Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p051584 Quercus lobata HOM05D007269 ORTHO05D008531 4.0e-112 408.3 236 100.0
CiPaw.05G106700 Carya illinoinensis HOM05D007269 ORTHO05D008531 5.7e-58 228.4 242 63.2
CiPaw.06G105600 Carya illinoinensis HOM05D007269 ORTHO05D008531 1.4e-56 223.8 240 55.8
Thecc.02G201200 Theobroma cacao HOM05D007269 ORTHO05D008531 9.1e-40 167.9 246 44.7
Potri.001G059800 Populus trichocarpa HOM05D007269 ORTHO05D008531 2.7e-39 166.4 237 45.6
CSS0016059 Camellia sinensis var. sinensis HOM05D007269 ORTHO05D008531 1.7e-38 163.7 244 43.4
MD16G1123500 Malus domestica HOM05D007269 ORTHO05D008531 3.3e-37 159.5 245 53.5
FvH4_4g23360 Fragaria vesca HOM05D007269 ORTHO05D008531 5.6e-37 158.7 246 48.8
Manes.13G008500 Manihot esculenta HOM05D007269 ORTHO05D008531 1.2e-36 157.5 240 47.1
Prupe.1G222200 Prunus persica HOM05D007269 ORTHO05D008531 6.1e-36 155.2 239 50.6
RcHm_v2.0_Chr4g0429751 Rosa chinensis HOM05D007269 ORTHO05D008531 1.4e-35 154.1 236 47.9
CANSAT01G1989 Cannabis sativa HOM05D007269 ORTHO05D008531 3.0e-35 152.9 239 43.9
Aqoxy3G01626 Aquilegia oxysepala HOM05D007269 ORTHO05D008531 2.6e-34 149.8 238 46.6
FAN12G4201 Fragaria x ananassa HOM05D007269 ORTHO05D008531 2.4e-32 143.3 235 47.7
Sabra03G0123300 Salix brachista HOM05D007269 ORTHO05D008531 2.4e-32 143.3 219 42.9
Manes.12G008000 Manihot esculenta HOM05D007269 ORTHO05D008531 4.1e-32 142.5 240 41.2
Cfa009391 Carpinus fangiana HOM05D007269 ORTHO05D008531 1.6e-31 140.6 180 61.1
Aqoxy5G03286 Aquilegia oxysepala HOM05D007269 ORTHO05D008531 2.0e-31 140.2 231 39.8
TAR374G0918 Trochodendron aralioides HOM05D007269 ORTHO05D008531 2.0e-31 140.2 168 48.2
Nn4g22252 Nelumbo nucifera HOM05D007269 ORTHO05D008531 2.5e-29 133.3 240 39.6
Potri.015G099800 Populus trichocarpa HOM05D007269 ORTHO05D008531 9.5e-29 131.3 235 37.4
FAN17G1902 Fragaria x ananassa HOM05D007269 ORTHO05D008531 1.2e-28 131.0 235 44.3
Nn3g16393 Nelumbo nucifera HOM05D007269 ORTHO05D008531 1.4e-27 127.5 237 43.9
MSTRG.7284 Avicennia marina HOM05D007269 ORTHO05D008531 2.3e-27 126.7 227 37.9
CSS0011599 Camellia sinensis var. sinensis HOM05D007269 ORTHO05D008531 4.0e-27 125.9 241 41.5
PGR119G1209 Punica granatum HOM05D007269 ORTHO05D008531 1.5e-26 124.0 237 39.2
ATR0582G094 Amborella trichopoda HOM05D007269 ORTHO05D008531 7.5e-26 121.7 235 37.9
Potri.003G168200 Populus trichocarpa HOM05D007269 ORTHO05D008531 7.5e-26 121.7 173 47.4
TAR622G0366 Trochodendron aralioides HOM05D007269 ORTHO05D008531 4.1e-24 115.9 199 46.7
Potri.012G101800 Populus trichocarpa HOM05D007269 ORTHO05D008531 9.2e-24 114.8 232 37.9
MBI07_g46909_MAGBIO Magnolia biondii HOM05D007269 ORTHO05D008531 2.0e-23 113.6 253 44.3
QL10p002347 Quercus lobata HOM05D007269 ORTHO05D008531 7.8e-23 111.7 230 38.3
Sabra12G0074700 Salix brachista HOM05D001095 ORTHO05D000976 7.8e-23 111.7 230 37.0
Gorai.002G023300 Gossypium raimondii HOM05D007269 ORTHO05D008531 1.3e-22 110.9 268 35.4
Ciclev10032794m.g Citrus clementina HOM05D007269 ORTHO05D008531 2.3e-22 110.2 227 36.6
Migut.M01219 Erythranthe guttata HOM05D007269 ORTHO05D008531 3.9e-22 109.4 236 37.7
Gohir.A01G022800 Gossypium hirsutum HOM05D007269 ORTHO05D008531 5.0e-22 109.0 262 37.8
Gohir.D01G020800 Gossypium hirsutum HOM05D007269 ORTHO05D008531 5.0e-22 109.0 272 35.3
Manes.14G048800 Manihot esculenta HOM05D007269 ORTHO05D008531 6.6e-22 108.6 229 34.1
Sabra15G0120500 Salix brachista HOM05D007269 ORTHO05D008531 1.9e-21 107.1 226 34.1
Thecc.03G133000 Theobroma cacao HOM05D007269 ORTHO05D008531 4.3e-21 105.9 235 35.3
Cc11_g17250 Coffea canephora HOM05D007269 ORTHO05D008531 1.6e-20 104.0 240 36.7
Atru.chr6.1845 Acer truncatum HOM05D007269 ORTHO05D008531 1.4e-19 100.9 229 33.2
CiPaw.11G004900 Carya illinoinensis HOM05D007269 ORTHO05D008531 1.8e-19 100.5 235 36.6
Ciclev10032833m.g Citrus clementina HOM05D007269 ORTHO05D008531 6.8e-19 98.6 231 32.9
Duzib084G1105 Durio zibethinus HOM05D007269 ORTHO05D008531 6.8e-19 98.6 235 35.7
Oeu001328.1 Olea europaea HOM05D007269 ORTHO05D008531 8.9e-19 98.2 273 30.0
COL.COLO4_36213 Corchorus olitorius HOM05D007269 ORTHO05D008531 1.5e-18 97.4 236 34.3
Duzib068G0517 Durio zibethinus HOM05D007269 ORTHO05D008531 3.4e-18 96.3 235 33.2
CDE05G2305 Ceratophyllum demersum HOM05D007269 ORTHO05D008531 7.5e-18 95.1 220 39.1
Nitab4.5_0000021g1020 Nicotiana tabacum HOM05D007269 ORTHO05D008531 7.5e-18 95.1 238 31.5
RcHm_v2.0_Chr7g0189701 Rosa chinensis HOM05D007269 ORTHO05D008531 7.5e-18 95.1 249 33.3
PSO017G6998 Papaver somniferum HOM05D007269 ORTHO05D008531 2.9e-17 93.2 240 34.6
Prupe.5G148200 Prunus persica HOM05D007269 ORTHO05D008531 8.3e-17 91.7 237 35.0
MD06G1137900 Malus domestica HOM05D007269 ORTHO05D008531 1.4e-16 90.9 239 34.3
Lsat_1_v5_gn_4_82360 Lactuca sativa HOM05D007269 ORTHO05D008531 1.9e-16 90.5 231 31.2
FAN08G0669 Fragaria x ananassa HOM05D007269 ORTHO05D008531 3.2e-16 89.7 249 33.7
Oeu001326.1 Olea europaea HOM05D007269 ORTHO05D008531 5.4e-16 89.0 221 35.7
Oeu001327.1 Olea europaea HOM05D007269 ORTHO05D008531 5.4e-16 89.0 221 35.7
CAN.G732.21 Capsicum annuum HOM05D007269 ORTHO05D008531 7.1e-16 88.6 225 29.8
MD14G1153300 Malus domestica HOM05D007269 ORTHO05D008531 7.1e-16 88.6 230 37.8
Nitab4.5_0002530g0020 Nicotiana tabacum HOM05D007269 ORTHO05D008531 9.2e-16 88.2 229 31.0
Sc22g0003750 Simmondsia chinensis HOM05D007269 ORTHO05D008531 1.2e-15 87.8 97 44.3
FvH4_5g08680 Fragaria vesca HOM05D007269 ORTHO05D008531 1.6e-15 87.4 248 32.7
FAN18G2199 Fragaria x ananassa HOM05D007269 ORTHO05D008531 1.6e-15 87.4 248 32.7
HanXRQChr05g0153821 Helianthus annuus HOM05D007269 ORTHO05D008531 1.6e-15 87.4 245 30.2
FAN28G2669 Fragaria x ananassa HOM05D007269 ORTHO05D008531 2.1e-15 87.0 241 33.2
HanXRQChr09g0273431 Helianthus annuus HOM05D007269 ORTHO05D008531 2.7e-15 86.7 232 29.7
Lalb_Chr07g0183561 Lupinus albus HOM05D007269 ORTHO05D008531 3.5e-15 86.3 233 32.2
DCAR_021637 Daucus carota HOM05D007269 ORTHO05D008531 6.0e-15 85.5 229 33.2
FAN13G1779 Fragaria x ananassa HOM05D007269 ORTHO05D008531 7.8e-15 85.1 247 33.2
FAN06G3947 Fragaria x ananassa HOM05D007269 ORTHO05D008531 1.0e-14 84.7 242 32.2
HanXRQChr08g0236471 Helianthus annuus HOM05D007269 ORTHO05D008531 1.0e-14 84.7 239 29.3
Migut.K01007 Erythranthe guttata HOM05D007269 ORTHO05D008531 1.7e-14 84.0 240 31.2
Gorai.008G207700 Gossypium raimondii HOM05D007269 ORTHO05D008531 3.0e-14 83.2 229 31.0
Oeu012652.1 Olea europaea HOM05D007269 ORTHO05D008531 5.1e-14 82.4 163 36.2
Gohir.D12G192900 Gossypium hirsutum HOM05D007269 ORTHO05D008531 6.6e-14 82.0 228 31.1
ECA232G3539 Erigeron canadensis HOM05D007269 ORTHO05D008531 4.3e-13 79.3 145 34.5
Gohir.A12G190800 Gossypium hirsutum HOM05D007269 ORTHO05D008531 4.3e-13 79.3 229 30.6
MBI07_g27870_MAGBIO Magnolia biondii HOM05D007269 ORTHO05D008531 5.6e-13 79.0 193 42.0
Zm00001eb142990 Zea mays HOM05D007269 ORTHO05D008531 5.6e-13 79.0 134 37.3
Solyc03g097430.1 Solanum lycopersicum HOM05D007269 ORTHO05D008531 1.2e-12 77.8 233 27.5
PGSC0003DMG400026484 Solanum tuberosum HOM05D007269 ORTHO05D008531 1.6e-12 77.4 233 27.5
Lj4g0016206 Lotus japonicus HOM05D007269 ORTHO05D008531 2.1e-12 77.0 237 28.7
Sopen03g028190 Solanum pennellii HOM05D007269 ORTHO05D008531 2.8e-12 76.6 101 34.7
Lalb_Chr13g0297191 Lupinus albus HOM05D007269 ORTHO05D008531 4.7e-12 75.9 232 29.7
Phvul.002G285300 Phaseolus vulgaris HOM05D007269 ORTHO05D008531 6.2e-12 75.5 227 29.5
Os01g0924200 Oryza sativa ssp. japonica HOM05D007269 ORTHO05D008531 8.1e-12 75.1 124 38.7
Rhsim12G0023500 Rhododendron simsii HOM05D007269 ORTHO05D008531 4.0e-11 72.8 185 33.0
Sabra01G0042900 Salix brachista HOM05D007269 ORTHO05D008531 5.2e-11 72.4 88 52.3
TPR.G28777 Trifolium pratense HOM05D007269 ORTHO05D008531 8.9e-11 71.6 229 29.3
DCAR_021638 Daucus carota HOM05D007269 ORTHO05D008531 1.5e-10 70.9 244 29.9
Zm00001eb364140 Zea mays HOM05D007269 ORTHO05D008531 2.0e-10 70.5 179 31.8
Haze_07172 Corylus avellana HOM05D007269 ORTHO05D008531 3.4e-10 69.7 199 33.7
Cpa.g.sc4.165 Carica papaya HOM05D007269 ORTHO05D008531 4.4e-10 69.3 238 29.4
TAR629G3154 Trochodendron aralioides HOM05D007269 ORTHO05D008531 9.9e-10 68.2 151 47.0
Cfa018768 Carpinus fangiana HOM05D007269 ORTHO05D008531 1.7e-09 67.4 192 33.3
Psat7g036960 Pisum sativum HOM05D007269 ORTHO05D008531 4.9e-09 65.9 224 29.0
CsaV3_6G008060 Cucumis sativus L. HOM05D026927 ORTHO05D008531 1.1e-08 64.7 233 34.3
TWI18G0336 Tripterygium wilfordii HOM05D000350 ORTHO05D000228 1.1e-08 64.7 118 39.8
Os12g0460100 Oryza sativa ssp. japonica HOM05D007269 ORTHO05D008531 5.4e-08 62.4 211 29.4
PSO017G1627 Papaver somniferum HOM05D007269 ORTHO05D008531 1.2e-07 61.2 186 32.3
Sed0005097 Sechium edule HOM05D026927 ORTHO05D008531 1.6e-07 60.8 234 32.5


User provided reference genes

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