Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p050960 Quercus lobata HOM05D000003 ORTHO05D000167 6.8e-90 334.0 166 100.0
QL05p060814 Quercus lobata HOM05D000003 ORTHO05D000167 4.0e-26 122.1 109 55.0
QL07p030179 Quercus lobata HOM05D000003 ORTHO05D000167 1.0e-21 107.5 109 50.5
QL07p013392 Quercus lobata HOM05D000003 ORTHO05D000167 2.3e-21 106.3 109 47.7
QL07p036969 Quercus lobata HOM05D000003 ORTHO05D000167 2.3e-21 106.3 109 46.8
QL93p0138_0008 Quercus lobata HOM05D000003 ORTHO05D000167 1.1e-20 104.0 109 46.8
QL05p005727 Quercus lobata HOM05D000432 ORTHO05D000320 9.7e-20 100.9 109 45.9
QL07p015398 Quercus lobata HOM05D000003 ORTHO05D000167 2.2e-19 99.8 100 49.0
QL04p012103 Quercus lobata HOM05D000003 ORTHO05D000167 8.2e-19 97.8 109 43.1
QL02p100702 Quercus lobata HOM05D000003 ORTHO05D000167 1.4e-18 97.1 83 56.6
QL02p011178 Quercus lobata HOM05D001870 ORTHO05D001797 2.2e-16 89.7 89 50.6
QL05p011804 Quercus lobata HOM05D000003 ORTHO05D000167 6.5e-16 88.2 80 55.0
QL09p052274 Quercus lobata HOM05D000021 ORTHO05D000010 1.2e-14 84.0 84 46.4
QL04p086866 Quercus lobata HOM05D000003 ORTHO05D000167 1.6e-14 83.6 107 38.3
QL05p002207 Quercus lobata HOM05D000003 ORTHO05D000167 2.7e-14 82.8 104 40.4
QL03p039168 Quercus lobata HOM05D000003 ORTHO05D000167 7.9e-14 81.3 69 55.1
QL07p015088 Quercus lobata HOM05D000003 ORTHO05D000167 1.8e-13 80.1 104 41.3
QL12p021712 Quercus lobata HOM05D000003 ORTHO05D000167 2.3e-13 79.7 109 40.4
QL02p081060 Quercus lobata HOM05D000003 ORTHO05D000167 5.1e-13 78.6 88 38.6
QL03p051530 Quercus lobata HOM05D000003 ORTHO05D000167 1.5e-12 77.0 98 37.8
QL06p044722 Quercus lobata HOM05D000003 ORTHO05D000167 5.7e-12 75.1 56 66.1
QL05p053348 Quercus lobata HOM05D000003 ORTHO05D000167 9.7e-12 74.3 109 35.8
QL05p012339 Quercus lobata HOM05D000003 ORTHO05D000167 1.3e-11 73.9 71 49.3
EL10As6g23665 Beta vulgaris HOM05D000003 ORTHO05D000167 8.2e-11 71.2 98 40.8
Sed0002375 Sechium edule HOM05D000003 ORTHO05D000167 1.1e-10 70.9 128 32.0
Duzib147G0364 Durio zibethinus HOM05D000003 ORTHO05D000167 1.4e-10 70.5 100 36.0
QL06p015708 Quercus lobata HOM05D000003 ORTHO05D000167 2.4e-10 69.7 67 47.8
Duzib027G0001 Durio zibethinus HOM05D000003 ORTHO05D000167 3.1e-10 69.3 100 36.0
QL06p011527 Quercus lobata HOM05D000003 ORTHO05D000167 4.1e-10 68.9 109 33.0
COL.COLO4_06144 Corchorus olitorius HOM05D009774 ORTHO05D000167 5.3e-10 68.6 99 37.4
EL10Ac4g09190 Beta vulgaris HOM05D000003 ORTHO05D000167 2.6e-09 66.2 95 38.9
EL10Ac1g01308 Beta vulgaris HOM05D000003 ORTHO05D000167 3.4e-09 65.9 107 38.3
QL11p032349 Quercus lobata HOM05D000003 ORTHO05D000167 3.4e-09 65.9 81 43.2
Dinv08915 Davidia involucrata HOM05D000003 ORTHO05D000167 4.5e-09 65.5 106 39.6
Atru.chr11.265 Acer truncatum HOM05D000003 ORTHO05D000004 5.9e-09 65.1 110 35.5
Atru.chr3.3369 Acer truncatum HOM05D000003 ORTHO05D000167 1.0e-08 64.3 98 38.8
AUR62016609 Chenopodium quinoa HOM05D000003 ORTHO05D000167 1.0e-08 64.3 92 39.1
QL11p009033 Quercus lobata HOM05D000003 ORTHO05D000004 1.0e-08 64.3 92 39.1
Atru.chr1.1375 Acer truncatum HOM05D000003 ORTHO05D000167 1.7e-08 63.5 101 37.6
Atru.chr11.1423 Acer truncatum HOM05D000003 ORTHO05D000167 1.7e-08 63.5 110 33.6
EL10Ac2g04068 Beta vulgaris HOM05D000003 ORTHO05D000167 1.7e-08 63.5 99 36.4
Sed0013469 Sechium edule HOM05D000003 ORTHO05D000167 1.7e-08 63.5 98 33.7
EL10Ac5g12505 Beta vulgaris HOM05D000003 ORTHO05D000167 2.2e-08 63.2 94 35.1
Atru.chr11.310 Acer truncatum HOM05D000003 ORTHO05D000167 2.9e-08 62.8 108 29.6
QL05p065428 Quercus lobata HOM05D000003 ORTHO05D000004 2.9e-08 62.8 108 34.3
CSS0043774 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000167 3.8e-08 62.4 109 33.0
Haze_27622 Corylus avellana HOM05D000003 ORTHO05D000167 3.8e-08 62.4 110 32.7
Duzib147G1095 Durio zibethinus HOM05D000003 ORTHO05D000167 3.8e-08 62.4 93 36.6
Atru.chr5.1598 Acer truncatum HOM05D000856 ORTHO05D000167 5.0e-08 62.0 110 33.6
Atru.chr6.748 Acer truncatum HOM05D000003 ORTHO05D000004 5.0e-08 62.0 110 34.5
CSS0000735 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000167 5.0e-08 62.0 106 32.1
QL08p031025 Quercus lobata HOM05D000003 ORTHO05D000004 5.0e-08 62.0 91 37.4
Prupe.4G143500 Prunus persica HOM05D000003 ORTHO05D000167 6.5e-08 61.6 110 32.7
Atru.chr10.362 Acer truncatum HOM05D000003 ORTHO05D000167 8.5e-08 61.2 97 35.1
EL10As6g23668 Beta vulgaris HOM05D000003 ORTHO05D000167 8.5e-08 61.2 107 35.5
QL10p045811 Quercus lobata HOM05D000003 ORTHO05D000004 8.5e-08 61.2 44 65.9
Atru.chr13.2074 Acer truncatum HOM05D000003 ORTHO05D000167 1.1e-07 60.8 110 33.6
Atru.chr2.2868 Acer truncatum HOM05D000003 ORTHO05D000004 1.1e-07 60.8 101 37.6
QL01p036379 Quercus lobata HOM05D000003 ORTHO05D000004 1.1e-07 60.8 109 33.0
Atru.chr13.1861 Acer truncatum HOM05D000003 ORTHO05D000167 1.4e-07 60.5 110 32.7
Atru.chr7.396 Acer truncatum HOM05D000003 ORTHO05D000167 1.4e-07 60.5 101 34.7
EL10Ac7g17531 Beta vulgaris HOM05D000003 ORTHO05D000004 1.4e-07 60.5 98 32.7
CSS0031955 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000167 1.9e-07 60.1 110 36.4
PSO210G5051 Papaver somniferum HOM05D000003 ORTHO05D001026 1.9e-07 60.1 106 33.0
QL04p037951 Quercus lobata HOM05D000003 ORTHO05D000167 1.9e-07 60.1 43 67.4
AUR62013413 Chenopodium quinoa HOM05D000003 ORTHO05D000167 2.5e-07 59.7 98 34.7
Prupe.6G123900 Prunus persica HOM05D000003 ORTHO05D000004 2.5e-07 59.7 109 33.0
QL03p073750 Quercus lobata HOM05D005225 ORTHO05D006830 2.5e-07 59.7 111 30.6
Atru.chr1.3769 Acer truncatum HOM05D000003 ORTHO05D000167 3.2e-07 59.3 110 33.6
EL10Ac7g18097 Beta vulgaris HOM05D000003 ORTHO05D000167 3.2e-07 59.3 107 31.8
AUR62034867 Chenopodium quinoa HOM05D000003 ORTHO05D000167 3.2e-07 59.3 97 37.1
QL03p071069 Quercus lobata HOM05D000003 ORTHO05D000126 3.2e-07 59.3 54 50.0
Atru.chr13.1170 Acer truncatum HOM05D000003 ORTHO05D000167 4.2e-07 58.9 110 31.8
Atru.chr4.3086 Acer truncatum HOM05D000003 ORTHO05D000167 4.2e-07 58.9 98 32.7
Duzib132G0669 Durio zibethinus HOM05D000003 ORTHO05D000167 4.2e-07 58.9 101 34.7
Prupe.6G141500 Prunus persica HOM05D000003 ORTHO05D000167 4.2e-07 58.9 108 32.4
Sed0017704 Sechium edule HOM05D000003 ORTHO05D000167 4.2e-07 58.9 134 29.1
Atru.chr8.486 Acer truncatum HOM05D000003 ORTHO05D000004 5.5e-07 58.5 91 36.3
EL10Ac6g14583 Beta vulgaris HOM05D000003 ORTHO05D000167 5.5e-07 58.5 88 36.4
AUR62001182 Chenopodium quinoa HOM05D000003 ORTHO05D000167 5.5e-07 58.5 97 35.1
COL.COLO4_13164 Corchorus olitorius HOM05D009774 ORTHO05D000167 5.5e-07 58.5 109 30.3
COL.COLO4_20671 Corchorus olitorius HOM05D000003 ORTHO05D000167 5.5e-07 58.5 105 31.4
Prupe.1G205500 Prunus persica HOM05D000003 ORTHO05D000167 5.5e-07 58.5 94 34.0
Prupe.7G049300 Prunus persica HOM05D000003 ORTHO05D000004 5.5e-07 58.5 105 33.3
QL02p082090 Quercus lobata HOM05D000003 ORTHO05D000167 5.5e-07 58.5 109 37.6
QL03p051231 Quercus lobata HOM05D016498 ORTHO05D000167 5.5e-07 58.5 102 35.3
TWI18G1127 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 5.5e-07 58.5 100 39.0
CSS0016328 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000167 7.2e-07 58.2 97 36.1
QL05p029290 Quercus lobata HOM05D000003 ORTHO05D000126 7.2e-07 58.2 44 65.9
QL08p042055 Quercus lobata HOM05D000003 ORTHO05D000126 7.2e-07 58.2 50 50.0
RcHm_v2.0_Chr5g0047711 Rosa chinensis HOM05D008833 ORTHO05D000167 7.2e-07 58.2 106 34.9
Atru.chr1.1791 Acer truncatum HOM05D000003 ORTHO05D000167 9.4e-07 57.8 110 32.7
Atru.chr6.529 Acer truncatum HOM05D000003 ORTHO05D000167 9.4e-07 57.8 94 34.0
AUR62020673 Chenopodium quinoa HOM05D000003 ORTHO05D000167 9.4e-07 57.8 97 36.1
AUR62041508 Chenopodium quinoa HOM05D000003 ORTHO05D000167 1.2e-06 57.4 97 37.1
Dinv08495 Davidia involucrata HOM05D000003 ORTHO05D000167 1.2e-06 57.4 95 30.5
Dinv21289 Davidia involucrata HOM05D000079 ORTHO05D000211 1.2e-06 57.4 95 32.6
Prupe.6G203400 Prunus persica HOM05D000003 ORTHO05D000167 1.2e-06 57.4 104 30.8
Prupe.8G099500 Prunus persica HOM05D000003 ORTHO05D000167 1.2e-06 57.4 109 32.1
QL05p054879 Quercus lobata HOM05D000003 ORTHO05D000126 1.2e-06 57.4 165 27.3
QL11p012871 Quercus lobata HOM05D000003 ORTHO05D000167 1.2e-06 57.4 94 36.2
Atru.chr12.1232 Acer truncatum HOM05D000003 ORTHO05D000167 1.6e-06 57.0 110 32.7
Haze_05315 Corylus avellana HOM05D022711 ORTHO05D000126 1.6e-06 57.0 124 29.0
FvH4_7g03001 Fragaria vesca HOM05D010636 ORTHO05D011274 1.6e-06 57.0 103 31.1
QL03p066006 Quercus lobata HOM05D001020 ORTHO05D014173 1.6e-06 57.0 109 33.9
QL04p064882 Quercus lobata HOM05D000003 ORTHO05D000167 1.6e-06 57.0 109 33.9
QL06p048711 Quercus lobata HOM05D000027 ORTHO05D000066 1.6e-06 57.0 88 37.5
QL11p056556 Quercus lobata HOM05D000003 ORTHO05D000167 1.6e-06 57.0 97 34.0
Atru.chr6.1733 Acer truncatum HOM05D000003 ORTHO05D000167 2.1e-06 56.6 110 30.9
Atru.chr7.1015 Acer truncatum HOM05D000003 ORTHO05D000167 2.1e-06 56.6 95 34.7
Prupe.2G082600 Prunus persica HOM05D000003 ORTHO05D000167 2.1e-06 56.6 109 30.3
QL05p007523 Quercus lobata HOM05D000003 ORTHO05D000167 2.1e-06 56.6 98 32.7
QL05p068740 Quercus lobata HOM05D000003 ORTHO05D000004 2.1e-06 56.6 97 32.0
QL05p069113 Quercus lobata HOM05D000003 ORTHO05D000004 2.1e-06 56.6 97 32.0
QL10p030412 Quercus lobata HOM05D000003 ORTHO05D000167 2.1e-06 56.6 109 29.4
QL93p0215_0031 Quercus lobata HOM05D000003 ORTHO05D000167 2.1e-06 56.6 109 33.9
TAR331G0002 Trochodendron aralioides HOM05D000003 ORTHO05D000167 2.1e-06 56.6 109 28.4
Atru.chr8.695 Acer truncatum HOM05D000003 ORTHO05D000167 2.7e-06 56.2 110 32.7
EL10Ac2g03044 Beta vulgaris HOM05D000003 ORTHO05D000006 2.7e-06 56.2 111 34.2
Prupe.1G179300 Prunus persica HOM05D000003 ORTHO05D006737 2.7e-06 56.2 109 27.5
QL04p019512 Quercus lobata HOM05D000003 ORTHO05D000126 2.7e-06 56.2 50 56.0
QL09p001270 Quercus lobata HOM05D000003 ORTHO05D000167 2.7e-06 56.2 93 33.3
Atru.chr7.293 Acer truncatum HOM05D000003 ORTHO05D000167 3.6e-06 55.8 93 32.3
Atru.chr9.909 Acer truncatum HOM05D000003 ORTHO05D000004 3.6e-06 55.8 92 29.3
EL10Ac6g14087 Beta vulgaris HOM05D000003 ORTHO05D000167 3.6e-06 55.8 98 34.7
QL04p070148 Quercus lobata HOM05D000003 ORTHO05D000126 3.6e-06 55.8 50 52.0
RcHm_v2.0_Chr5g0066251 Rosa chinensis HOM05D000003 ORTHO05D011454 3.6e-06 55.8 91 34.1
Atru.chr4.1036 Acer truncatum HOM05D000003 ORTHO05D000167 4.7e-06 55.5 110 30.0
EL10Ac8g20356 Beta vulgaris HOM05D004408 ORTHO05D000006 4.7e-06 55.5 111 33.3
Duzib170G1141 Durio zibethinus HOM05D000003 ORTHO05D000167 4.7e-06 55.5 99 32.3
Atru.chr11.542 Acer truncatum HOM05D000003 ORTHO05D000167 6.1e-06 55.1 110 31.8
QL08p006218 Quercus lobata HOM05D000003 ORTHO05D000167 6.1e-06 55.1 92 35.9
EL10Ac9g22665 Beta vulgaris HOM05D000003 ORTHO05D000167 7.9e-06 54.7 92 32.6
CANSAT25G2443 Cannabis sativa HOM05D000003 ORTHO05D000004 7.9e-06 54.7 97 27.8
COL.COLO4_10225 Corchorus olitorius HOM05D000003 ORTHO05D000167 7.9e-06 54.7 109 29.4
QL02p009216 Quercus lobata HOM05D000003 ORTHO05D000167 7.9e-06 54.7 109 31.2
TWI14G0340 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 7.9e-06 54.7 99 32.3


User provided reference genes

Program Settings