Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p057598 Quercus lobata HOM05D006816 ORTHO05D008666 0.0e+00 1233.8 646 100.0
Haze_12261 Corylus avellana HOM05D006816 ORTHO05D008666 1.6e-240 836.3 722 67.0
TAR622G0126 Trochodendron aralioides HOM05D006816 ORTHO05D008666 2.4e-215 752.7 607 69.5
Ciclev10030964m.g Citrus clementina HOM05D006816 ORTHO05D008666 3.2e-212 742.3 590 69.8
Dinv15216 Davidia involucrata HOM05D006816 ORTHO05D008666 1.1e-209 733.8 667 64.5
Gohir.A03G133700 Gossypium hirsutum HOM05D006816 ORTHO05D008666 2.6e-206 722.6 568 69.7
GSVIVG01000542001 Vitis vinifera HOM05D006816 ORTHO05D008666 3.4e-206 722.2 653 64.2
Cpa.g.sc33.36 Carica papaya HOM05D006816 ORTHO05D008666 2.5e-204 716.1 560 69.8
MD13G1099700 Malus domestica HOM05D006816 ORTHO05D008666 5.5e-204 714.9 627 66.3
TWI36G0164 Tripterygium wilfordii HOM05D006816 ORTHO05D008666 9.4e-204 714.1 622 64.8
Lalb_Chr07g0185401 Lupinus albus HOM05D006816 ORTHO05D008666 3.6e-203 712.2 591 65.8
Gohir.D02G158100 Gossypium hirsutum HOM05D006816 ORTHO05D008666 3.9e-202 708.8 588 66.7
Gorai.005G177300 Gossypium raimondii HOM05D006816 ORTHO05D008666 3.9e-202 708.8 588 66.7
FAN22G0176 Fragaria x ananassa HOM05D006816 ORTHO05D008666 5.1e-202 708.4 623 66.5
FAN17G1412 Fragaria x ananassa HOM05D006816 ORTHO05D008666 6.7e-202 708.0 561 70.9
Eucgr.H02486 Eucalyptus grandis HOM05D006816 ORTHO05D008666 4.1e-199 698.7 610 64.4
Lj3C1059T10 Lonicera japonica HOM05D006816 ORTHO05D008666 1.7e-197 693.3 601 64.7
COL.COLO4_23463 Corchorus olitorius HOM05D006816 ORTHO05D008666 2.1e-195 686.4 665 60.6
Glyma.05G174600 Glycine max HOM05D006816 ORTHO05D008666 4.7e-195 685.3 607 63.8
Manes.13G022900 Manihot esculenta HOM05D006816 ORTHO05D008666 1.8e-194 683.3 663 60.5
Phvul.002G259600 Phaseolus vulgaris HOM05D006816 ORTHO05D008666 2.3e-194 682.9 563 66.4
CsaV3_5G031010 Cucumis sativus L. HOM05D006816 ORTHO05D008666 7.4e-193 677.9 630 62.5
VMungo0251G0196 Vigna mungo HOM05D006816 ORTHO05D008666 7.4e-193 677.9 605 64.3
Medtr8g089810 Medicago truncatula HOM05D006816 ORTHO05D008666 3.7e-192 675.6 555 65.6
Atru.chr11.2152 Acer truncatum HOM05D006816 ORTHO05D008666 1.2e-190 670.6 636 61.9
CARHR060480 Cardamine hirsuta HOM05D006816 ORTHO05D008666 3.5e-190 669.1 574 64.3
Lj4g0008868 Lotus japonicus HOM05D006816 ORTHO05D008666 4.5e-190 668.7 602 62.0
Oeu057544.1 Olea europaea HOM05D006816 ORTHO05D008666 4.5e-190 668.7 648 60.2
Ca_17778_v3 Cicer arietinum L. HOM05D006816 ORTHO05D008666 5.9e-190 668.3 556 65.3
Thhalv10018280m.g Eutrema salsugineum HOM05D006816 ORTHO05D008666 7.7e-190 667.9 604 62.4
THA.LOC104825556 Tarenaya hassleriana HOM05D006816 ORTHO05D008666 2.2e-189 666.4 546 66.7
MELO3C011940.2 Cucumis melo HOM05D006816 ORTHO05D008666 3.8e-189 665.6 646 61.1
Sed0004203 Sechium edule HOM05D006816 ORTHO05D008666 5.0e-189 665.2 621 61.7
FvH4_4g25720 Fragaria vesca HOM05D006816 ORTHO05D008666 1.5e-188 663.7 600 63.5
Solyc05g013670.3 Solanum lycopersicum HOM05D006816 ORTHO05D008666 4.2e-188 662.1 605 62.5
Sopen05g008580 Solanum pennellii HOM05D006816 ORTHO05D008666 5.5e-188 661.8 648 59.7
BcaC08g46032 Brassica carinata HOM05D006816 ORTHO05D008666 7.2e-188 661.4 573 63.9
BcaB03g15378 Brassica carinata HOM05D006816 ORTHO05D008666 1.2e-187 660.6 573 64.4
Sabra10G0021100 Salix brachista HOM05D006816 ORTHO05D008666 1.2e-187 660.6 605 62.3
TPR.G6183 Trifolium pratense HOM05D006816 ORTHO05D008666 1.6e-187 660.2 555 64.3
Carub.0002s1430 Capsella rubella HOM05D006816 ORTHO05D008666 2.1e-187 659.8 572 63.3
Hund06034 Selenicereus undatus HOM05D006816 ORTHO05D008666 3.6e-187 659.1 556 65.5
C06p38240 Brassica napus HOM05D006816 ORTHO05D008666 6.1e-187 658.3 573 63.4
BolC6t38923H Brassica oleracea HOM05D006816 ORTHO05D008666 6.1e-187 658.3 573 63.7
PGSC0003DMG400018598 Solanum tuberosum HOM05D006816 ORTHO05D008666 6.1e-187 658.3 653 58.5
HanXRQChr17g0569531 Helianthus annuus HOM05D006816 ORTHO05D008666 1.5e-185 653.7 551 64.1
Sp5g22850 Schrenkiella parvula HOM05D006816 ORTHO05D008666 3.4e-185 652.5 574 63.1
AL2G26590 Arabidopsis lyrata HOM05D006816 ORTHO05D008666 4.4e-185 652.1 570 63.3
AT1G67840 Arabidopsis thaliana HOM05D006816 ORTHO05D008666 4.4e-185 652.1 569 63.4
Nitab4.5_0006963g0030 Nicotiana tabacum HOM05D006816 ORTHO05D008666 5.7e-185 651.7 668 60.5
CANSAT01G2021 Cannabis sativa HOM05D006816 ORTHO05D008666 7.5e-185 651.4 602 62.6
BraA07t30858Z Brassica rapa HOM05D006816 ORTHO05D008666 1.7e-184 650.2 573 63.0
A07p32350 Brassica napus HOM05D006816 ORTHO05D008666 3.7e-184 649.0 573 62.8
FAN12G1622 Fragaria x ananassa HOM05D006816 ORTHO05D008666 8.3e-184 647.9 561 66.1
PSO063G6228 Papaver somniferum HOM05D006816 ORTHO05D008666 8.3e-184 647.9 629 59.5
PSO754G0080 Papaver somniferum HOM05D006816 ORTHO05D008666 9.1e-183 644.4 619 60.3
Nn4g22582 Nelumbo nucifera HOM05D006816 ORTHO05D008666 2.7e-182 642.9 655 58.6
Ah.02g130220 Amaranthus hybridus HOM05D006816 ORTHO05D008666 4.5e-182 642.1 635 58.9
RcHm_v2.0_Chr4g0433151 Rosa chinensis HOM05D006816 ORTHO05D008666 1.0e-181 641.0 598 62.7
ClCG05G025840 Citrullus lanatus HOM05D006816 ORTHO05D008666 8.5e-181 637.9 643 59.6
Migut.K00611 Erythranthe guttata HOM05D006816 ORTHO05D008666 1.1e-180 637.5 653 58.0
Psat7g059360 Pisum sativum HOM05D006816 ORTHO05D008666 3.2e-180 636.0 548 63.0
Lsat_1_v5_gn_4_4020 Lactuca sativa HOM05D006816 ORTHO05D008666 4.2e-180 635.6 615 58.2
EL10Ac6g13857 Beta vulgaris HOM05D006816 ORTHO05D008666 5.5e-180 635.2 638 59.7
Aa31sc755G30 Aethionema arabicum HOM05D006816 ORTHO05D008666 9.4e-180 634.4 644 57.3
ECA234G3219 Erigeron canadensis HOM05D006816 ORTHO05D008666 1.2e-179 634.0 544 61.9
Aqoxy5G03738 Aquilegia oxysepala HOM05D006816 ORTHO05D008666 2.1e-179 633.3 588 62.2
AUR62024254 Chenopodium quinoa HOM05D006816 ORTHO05D008666 1.4e-178 630.6 587 61.0
vmacro01121 Vaccinium macrocarpon HOM05D006816 ORTHO05D008666 6.8e-178 628.2 666 59.2
CSS0008455 Camellia sinensis var. sinensis HOM05D006816 ORTHO05D008666 2.6e-177 626.3 559 63.0
SalBow2G0630 Salvia bowleyana HOM05D006816 ORTHO05D008666 9.8e-177 624.4 567 61.0
Cc11_g15850 Coffea canephora HOM05D006816 ORTHO05D008666 4.9e-176 622.1 565 61.8
Peaxi162Scf00128g00318 Petunia axillaris HOM05D006816 ORTHO05D008666 5.9e-174 615.1 566 62.2
PGR119G0117 Punica granatum HOM05D006816 ORTHO05D008666 4.0e-170 602.4 592 59.3
Duzib251G0886 Durio zibethinus HOM05D006816 ORTHO05D008666 1.5e-169 600.5 568 61.8
unitig_699.g19932 Utricularia gibba HOM05D006816 ORTHO05D008666 4.9e-168 595.5 556 59.4
AUR62005487 Chenopodium quinoa HOM05D006816 ORTHO05D008666 4.3e-164 582.4 625 55.4
CAN.G436.5 Capsicum annuum HOM05D006816 ORTHO05D008666 3.5e-158 562.8 487 63.7
ATR0824G245 Amborella trichopoda HOM05D006816 ORTHO05D008666 1.8e-154 550.4 669 50.8
Zm00001eb319330 Zea mays HOM05D006816 ORTHO05D008666 9.8e-153 544.7 578 55.2
Actinidia01356 Actinidia chinensis HOM05D006816 ORTHO05D008666 4.7e-147 525.8 540 58.7
Nitab4.5_0000524g0100 Nicotiana tabacum HOM05D006816 ORTHO05D008666 1.1e-146 524.6 571 56.4
DCAR_031163 Daucus carota HOM05D006816 ORTHO05D008666 8.6e-141 505.0 599 51.6
Sc11g0000930 Simmondsia chinensis HOM05D006816 ORTHO05D008666 9.9e-137 491.5 473 60.0
CiPaw.05G180700 Carya illinoinensis HOM05D006816 ORTHO05D008666 4.3e-132 476.1 432 66.9
Thecc.02G261900 Theobroma cacao HOM05D006816 ORTHO05D008666 7.1e-127 458.8 462 60.4
SGA_v2.0_scaffold100G29566 Striga asiatica HOM05D006816 ORTHO05D008666 1.3e-123 448.0 573 48.2
SEGI_18687 Sequoiadendron giganteum HOM05D006816 ORTHO05D008666 1.3e-120 438.0 554 46.6
arahy.Tifrunner.gnm1.ann1.2HFS1Z Arachis hypogaea HOM05D006816 ORTHO05D008666 2.3e-117 427.2 431 58.2
arahy.Tifrunner.gnm1.ann1.CH9KSW Arachis hypogaea HOM05D006816 ORTHO05D008666 1.3e-115 421.4 431 57.8
FAN07G2231 Fragaria x ananassa HOM05D006816 ORTHO05D008666 2.8e-115 420.2 432 61.3
Potri.010G047500 Populus trichocarpa HOM05D006816 ORTHO05D008666 4.8e-115 419.5 475 55.4
Prupe.1G246300 Prunus persica HOM05D006816 ORTHO05D008666 7.6e-113 412.1 427 58.8
HPP92_023364 Vanilla planifolia HOM05D006816 ORTHO05D008666 4.3e-108 396.4 323 64.7
CDE02G3152 Ceratophyllum demersum HOM05D006816 ORTHO05D008666 1.9e-95 354.4 471 47.8
Os12g0292900 Oryza sativa ssp. japonica HOM05D006816 ORTHO05D008666 3.7e-83 313.5 407 48.2
Mapoly0088s0066 Marchantia polymorpha HOM05D006816 ORTHO05D008666 3.0e-77 293.9 586 37.9
Glyma.08G131850 Glycine max HOM05D006816 ORTHO05D008666 2.6e-60 237.7 175 69.7
MBI17_g43191_MAGBIO Magnolia biondii HOM05D006816 ORTHO05D008666 2.2e-59 234.6 319 47.3
Pp3c11_24610 Physcomitrium patens HOM05D006816 ORTHO05D008666 2.2e-51 208.0 520 32.9
Psat3g153160 Pisum sativum HOM05D006816 ORTHO05D008517 1.9e-39 168.3 136 63.2
Psat3g153200 Pisum sativum HOM05D006816 ORTHO05D008666 7.5e-36 156.4 156 56.4
HPP92_023363 Vanilla planifolia HOM05D006816 ORTHO05D008666 2.1e-33 148.3 142 56.3
CBR_g52389 Chara braunii HOM05D006816 ORTHO05D008666 1.9e-31 141.7 355 32.7
Psat2g121560 Pisum sativum HOM05D006816 ORTHO05D008666 1.6e-30 138.7 141 56.7
Psat4g077560 Pisum sativum HOM05D006816 ORTHO05D008666 2.8e-30 137.9 98 71.4
CDE09G0157 Ceratophyllum demersum HOM05D006816 ORTHO05D008666 4.0e-29 134.0 162 48.1
COL.COLO4_35805 Corchorus olitorius HOM05D006816 ORTHO05D008666 5.8e-28 130.2 100 65.0
Actinidia08129 Actinidia chinensis HOM05D006816 ORTHO05D008666 1.3e-19 102.4 125 50.4
Actinidia01355 Actinidia chinensis HOM05D006816 ORTHO05D008666 3.2e-18 97.8 61 77.0
FvH4_4g35670 Fragaria vesca HOM05D006816 ORTHO05D008666 8.7e-16 89.7 96 56.2
CBR_g52391 Chara braunii HOM05D006816 ORTHO05D008666 6.9e-13 80.1 188 32.4
FAN22G1065 Fragaria x ananassa HOM05D000247 ORTHO05D000288 9.0e-13 79.7 93 53.8
Glyma.08G131775 Glycine max HOM05D006816 ORTHO05D008666 6.2e-06 57.0 92 39.1


User provided reference genes

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