Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p057604 Quercus lobata HOM05D009786 ORTHO05D012348 1.1e-77 293.1 139 100.0
CiPaw.05G180500 Carya illinoinensis HOM05D009786 ORTHO05D012348 2.8e-57 225.3 137 77.4
CiPaw.05G180400 Carya illinoinensis HOM05D009786 ORTHO05D012348 1.4e-56 223.0 137 76.6
Haze_12260 Corylus avellana HOM05D009786 ORTHO05D012348 5.4e-56 221.1 139 72.7
CiPaw.05G180600 Carya illinoinensis HOM05D009786 ORTHO05D012348 9.1e-56 220.3 137 75.2
CiPaw.05G180300 Carya illinoinensis HOM05D009786 ORTHO05D012348 5.9e-55 217.6 134 76.9
CiPaw.06G066700 Carya illinoinensis HOM05D009786 ORTHO05D012348 7.7e-55 217.2 137 71.5
CiPaw.06G066800 Carya illinoinensis HOM05D009786 ORTHO05D012348 7.7e-55 217.2 137 71.5
Cfa009224 Carpinus fangiana HOM05D009786 ORTHO05D012348 6.6e-54 214.2 137 73.0
QL03p057632 Quercus lobata HOM05D009786 ORTHO05D012348 5.6e-53 211.1 136 68.4
Prupe.1G043900 Prunus persica HOM05D000256 ORTHO05D000119 1.1e-13 80.5 139 35.3
Prupe.1G059600 Prunus persica HOM05D009786 ORTHO05D012348 1.5e-13 80.1 140 32.9
Prupe.1G060100 Prunus persica HOM05D009786 ORTHO05D012348 3.3e-13 79.0 134 35.1
Prupe.1G059500 Prunus persica HOM05D009786 ORTHO05D012348 8.1e-12 74.3 137 33.6
Prupe.1G219700 Prunus persica HOM05D009786 ORTHO05D012348 1.4e-11 73.6 144 32.6
Cpa.g.sc8.196 Carica papaya HOM05D009786 ORTHO05D012348 9.0e-11 70.9 115 34.8
Prupe.1G060000 Prunus persica HOM05D009786 ORTHO05D012348 2.6e-10 69.3 132 31.1
QL04p080627 Quercus lobata HOM05D009786 ORTHO05D000119 3.4e-10 68.9 110 32.7
Thecc.01G232200 Theobroma cacao HOM05D000256 ORTHO05D000119 5.8e-10 68.2 130 32.3
Prupe.8G208500 Prunus persica HOM05D000256 ORTHO05D000119 7.6e-10 67.8 136 30.9
TWI14G0459 Tripterygium wilfordii HOM05D000256 ORTHO05D000119 7.6e-10 67.8 127 29.1
FAN06G4947 Fragaria x ananassa HOM05D000256 ORTHO05D000119 1.3e-09 67.0 125 34.4
FAN14G0909 Fragaria x ananassa HOM05D000256 ORTHO05D000119 4.9e-09 65.1 140 30.7
Prupe.1G219600 Prunus persica HOM05D009786 ORTHO05D012348 6.4e-09 64.7 111 33.3
TWI14G0081 Tripterygium wilfordii HOM05D000256 ORTHO05D000119 6.4e-09 64.7 143 28.0
Prupe.4G236000 Prunus persica HOM05D000256 ORTHO05D000119 1.1e-08 63.9 109 32.1
PGR044G1572 Punica granatum HOM05D000256 ORTHO05D000119 1.9e-08 63.2 116 33.6
RcHm_v2.0_Chr3g0448331 Rosa chinensis HOM05D000256 ORTHO05D000119 2.4e-08 62.8 127 33.1
Prupe.8G208600 Prunus persica HOM05D000256 ORTHO05D000119 4.2e-08 62.0 141 31.2
RcHm_v2.0_Chr3g0448291 Rosa chinensis HOM05D000256 ORTHO05D000119 5.4e-08 61.6 132 31.1
FAN10G1492 Fragaria x ananassa HOM05D000256 ORTHO05D000119 2.1e-07 59.7 124 32.3
Gorai.004G058000 Gossypium raimondii HOM05D000256 ORTHO05D000119 2.1e-07 59.7 134 32.8
Manes.03G171700 Manihot esculenta HOM05D000256 ORTHO05D000119 2.1e-07 59.7 138 31.9
Gohir.A08G046400 Gossypium hirsutum HOM05D000256 ORTHO05D000119 3.5e-07 58.9 134 32.1
FAN17G1832 Fragaria x ananassa HOM05D009786 ORTHO05D012348 7.9e-07 57.8 118 32.2
Sc05g0002250 Simmondsia chinensis HOM05D000256 ORTHO05D000119 1.0e-06 57.4 105 32.4
EL10Ac2g04507 Beta vulgaris HOM05D000256 ORTHO05D000119 1.7e-06 56.6 130 33.1
Thhalv10015914m.g Eutrema salsugineum HOM05D003012 ORTHO05D000119 1.7e-06 56.6 141 29.1
TWI14G1030 Tripterygium wilfordii HOM05D000256 ORTHO05D000119 2.3e-06 56.2 152 26.3
Nn1g03103 Nelumbo nucifera HOM05D000256 ORTHO05D000119 3.0e-06 55.8 130 31.5
Ciclev10007012m.g Citrus clementina HOM05D010815 ORTHO05D011855 5.1e-06 55.1 130 30.8
Duzib187G0570 Durio zibethinus HOM05D000256 ORTHO05D000119 8.7e-06 54.3 131 26.7


User provided reference genes

Program Settings