Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p056162 Quercus lobata HOM05D006855 ORTHO05D008695 2.1e-149 532.3 264 100.0
CiPaw.05G176800 Carya illinoinensis HOM05D006855 ORTHO05D008695 9.5e-62 241.1 149 77.9
Haze_12292 Corylus avellana HOM05D006855 ORTHO05D008695 5.2e-60 235.3 168 72.0
TAR629G1507 Trochodendron aralioides HOM05D006855 ORTHO05D008695 1.2e-59 234.2 151 72.8
GSVIVG01000584001 Vitis vinifera HOM05D006855 ORTHO05D008695 2.1e-56 223.4 151 70.9
Potri.010G051200 Populus trichocarpa HOM05D006855 ORTHO05D008695 2.7e-56 223.0 151 68.9
Prupe.1G240700 Prunus persica HOM05D006855 ORTHO05D008695 6.0e-56 221.9 152 68.4
Manes.12G019600 Manihot esculenta HOM05D006855 ORTHO05D008695 6.6e-55 218.4 151 67.5
Aqoxy3G00656 Aquilegia oxysepala HOM05D006855 ORTHO05D008695 1.1e-54 217.6 151 66.9
Aqoxy3G01366 Aquilegia oxysepala HOM05D006855 ORTHO05D008695 1.1e-54 217.6 151 66.9
MD13G1105700 Malus domestica HOM05D006855 ORTHO05D008695 2.5e-54 216.5 151 70.9
Ciclev10031545m.g Citrus clementina HOM05D006855 ORTHO05D008695 3.3e-54 216.1 150 68.7
Nn3g16630 Nelumbo nucifera HOM05D006855 ORTHO05D008695 3.6e-53 212.6 148 67.6
TWI75G0344 Tripterygium wilfordii HOM05D006855 ORTHO05D008695 1.1e-52 211.1 134 73.1
Eucgr.H02451 Eucalyptus grandis HOM05D006855 ORTHO05D008695 1.8e-52 210.3 135 71.1
FAN12G0810 Fragaria x ananassa HOM05D006855 ORTHO05D008695 5.2e-52 208.8 152 67.8
RcHm_v2.0_Chr4g0432431 Rosa chinensis HOM05D006855 ORTHO05D008695 8.9e-52 208.0 152 67.1
FAN17G2133 Fragaria x ananassa HOM05D006855 ORTHO05D008695 4.4e-51 205.7 152 67.1
Glyma.11G244400 Glycine max HOM05D006855 ORTHO05D008695 5.8e-51 205.3 136 69.9
Atru.chr11.2187 Acer truncatum HOM05D006855 ORTHO05D008695 7.6e-51 204.9 151 65.6
FAN22G2334 Fragaria x ananassa HOM05D006855 ORTHO05D008695 4.9e-50 202.2 138 70.3
Lj6g0028045 Lotus japonicus HOM05D006855 ORTHO05D008695 4.9e-50 202.2 137 67.9
CANSAT01G1415 Cannabis sativa HOM05D006855 ORTHO05D008695 1.1e-49 201.1 149 63.8
arahy.Tifrunner.gnm1.ann1.FYV5AX Arachis hypogaea HOM05D006855 ORTHO05D008695 2.4e-49 199.9 136 70.6
Actinidia15119 Actinidia chinensis HOM05D006855 ORTHO05D008695 4.1e-49 199.1 149 62.4
Dinv14753 Davidia involucrata HOM05D006855 ORTHO05D008695 4.1e-49 199.1 149 65.8
Lalb_Chr11g0075551 Lupinus albus HOM05D006855 ORTHO05D008695 5.4e-49 198.7 136 68.4
Phvul.001G256400 Phaseolus vulgaris HOM05D006855 ORTHO05D008695 5.4e-49 198.7 137 67.9
COL.COLO4_23530 Corchorus olitorius HOM05D006855 ORTHO05D008695 1.2e-48 197.6 149 63.8
Medtr3g086360 Medicago truncatula HOM05D006855 ORTHO05D008695 1.6e-48 197.2 135 67.4
Psat5g092640 Pisum sativum HOM05D006855 ORTHO05D008695 1.6e-48 197.2 134 67.2
PGR083G2447 Punica granatum HOM05D006855 ORTHO05D008695 1.6e-48 197.2 149 63.1
vmacro16160 Vaccinium macrocarpon HOM05D006855 ORTHO05D008695 2.1e-48 196.8 135 65.2
CSS0027349 Camellia sinensis var. sinensis HOM05D006855 ORTHO05D008695 3.5e-48 196.1 151 61.6
MELO3C011916.2 Cucumis melo HOM05D006855 ORTHO05D008695 6.0e-48 195.3 150 66.0
TPR.G5676 Trifolium pratense HOM05D006855 ORTHO05D008695 6.0e-48 195.3 137 66.4
FAN07G2733 Fragaria x ananassa HOM05D006855 ORTHO05D008695 7.8e-48 194.9 143 67.8
Duzib248G0606 Durio zibethinus HOM05D006855 ORTHO05D008695 1.0e-47 194.5 149 62.4
Cpa.g.sc33.79 Carica papaya HOM05D006855 ORTHO05D008695 1.3e-47 194.1 134 67.2
CSS0002421 Camellia sinensis var. sinensis HOM05D006855 ORTHO05D008695 3.0e-47 193.0 151 60.9
Gohir.D12G150600 Gossypium hirsutum HOM05D006855 ORTHO05D008695 1.5e-46 190.7 137 62.8
Gorai.008G162100 Gossypium raimondii HOM05D006855 ORTHO05D008695 1.5e-46 190.7 137 63.5
ClCG05G026110 Citrullus lanatus HOM05D006855 ORTHO05D008695 2.5e-46 189.9 151 63.6
Ca_25129_v3 Cicer arietinum L. HOM05D006855 ORTHO05D008695 4.3e-46 189.1 125 69.6
Nitab4.5_0015117g0010 Nicotiana tabacum HOM05D006855 ORTHO05D008695 4.3e-46 189.1 149 59.7
CsaV3_5G030740 Cucumis sativus L. HOM05D006855 ORTHO05D008695 7.3e-46 188.3 150 63.3
Thecc.02G266900 Theobroma cacao HOM05D006855 ORTHO05D008695 7.3e-46 188.3 135 66.7
CAN.G379.20 Capsicum annuum HOM05D006855 ORTHO05D008695 2.8e-45 186.4 135 62.2
AUR62024216 Chenopodium quinoa HOM05D006855 ORTHO05D008695 3.6e-45 186.0 136 64.0
Solyc01g008900.4 Solanum lycopersicum HOM05D006855 ORTHO05D008695 3.6e-45 186.0 144 59.7
Ah.02g130370 Amaranthus hybridus HOM05D006855 ORTHO05D008695 1.4e-44 184.1 138 64.5
AUR62005523 Chenopodium quinoa HOM05D006855 ORTHO05D008695 1.8e-44 183.7 136 62.5
Gohir.A12G146000 Gossypium hirsutum HOM05D006855 ORTHO05D008695 1.8e-44 183.7 127 66.1
Sopen01g004390 Solanum pennellii HOM05D006855 ORTHO05D008695 2.4e-44 183.3 144 58.3
Sed0018660 Sechium edule HOM05D006855 ORTHO05D008695 5.2e-44 182.2 151 61.6
Lsat_1_v5_gn_8_153661 Lactuca sativa HOM05D006855 ORTHO05D008695 6.8e-44 181.8 144 59.7
PSO210G7557 Papaver somniferum HOM05D006855 ORTHO05D008695 6.8e-44 181.8 151 58.3
PGSC0003DMG400022710 Solanum tuberosum HOM05D006855 ORTHO05D008695 6.8e-44 181.8 130 63.1
HanXRQChr12g0371791 Helianthus annuus HOM05D006855 ORTHO05D008695 8.9e-44 181.4 144 60.4
Cc11_g16140 Coffea canephora HOM05D006855 ORTHO05D008695 1.2e-43 181.0 148 60.1
Peaxi162Scf00050g00819 Petunia axillaris HOM05D006855 ORTHO05D008695 1.2e-43 181.0 144 59.0
EL10As2g23185 Beta vulgaris HOM05D006855 ORTHO05D008695 2.0e-43 180.3 137 62.8
ATR0796G133 Amborella trichopoda HOM05D006855 ORTHO05D008695 2.6e-43 179.9 149 60.4
PSO478G2928 Papaver somniferum HOM05D006855 ORTHO05D008695 2.6e-43 179.9 151 58.3
VMungo1383G3215 Vigna mungo HOM05D000933 ORTHO05D000820 3.4e-43 179.5 138 63.8
THA.LOC104825678 Tarenaya hassleriana HOM05D006855 ORTHO05D008695 9.9e-43 177.9 135 60.7
Migut.K00633 Erythranthe guttata HOM05D006855 ORTHO05D008695 1.7e-42 177.2 137 62.8
MSTRG.548 Avicennia marina HOM05D006855 ORTHO05D008695 1.6e-40 170.6 144 57.6
SalBow2G0666 Salvia bowleyana HOM05D006855 ORTHO05D008695 3.5e-40 169.5 147 56.5
CDE02G0600 Ceratophyllum demersum HOM05D006855 ORTHO05D008695 6.0e-40 168.7 146 54.1
FAN15G2953 Fragaria x ananassa HOM05D006855 ORTHO05D008695 3.9e-39 166.0 116 68.1
FAN08G3042 Fragaria x ananassa HOM05D006855 ORTHO05D008695 5.1e-39 165.6 117 67.5
FAN14G3171 Fragaria x ananassa HOM05D006855 ORTHO05D008695 5.1e-39 165.6 117 67.5
HPP92_023148 Vanilla planifolia HOM05D006855 ORTHO05D008695 1.9e-38 163.7 131 55.0
FAN23G2199 Fragaria x ananassa HOM05D006855 ORTHO05D008695 4.3e-38 162.5 113 68.1
FAN18G3688 Fragaria x ananassa HOM05D006855 ORTHO05D008695 9.6e-38 161.4 103 71.8
SGA_v2.0_scaffold100G29585 Striga asiatica HOM05D006855 ORTHO05D008695 3.6e-37 159.5 126 59.5
Aa31LG2G6230 Aethionema arabicum HOM05D006855 ORTHO05D008695 4.8e-37 159.1 136 54.4
CARHR147120 Cardamine hirsuta HOM05D006855 ORTHO05D008695 4.8e-37 159.1 135 57.8
C07p35130 Brassica napus HOM05D006855 ORTHO05D008695 1.1e-36 157.9 134 58.2
Thhalv10004274m.g Eutrema salsugineum HOM05D006855 ORTHO05D008695 1.1e-36 157.9 135 57.0
Sp2g15320 Schrenkiella parvula HOM05D006855 ORTHO05D008695 1.1e-36 157.9 135 57.8
Zm00001eb155910 Zea mays HOM05D006855 ORTHO05D008695 2.4e-36 156.8 148 54.7
ECA233G5842 Erigeron canadensis HOM05D000068 ORTHO05D000084 3.1e-36 156.4 131 61.1
A06p42230 Brassica napus HOM05D006855 ORTHO05D008695 4.0e-36 156.0 135 57.0
BraA06t27139Z Brassica rapa HOM05D006855 ORTHO05D008695 4.0e-36 156.0 135 57.0
BcaC06g31090 Brassica carinata HOM05D006855 ORTHO05D008695 6.9e-36 155.2 135 56.3
BcaC06g33927 Brassica carinata HOM05D006855 ORTHO05D008695 6.9e-36 155.2 134 56.7
BolC7t44041H Brassica oleracea HOM05D006855 ORTHO05D008695 6.9e-36 155.2 134 56.7
Carub.0005s0400 Capsella rubella HOM05D006855 ORTHO05D008695 6.9e-36 155.2 135 55.6
AL5G14830 Arabidopsis lyrata HOM05D006855 ORTHO05D008695 9.0e-36 154.8 138 55.8
Lj3A1062T101 Lonicera japonica HOM05D006855 ORTHO05D008695 1.5e-35 154.1 130 58.5
Os01g0695600 Oryza sativa ssp. japonica HOM05D006855 ORTHO05D008695 2.9e-34 149.8 145 52.4
SEGI_08498 Sequoiadendron giganteum HOM05D006855 ORTHO05D008695 2.9e-34 149.8 130 55.4
QL02p012052 Quercus lobata HOM05D000289 ORTHO05D008695 1.1e-33 147.9 130 69.2
QL11p033749 Quercus lobata HOM05D000289 ORTHO05D000208 1.1e-33 147.9 130 69.2
Carub.0005s0511 Capsella rubella HOM05D006855 ORTHO05D008695 2.1e-32 143.7 220 40.9
Pp3c22_21870 Physcomitrium patens HOM05D006855 ORTHO05D008695 2.1e-32 143.7 130 53.1
Mapoly0058s0079 Marchantia polymorpha HOM05D006855 ORTHO05D008695 1.1e-30 137.9 133 54.1
unitig_699.g19941 Utricularia gibba HOM05D002671 ORTHO05D001380 7.9e-24 115.2 117 49.6
Nitab4.5_0000718g0180 Nicotiana tabacum HOM05D006855 ORTHO05D008695 1.5e-22 110.9 76 68.4
SMO203G0085 Selaginella moellendorffii HOM05D006855 ORTHO05D008695 3.3e-22 109.8 122 47.5
QL04p093201 Quercus lobata HOM05D000289 ORTHO05D337385 6.9e-20 102.1 76 77.6
QL02p027674 Quercus lobata HOM05D000289 ORTHO05D337668 9.0e-20 101.7 94 66.0
CSS0040008 Camellia sinensis var. sinensis HOM05D006855 ORTHO05D008695 1.0e-18 98.2 74 55.4
QL01p051174 Quercus lobata HOM05D002827 ORTHO05D003148 6.5e-18 95.5 66 78.8
QL04p093439 Quercus lobata HOM05D004270 ORTHO05D005037 1.9e-17 94.0 52 92.3
MBI19_g16323_MAGBIO Magnolia biondii HOM05D006855 ORTHO05D008695 9.3e-17 91.7 74 59.5
QL07p031531 Quercus lobata HOM05D000115 ORTHO05D000464 4.6e-16 89.4 94 58.5
Cre01.g031850 Chlamydomonas reinhardtii HOM05D006855 ORTHO05D008695 6.0e-16 89.0 177 32.8
QL04p011304 Quercus lobata HOM05D000009 ORTHO05D000008 2.5e-14 83.6 133 52.6
arahy.Tifrunner.gnm1.ann1.74BAAJ Arachis hypogaea HOM05D006855 ORTHO05D008695 3.7e-13 79.7 59 61.0
QL06p000862 Quercus lobata HOM05D000003 ORTHO05D000004 8.2e-13 78.6 126 49.2
CSS0015338 Camellia sinensis var. sinensis HOM05D006855 ORTHO05D008695 5.3e-12 75.9 73 46.6
QL06p008168 Quercus lobata HOM05D000161 ORTHO05D000111 3.4e-11 73.2 54 75.9
VMungo1383G3417 Vigna mungo HOM05D006350 ORTHO05D007850 3.4e-11 73.2 60 53.3
SMO327G0033 Selaginella moellendorffii HOM05D006855 ORTHO05D008695 1.0e-10 71.6 85 40.0
SMO203G0059 Selaginella moellendorffii HOM05D006855 ORTHO05D008695 4.2e-09 66.2 87 40.2
QL06p037830 Quercus lobata HOM05D003228 ORTHO05D003698 1.2e-08 64.7 66 60.6
AT3G26115 Arabidopsis thaliana HOM05D006855 ORTHO05D008695 4.6e-08 62.8 60 43.3
QL09p053117 Quercus lobata HOM05D000003 ORTHO05D000004 3.9e-07 59.7 125 42.4
QL02p014854 Quercus lobata HOM05D000432 ORTHO05D000320 4.3e-06 56.2 33 84.8
AUR62024613 Chenopodium quinoa HOM05D025040 ORTHO05D138236 9.7e-06 55.1 44 50.0


User provided reference genes

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