Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p058712 Quercus lobata HOM05D008070 ORTHO05D001888 3.1e-66 255.0 127 100.0
QL03p058723 Quercus lobata HOM05D010056 ORTHO05D001888 7.9e-22 107.5 105 56.2
CiPaw.05G184900 Carya illinoinensis HOM05D008070 ORTHO05D001888 3.4e-17 92.0 96 47.9
QL04p082607 Quercus lobata HOM05D010056 ORTHO05D001888 8.5e-16 87.4 95 52.6
Haze_12224 Corylus avellana HOM05D008070 ORTHO05D001888 2.7e-14 82.4 96 47.9
Cfa009190 Carpinus fangiana HOM05D008070 ORTHO05D001888 1.0e-13 80.5 96 45.8
MELO3C010682.2 Cucumis melo HOM05D008070 ORTHO05D001888 1.7e-11 73.2 96 41.7
Sed0022593 Sechium edule HOM05D008070 ORTHO05D001888 4.8e-11 71.6 97 39.2
CsaV3_2G024840 Cucumis sativus L. HOM05D008070 ORTHO05D001888 8.2e-11 70.9 96 40.6
TWI75G1444 Tripterygium wilfordii HOM05D008070 ORTHO05D001888 9.1e-10 67.4 115 32.2
ClCG08G017790 Citrullus lanatus HOM05D008070 ORTHO05D001888 2.6e-09 65.9 96 37.5
Duzib251G0841 Durio zibethinus HOM05D008070 ORTHO05D001888 1.7e-08 63.2 95 36.8
Manes.13G026900 Manihot esculenta HOM05D008070 ORTHO05D001888 2.2e-08 62.8 97 32.0
QL04p082907 Quercus lobata HOM05D010056 ORTHO05D001888 2.9e-08 62.4 95 36.8
CsaV3_5G031330 Cucumis sativus L. HOM05D008070 ORTHO05D001888 3.8e-08 62.0 103 34.0
QL04p087995 Quercus lobata HOM05D010056 ORTHO05D001888 5.0e-08 61.6 105 40.0
QL04p088745 Quercus lobata HOM05D010056 ORTHO05D001888 5.0e-08 61.6 94 42.6
MELO3C011973.2 Cucumis melo HOM05D008070 ORTHO05D001888 1.1e-07 60.5 107 30.8
Thhalv10008932m.g Eutrema salsugineum HOM05D009121 ORTHO05D001888 3.2e-07 58.9 116 30.2
CARHR010990 Cardamine hirsuta HOM05D009121 ORTHO05D001888 4.2e-07 58.5 116 30.2
Carub.0001s2294 Capsella rubella HOM05D008070 ORTHO05D001888 5.5e-07 58.2 94 35.1
CiPaw.06G069400 Carya illinoinensis HOM05D008070 ORTHO05D001888 5.5e-07 58.2 96 35.4
QL04p083387 Quercus lobata HOM05D010056 ORTHO05D001888 7.2e-07 57.8 104 35.6
Sed0024894 Sechium edule HOM05D008070 ORTHO05D001888 7.2e-07 57.8 86 40.7
CANSAT01G1404 Cannabis sativa HOM05D008070 ORTHO05D001888 9.4e-07 57.4 92 33.7
Carub.0002s1726 Capsella rubella HOM05D008070 ORTHO05D001888 9.4e-07 57.4 99 30.3
CARHR081260 Cardamine hirsuta HOM05D005742 ORTHO05D001888 9.4e-07 57.4 107 32.7
Cpa.g.sc69.89 Carica papaya HOM05D008070 ORTHO05D001888 9.4e-07 57.4 110 32.7
THA.LOC104822159 Tarenaya hassleriana HOM05D008070 ORTHO05D001888 9.4e-07 57.4 89 37.1
THA.LOC104822979 Tarenaya hassleriana HOM05D008070 ORTHO05D001888 9.4e-07 57.4 87 37.9
TWI36G0098 Tripterygium wilfordii HOM05D008070 ORTHO05D001888 9.4e-07 57.4 79 38.0
AL1G21700 Arabidopsis lyrata HOM05D009121 ORTHO05D001888 1.2e-06 57.0 116 29.3
AL2G29930 Arabidopsis lyrata HOM05D008070 ORTHO05D001888 1.2e-06 57.0 99 29.3
AT1G10770 Arabidopsis thaliana HOM05D009121 ORTHO05D001888 2.1e-06 56.2 116 30.2
Carub.0001s1032 Capsella rubella HOM05D009121 ORTHO05D001888 2.1e-06 56.2 116 28.4
CDE07G0112 Ceratophyllum demersum HOM05D005742 ORTHO05D001888 2.1e-06 56.2 99 33.3
THA.LOC104809586 Tarenaya hassleriana HOM05D009121 ORTHO05D001888 2.1e-06 56.2 120 31.7
MELO3C011974.2 Cucumis melo HOM05D008070 ORTHO05D001888 2.7e-06 55.8 104 31.7
Aa31LG5G17240 Aethionema arabicum HOM05D005742 ORTHO05D001888 3.6e-06 55.5 107 28.0
Sed0000802 Sechium edule HOM05D008070 ORTHO05D001888 4.7e-06 55.1 104 31.7
AT1G70540 Arabidopsis thaliana HOM05D008070 ORTHO05D001888 6.1e-06 54.7 99 28.3
COL.COLO4_24233 Corchorus olitorius HOM05D008070 ORTHO05D001888 6.1e-06 54.7 83 32.5
BcaB03g14151 Brassica carinata HOM05D008070 ORTHO05D001888 7.9e-06 54.3 72 38.9
BcaC05g30549 Brassica carinata HOM05D005742 ORTHO05D001888 7.9e-06 54.3 107 29.0
CDE06G2294 Ceratophyllum demersum HOM05D005742 ORTHO05D001888 7.9e-06 54.3 99 32.3
THA.LOC104819351 Tarenaya hassleriana HOM05D009121 ORTHO05D001888 7.9e-06 54.3 120 26.7


User provided reference genes

Program Settings