Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p055861 Quercus lobata HOM05D002970 ORTHO05D009571 9.7e-150 533.5 277 100.0
CiPaw.05G175600 Carya illinoinensis HOM05D002970 ORTHO05D009571 8.9e-111 404.1 275 74.2
Haze_12309 Corylus avellana HOM05D007119 ORTHO05D009220 6.8e-103 377.9 299 68.6
GSVIVG01010294001 Vitis vinifera HOM05D002970 ORTHO05D009571 1.3e-101 373.6 290 68.6
CANSAT01G2975 Cannabis sativa HOM05D002970 ORTHO05D009571 1.4e-100 370.2 274 69.0
Thecc.02G269300 Theobroma cacao HOM05D002970 ORTHO05D009571 1.6e-99 366.7 288 67.0
Prupe.1G238700 Prunus persica HOM05D002970 ORTHO05D009571 3.5e-99 365.5 278 68.7
Duzib248G1026 Durio zibethinus HOM05D002970 ORTHO05D009571 6.0e-99 364.8 292 66.8
COL.COLO4_23553 Corchorus olitorius HOM05D002970 ORTHO05D007037 1.0e-98 364.0 288 66.0
MD16G1107600 Malus domestica HOM05D002970 ORTHO05D009571 2.5e-97 359.4 278 68.3
CSS0013806 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 7.3e-97 357.8 263 71.5
Ciclev10032228m.g Citrus clementina HOM05D002970 ORTHO05D009571 1.6e-96 356.7 280 67.1
Potri.008G181400 Populus trichocarpa HOM05D002970 ORTHO05D009571 6.4e-93 344.7 288 64.6
Atru.chr11.2205 Acer truncatum HOM05D002970 ORTHO05D009571 2.4e-92 342.8 278 65.5
FvH4_4g24960 Fragaria vesca HOM05D002970 ORTHO05D009571 4.2e-92 342.0 275 64.7
RcHm_v2.0_Chr4g0432001 Rosa chinensis HOM05D002970 ORTHO05D009571 4.2e-92 342.0 275 64.4
Lalb_Chr07g0185611 Lupinus albus HOM05D002970 ORTHO05D009571 1.2e-91 340.5 260 69.2
FAN12G3280 Fragaria x ananassa HOM05D002970 ORTHO05D009571 1.6e-91 340.1 275 64.7
Manes.12G018300 Manihot esculenta HOM05D002970 ORTHO05D009571 2.7e-91 339.3 262 69.5
TPR.G6253 Trifolium pratense HOM05D002970 ORTHO05D009571 2.3e-90 336.3 264 65.9
Ca_17805_v3 Cicer arietinum L. HOM05D002970 ORTHO05D009571 3.9e-90 335.5 244 71.7
FAN17G2692 Fragaria x ananassa HOM05D002970 ORTHO05D009571 8.7e-90 334.3 277 63.9
Cc11_g16280 Coffea canephora HOM05D002970 ORTHO05D009571 1.5e-89 333.6 290 58.6
Medtr8g089550 Medicago truncatula HOM05D002970 ORTHO05D009571 2.5e-89 332.8 266 65.0
Gorai.009G334200 Gossypium raimondii HOM05D002970 ORTHO05D009571 4.3e-89 332.0 288 62.2
Phvul.002G257900 Phaseolus vulgaris HOM05D002970 ORTHO05D009571 4.3e-89 332.0 257 68.1
CsaV3_2G025140 Cucumis sativus L. HOM05D002970 ORTHO05D009571 3.6e-88 328.9 278 64.0
Atru.BG.282.p Acer truncatum HOM05D002970 ORTHO05D009571 2.4e-87 326.2 193 81.3
MELO3C010711.2 Cucumis melo HOM05D002970 ORTHO05D009571 4.0e-87 325.5 278 63.7
Nitab4.5_0000041g0260 Nicotiana tabacum HOM05D002970 ORTHO05D009571 1.2e-86 323.9 283 59.0
Lj6C818G9 Lonicera japonica HOM05D002970 ORTHO05D009571 1.7e-85 320.1 277 62.8
CAN.G49.8 Capsicum annuum HOM05D002970 ORTHO05D009571 6.4e-85 318.2 280 58.6
Nitab4.5_0002688g0010 Nicotiana tabacum HOM05D002970 ORTHO05D009571 6.4e-85 318.2 283 58.3
Gohir.A05G311600 Gossypium hirsutum HOM05D002970 ORTHO05D009571 8.4e-85 317.8 227 70.5
Sp2g15280 Schrenkiella parvula HOM05D002970 ORTHO05D009571 1.1e-84 317.4 277 58.1
MBI11_g24187_MAGBIO Magnolia biondii HOM05D002970 ORTHO05D009571 2.4e-84 316.2 274 61.7
Sopen05g009220 Solanum pennellii HOM05D002970 ORTHO05D009571 2.4e-84 316.2 262 61.8
Peaxi162Scf00128g00724 Petunia axillaris HOM05D002970 ORTHO05D009571 9.3e-84 314.3 261 61.7
PGR102G3027 Punica granatum HOM05D002970 ORTHO05D009571 1.2e-83 313.9 278 60.8
Thhalv10004665m.g Eutrema salsugineum HOM05D002970 ORTHO05D009571 2.7e-83 312.8 270 59.3
PGSC0003DMG400010736 Solanum tuberosum HOM05D002970 ORTHO05D009571 3.5e-83 312.4 257 62.3
Psat7g060120 Pisum sativum HOM05D002970 ORTHO05D009571 6.0e-83 311.6 251 64.9
Sabra08G0138400 Salix brachista HOM05D000799 ORTHO05D000629 7.9e-83 311.2 282 61.0
Aqoxy5G03608 Aquilegia oxysepala HOM05D002970 ORTHO05D009571 2.3e-82 309.7 294 56.5
ECA234G3025 Erigeron canadensis HOM05D002970 ORTHO05D009571 2.3e-82 309.7 269 59.9
AL5G14780 Arabidopsis lyrata HOM05D002970 ORTHO05D009571 1.1e-81 307.4 274 59.1
CARHR147070 Cardamine hirsuta HOM05D002970 ORTHO05D009571 1.5e-81 307.0 280 57.5
BcaC06g31093 Brassica carinata HOM05D002970 ORTHO05D009571 2.5e-81 306.2 252 61.5
AT3G26085 Arabidopsis thaliana HOM05D002970 ORTHO05D009571 3.3e-81 305.8 254 61.0
arahy.Tifrunner.gnm1.ann1.4Z4H5J Arachis hypogaea HOM05D002970 ORTHO05D009571 2.1e-80 303.1 201 76.1
arahy.Tifrunner.gnm1.ann1.C1FJC6 Arachis hypogaea HOM05D002970 ORTHO05D009571 2.8e-80 302.8 201 75.6
Eucgr.B03232 Eucalyptus grandis HOM05D002970 ORTHO05D009571 2.8e-80 302.8 285 56.5
BolC7t44037H Brassica oleracea HOM05D007119 ORTHO05D009220 3.6e-80 302.4 274 58.0
BcaC06g31096 Brassica carinata HOM05D007119 ORTHO05D009220 4.8e-80 302.0 276 57.2
BcaC06g33929 Brassica carinata HOM05D002970 ORTHO05D009571 4.8e-80 302.0 276 57.2
C07p35060 Brassica napus HOM05D007119 ORTHO05D009220 4.8e-80 302.0 274 58.0
Carub.0005s0396 Capsella rubella HOM05D002970 ORTHO05D009571 4.8e-80 302.0 273 57.9
HanXRQChr17g0569221 Helianthus annuus HOM05D002970 ORTHO05D009571 4.8e-80 302.0 259 59.8
A06p42260 Brassica napus HOM05D007119 ORTHO05D009220 6.2e-80 301.6 271 57.6
EL10Ac6g15186 Beta vulgaris HOM05D002970 ORTHO05D009571 8.1e-80 301.2 277 59.6
BraA06t27142Z Brassica rapa HOM05D007119 ORTHO05D009220 1.8e-79 300.1 272 58.1
Lsat_1_v5_gn_4_2440 Lactuca sativa HOM05D000799 ORTHO05D009571 9.0e-79 297.7 260 60.0
THA.LOC104825684 Tarenaya hassleriana HOM05D002970 ORTHO05D009571 3.8e-77 292.4 265 57.7
vmacro16152 Vaccinium macrocarpon HOM05D002970 ORTHO05D009571 8.4e-77 291.2 303 55.8
Hund25423 Selenicereus undatus HOM05D002970 ORTHO05D009571 2.4e-76 289.7 268 61.2
SalBow2G2585 Salvia bowleyana HOM05D002970 ORTHO05D009571 5.5e-76 288.5 223 65.5
Gohir.D05G312700 Gossypium hirsutum HOM05D002970 ORTHO05D009571 7.1e-76 288.1 288 56.6
PSO782G2321 Papaver somniferum HOM05D002970 ORTHO05D009571 2.1e-75 286.6 196 71.9
ATR0824G068 Amborella trichopoda HOM05D002970 ORTHO05D009571 1.1e-73 280.8 279 54.5
Lj4g0006456 Lotus japonicus HOM05D002970 ORTHO05D009571 2.8e-72 276.2 284 57.0
MD13G1107700 Malus domestica HOM05D002970 ORTHO05D009571 1.1e-71 274.2 251 61.4
Migut.K00672 Erythranthe guttata HOM05D002970 ORTHO05D009571 3.4e-70 269.2 269 56.1
TAR371G0312 Trochodendron aralioides HOM05D002970 ORTHO05D007037 4.5e-70 268.9 266 55.6
PSO063G2167 Papaver somniferum HOM05D002970 ORTHO05D009571 2.5e-68 263.1 240 58.3
HPP92_024537 Vanilla planifolia HOM05D002970 ORTHO05D009571 5.5e-68 261.9 208 60.6
AUR62005542 Chenopodium quinoa HOM05D002970 ORTHO05D009571 2.1e-67 260.0 277 53.1
CDE02G1212 Ceratophyllum demersum HOM05D002970 ORTHO05D009571 3.5e-67 259.2 260 54.2
Zm00001eb406400 Zea mays HOM05D002970 ORTHO05D009571 7.9e-67 258.1 256 51.6
Nn4g22479 Nelumbo nucifera HOM05D002970 ORTHO05D009571 3.9e-66 255.8 243 57.6
AUR62024190 Chenopodium quinoa HOM05D002970 ORTHO05D007037 5.1e-66 255.4 276 52.2
ClCG08G017480 Citrullus lanatus HOM05D002970 ORTHO05D009571 8.7e-66 254.6 313 52.4
Cpa.g.sc86.6 Carica papaya HOM05D002970 ORTHO05D009571 7.4e-65 251.5 377 43.0
Solyc05g014190.4 Solanum lycopersicum HOM05D002970 ORTHO05D009571 8.5e-61 238.0 213 58.7
TWI36G0308 Tripterygium wilfordii HOM05D002970 ORTHO05D009571 8.5e-61 238.0 248 57.7
Aa31LG2G6280 Aethionema arabicum HOM05D002970 ORTHO05D009571 1.1e-57 227.6 262 50.8
unitig_749.g13282 Utricularia gibba HOM05D002970 ORTHO05D009571 4.8e-56 222.2 142 73.9
Pp3c24_16920 Physcomitrium patens HOM05D002970 ORTHO05D009571 8.2e-48 194.9 235 43.8
Mapoly0082s0035 Marchantia polymorpha HOM05D002970 ORTHO05D009571 2.9e-45 186.4 215 43.3
Dinv14770 Davidia involucrata HOM05D002970 ORTHO05D009571 6.5e-45 185.3 185 57.3
AagrBONN_evm.TU.Sc2ySwM_344.962 Anthoceros agrestis HOM05D002970 ORTHO05D009571 8.8e-42 174.9 187 48.1
SMO365G0071 Selaginella moellendorffii HOM05D002970 ORTHO05D009571 9.7e-41 171.4 239 41.8
CSS0042994 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 8.2e-40 168.3 97 80.4
Glyma.05G172100 Glycine max HOM05D002970 ORTHO05D009571 1.0e-37 161.4 145 62.1
Sed0000980 Sechium edule HOM05D002970 ORTHO05D009571 4.2e-36 156.0 162 54.9
MSTRG.542 Avicennia marina HOM05D002970 ORTHO05D009571 2.7e-35 153.3 166 50.0
CBR_g20339 Chara braunii HOM05D002970 ORTHO05D009571 1.6e-27 127.5 180 40.0
PRCOL_00001586 Prasinoderma coloniale HOM05D002970 ORTHO05D009571 2.7e-27 126.7 190 37.4
DCAR_007026 Daucus carota HOM05D002970 ORTHO05D007037 1.5e-25 120.9 181 44.8
CiPaw.09G014900 Carya illinoinensis HOM05D002970 ORTHO05D009571 8.3e-24 115.2 106 60.4
CiPaw.11G163100 Carya illinoinensis HOM05D002970 ORTHO05D009571 8.3e-24 115.2 106 60.4
arahy.Tifrunner.gnm1.ann1.WDY3XU Arachis hypogaea HOM05D002970 ORTHO05D009571 8.5e-21 105.1 137 51.8
Cre12.g556150 Chlamydomonas reinhardtii HOM05D002970 ORTHO05D009571 9.5e-20 101.7 216 31.0
MBI11_g22623_MAGBIO Magnolia biondii HOM05D002970 ORTHO05D009571 8.0e-19 98.6 90 56.7
MCO09G664 Micromonas commoda HOM05D002970 ORTHO05D009571 2.6e-17 93.6 117 39.3
Glyma.06G231900 Glycine max HOM05D002970 ORTHO05D009571 7.5e-17 92.0 62 71.0
SEGI_41532 Sequoiadendron giganteum HOM05D031330 ORTHO05D009571 2.8e-16 90.1 163 35.6


User provided reference genes

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