Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p053410 Quercus lobata HOM05D007699 ORTHO05D009796 1.7e-44 182.2 85 100.0
Potri.011G103401 Populus trichocarpa HOM05D007699 ORTHO05D009796 6.3e-15 84.0 44 86.4
Phvul.008G062500 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 1.4e-14 82.8 45 84.4
arahy.Tifrunner.gnm1.ann1.3J1SD9 Arachis hypogaea HOM05D007699 ORTHO05D009796 1.8e-14 82.4 43 88.4
Potri.011G103301 Populus trichocarpa HOM05D007699 ORTHO05D009796 1.8e-14 82.4 43 86.0
FAN11G1327 Fragaria x ananassa HOM05D007699 ORTHO05D009796 2.4e-14 82.0 40 92.5
Mapoly0020s0143 Marchantia polymorpha HOM05D007699 ORTHO05D009796 3.1e-14 81.6 46 80.4
Mapoly0086s0020 Marchantia polymorpha HOM05D007699 ORTHO05D009796 3.1e-14 81.6 55 72.7
Medtr3g084270 Medicago truncatula HOM05D007699 ORTHO05D009796 3.1e-14 81.6 57 71.9
TPR.G38695 Trifolium pratense HOM05D000020 ORTHO05D000543 4.1e-14 81.3 38 97.4
A05p18230 Brassica napus HOM05D007699 ORTHO05D009796 5.3e-14 80.9 51 76.5
Phvul.001G066700 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 5.3e-14 80.9 46 82.6
Migut.J00839 Erythranthe guttata HOM05D007699 ORTHO05D009796 6.9e-14 80.5 43 86.0
FAN08G2016 Fragaria x ananassa HOM05D007699 ORTHO05D009796 6.9e-14 80.5 46 80.4
FAN11G3494 Fragaria x ananassa HOM05D007699 ORTHO05D009796 6.9e-14 80.5 36 100.0
Medtr3g105890 Medicago truncatula HOM05D007699 ORTHO05D009796 6.9e-14 80.5 43 90.7
arahy.Tifrunner.gnm1.ann1.3C01L3 Arachis hypogaea HOM05D007699 ORTHO05D009796 9.0e-14 80.1 36 100.0
C03p91420 Brassica napus HOM05D007699 ORTHO05D009796 9.0e-14 80.1 38 94.7
FvH4_3g13700 Fragaria vesca HOM05D007699 ORTHO05D009796 9.0e-14 80.1 39 92.3
FAN18G1300 Fragaria x ananassa HOM05D005738 ORTHO05D007135 9.0e-14 80.1 36 100.0
FAN18G3749 Fragaria x ananassa HOM05D005738 ORTHO05D007135 9.0e-14 80.1 36 100.0
Nitab4.5_0005352g0040 Nicotiana tabacum HOM05D007699 ORTHO05D009796 9.0e-14 80.1 40 90.0
Phvul.001G084100 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 9.0e-14 80.1 36 100.0
Prupe.7G080000 Prunus persica HOM05D007699 ORTHO05D009796 9.0e-14 80.1 36 100.0
Hma1.2p1_0886F.1_g232660 Hydrangea macrophylla HOM05D007699 ORTHO05D009796 1.2e-13 79.7 40 87.5
Hma1.2p1_0886F.1_g232685 Hydrangea macrophylla HOM05D007699 ORTHO05D009796 1.2e-13 79.7 40 87.5
Carub.0003s1340 Capsella rubella HOM05D007699 ORTHO05D009796 1.5e-13 79.3 36 97.2
CARHR185520 Cardamine hirsuta HOM05D007699 ORTHO05D009796 1.5e-13 79.3 36 97.2
TPR.G12299 Trifolium pratense HOM05D007699 ORTHO05D009796 1.5e-13 79.3 36 97.2
Prupe.7G069600 Prunus persica HOM05D007699 ORTHO05D009796 2.0e-13 79.0 45 82.2
CARHR088640 Cardamine hirsuta HOM05D007699 ORTHO05D009796 2.6e-13 78.6 35 100.0
FAN13G3199 Fragaria x ananassa HOM05D007699 ORTHO05D009796 2.6e-13 78.6 39 89.7
Manes.11G145650 Manihot esculenta HOM05D007699 ORTHO05D009796 2.6e-13 78.6 40 87.5
Phvul.001G066900 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 2.6e-13 78.6 35 100.0
Sopen12g028800 Solanum pennellii HOM05D007699 ORTHO05D009796 2.6e-13 78.6 35 100.0
FAN08G0324 Fragaria x ananassa HOM05D007699 ORTHO05D009796 4.5e-13 77.8 38 92.1
Gohir.D06G068332 Gossypium hirsutum HOM05D007699 ORTHO05D009796 4.5e-13 77.8 53 73.6
Solyc12g056290.2 Solanum lycopersicum HOM05D007699 ORTHO05D009796 1.3e-12 76.3 42 83.3
GSVIVG01037330001 Vitis vinifera HOM05D007699 ORTHO05D009796 1.3e-12 76.3 40 87.5
EL10Ac6g13349 Beta vulgaris HOM05D007699 ORTHO05D009796 3.8e-12 74.7 47 74.5
Ciclev10018283m.g Citrus clementina HOM05D007699 ORTHO05D009796 3.8e-12 74.7 46 76.1
Pp3c15_10810 Physcomitrium patens HOM05D007699 ORTHO05D009796 5.0e-12 74.3 43 81.4
Pp3c15_10813 Physcomitrium patens HOM05D007699 ORTHO05D009796 5.0e-12 74.3 43 81.4
Pp3c15_10820 Physcomitrium patens HOM05D007699 ORTHO05D009796 5.0e-12 74.3 43 81.4
EL10Ac6g13684 Beta vulgaris HOM05D007699 ORTHO05D009796 8.5e-12 73.6 74 58.1
Glyma.19G099100 Glycine max HOM05D007699 ORTHO05D009796 8.5e-12 73.6 41 82.9
EL10Ac6g13624 Beta vulgaris HOM05D007699 ORTHO05D009796 1.1e-11 73.2 36 91.7
EL10Ac6g13683 Beta vulgaris HOM05D007699 ORTHO05D009796 1.1e-11 73.2 36 91.7
Ah.10g036850 Amaranthus hybridus HOM05D007699 ORTHO05D009796 1.4e-11 72.8 36 91.7
Gorai.011G262200 Gossypium raimondii HOM05D007699 ORTHO05D009796 1.4e-11 72.8 38 86.8
Phvul.009G076400 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 1.4e-11 72.8 41 80.5
EL10Ac6g13685 Beta vulgaris HOM05D007699 ORTHO05D009796 1.9e-11 72.4 35 94.3
Medtr8g461450 Medicago truncatula HOM05D007699 ORTHO05D009796 1.9e-11 72.4 33 100.0
Pp3c1_6540 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.9e-11 72.4 38 89.5
TPR.G32688 Trifolium pratense HOM05D007699 ORTHO05D009796 1.9e-11 72.4 32 100.0
Gorai.010G079800 Gossypium raimondii HOM05D007699 ORTHO05D009796 2.5e-11 72.0 51 72.5
Medtr3g108610 Medicago truncatula HOM05D007699 ORTHO05D009796 3.2e-11 71.6 42 78.6
Nn7g36904 Nelumbo nucifera HOM05D007699 ORTHO05D009796 4.2e-11 71.2 51 66.7
Thecc.10G037500 Theobroma cacao HOM05D007699 ORTHO05D009796 5.5e-11 70.9 35 91.4
Pp3c10_15080 Physcomitrium patens HOM05D007699 ORTHO05D009796 7.2e-11 70.5 46 76.1
Pp3c10_15084 Physcomitrium patens HOM05D007699 ORTHO05D009796 7.2e-11 70.5 46 76.1
Pp3s1006_30 Physcomitrium patens HOM05D007699 ORTHO05D009796 7.2e-11 70.5 46 76.1
Pp3s638_22 Physcomitrium patens HOM05D007699 ORTHO05D009796 7.2e-11 70.5 46 76.1
Pp3s677_10 Physcomitrium patens HOM05D007699 ORTHO05D009796 7.2e-11 70.5 46 76.1
Pp3s677_11 Physcomitrium patens HOM05D007699 ORTHO05D009796 7.2e-11 70.5 46 76.1
EL10Ac6g13623 Beta vulgaris HOM05D007699 ORTHO05D009796 9.4e-11 70.1 31 100.0
Phvul.001G090500 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 9.4e-11 70.1 38 86.8
Pp3s677_20 Physcomitrium patens HOM05D007699 ORTHO05D009796 9.4e-11 70.1 35 91.4
Potri.005G055667 Populus trichocarpa HOM05D007699 ORTHO05D009796 9.4e-11 70.1 38 84.2
Pp3c1_26810 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.2e-10 69.7 34 94.1
Pp3c1_26830 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.2e-10 69.7 34 94.1
Potri.005G055534 Populus trichocarpa HOM05D007699 ORTHO05D009796 1.2e-10 69.7 32 96.9
Gohir.A11G277350 Gossypium hirsutum HOM05D007699 ORTHO05D009796 2.1e-10 68.9 32 96.9
Pp3c24_6960 Physcomitrium patens HOM05D007699 ORTHO05D009796 2.1e-10 68.9 42 76.2
Pp3c24_6961 Physcomitrium patens HOM05D007699 ORTHO05D009796 2.1e-10 68.9 42 76.2
CSS0021910 Camellia sinensis var. sinensis HOM05D007699 ORTHO05D009796 2.7e-10 68.6 41 80.5
CSS0023756 Camellia sinensis var. sinensis HOM05D007699 ORTHO05D009796 3.6e-10 68.2 36 88.9
FAN18G1871 Fragaria x ananassa HOM05D007699 ORTHO05D009796 3.6e-10 68.2 34 91.2
SHI29091 Sapria himalayana HOM05D007699 ORTHO05D009796 3.6e-10 68.2 37 91.9
arahy.Tifrunner.gnm1.ann1.C3EWW9 Arachis hypogaea HOM05D007699 ORTHO05D009796 6.1e-10 67.4 32 96.9
EL10Ac6g13625 Beta vulgaris HOM05D007699 ORTHO05D009796 6.1e-10 67.4 44 72.7
Carub.0006s3371 Capsella rubella HOM05D007699 ORTHO05D009796 6.1e-10 67.4 31 96.8
Pp3c21_2000 Physcomitrium patens HOM05D007699 ORTHO05D009796 7.9e-10 67.0 37 83.8
Pp3c21_2022 Physcomitrium patens HOM05D007699 ORTHO05D009796 7.9e-10 67.0 37 83.8
FAN11G3758 Fragaria x ananassa HOM05D007699 ORTHO05D009796 1.0e-09 66.6 30 100.0
Gorai.011G262800 Gossypium raimondii HOM05D007699 ORTHO05D009796 1.0e-09 66.6 30 100.0
PGSC0003DMG400029597 Solanum tuberosum HOM05D000312 ORTHO05D000221 1.0e-09 66.6 30 100.0
Pp3c24_16090 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.1e-08 63.2 60 53.3
Pp3c24_16091 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.1e-08 63.2 60 53.3
EL10Ac6g13621 Beta vulgaris HOM05D007699 ORTHO05D009796 3.3e-08 61.6 36 77.8
Medtr2g101670 Medicago truncatula HOM05D007699 ORTHO05D009796 9.7e-08 60.1 33 81.8
Medtr6g070990 Medicago truncatula HOM05D007699 ORTHO05D009796 6.3e-07 57.4 26 100.0
SHI28974 Sapria himalayana HOM05D007699 ORTHO05D009796 1.4e-06 56.2 48 62.5
CBR_g18975 Chara braunii HOM05D016315 ORTHO05D136335 6.9e-06 53.9 33 75.8
Pp3c27_1930 Physcomitrium patens HOM05D007699 ORTHO05D009796 6.9e-06 53.9 32 75.0


User provided reference genes

Program Settings