1.7e-08 62.8 88 38.6
SMO117G0077 Selaginella moellendorffii HOM05D004391 ORTHO05D005193 3.7e-08 61.6 49 57.1
Mapoly0036s0032 Marchantia polymorpha HOM05D004391 ORTHO05D005193 4.5e-06 54.7 58 43.1


User provided reference genes

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