Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p049668 Quercus lobata HOM05D006411 ORTHO05D007563 5.0e-134 481.1 241 100.0
Haze_12492 Corylus avellana HOM05D006411 ORTHO05D007563 1.1e-101 373.6 241 80.9
Cfa009441 Carpinus fangiana HOM05D006411 ORTHO05D007563 2.5e-101 372.5 244 79.9
TWI18G1006 Tripterygium wilfordii HOM05D006411 ORTHO05D007563 5.4e-96 354.8 243 71.6
Duzib132G0393 Durio zibethinus HOM05D006411 ORTHO05D007563 7.8e-95 350.9 244 70.1
Prupe.1G216800 Prunus persica HOM05D006411 ORTHO05D007563 6.6e-94 347.8 246 71.1
Atru.chr12.1401 Acer truncatum HOM05D006411 ORTHO05D007563 2.1e-92 342.8 240 70.8
GSVIVG01004943001 Vitis vinifera HOM05D006411 ORTHO05D007563 1.4e-91 340.1 243 67.9
Oeu044509.2 Olea europaea HOM05D006411 ORTHO05D007563 6.8e-91 337.8 242 67.4
TAR371G0942 Trochodendron aralioides HOM05D006411 ORTHO05D007563 8.9e-91 337.4 244 69.3
RcHm_v2.0_Chr4g0429021 Rosa chinensis HOM05D006411 ORTHO05D007563 1.5e-90 336.7 238 67.6
MD13G1129600 Malus domestica HOM05D006411 ORTHO05D007563 7.5e-90 334.3 245 67.8
Sabra03G0118900 Salix brachista HOM05D006411 ORTHO05D007563 2.2e-89 332.8 242 66.1
FvH4_4g22791 Fragaria vesca HOM05D006411 ORTHO05D007563 3.7e-89 332.0 238 66.0
Actinidia09598 Actinidia chinensis HOM05D006411 ORTHO05D007563 1.9e-88 329.7 240 67.9
FAN17G2521 Fragaria x ananassa HOM05D006411 ORTHO05D007563 2.4e-88 329.3 238 65.5
Dinv09212 Davidia involucrata HOM05D006411 ORTHO05D007563 3.2e-88 328.9 236 67.4
MD16G1129800 Malus domestica HOM05D006411 ORTHO05D007563 5.4e-88 328.2 245 65.7
Manes.09G187200 Manihot esculenta HOM05D006411 ORTHO05D007563 5.4e-88 328.2 245 65.7
FAN12G0338 Fragaria x ananassa HOM05D002780 ORTHO05D003254 7.8e-87 324.3 235 65.1
CSS0035608 Camellia sinensis var. sinensis HOM05D006411 ORTHO05D007563 3.0e-86 322.4 246 65.9
CsaV3_6G007790 Cucumis sativus L. HOM05D006411 ORTHO05D007563 1.9e-85 319.7 240 64.2
Gohir.A01G141100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 9.5e-85 317.4 246 65.9
CANSAT01G2250 Cannabis sativa HOM05D006411 ORTHO05D007563 2.1e-84 316.2 244 68.4
Thecc.02G193900 Theobroma cacao HOM05D006411 ORTHO05D007563 2.8e-84 315.8 205 73.2
MSTRG.461 Avicennia marina HOM05D006411 ORTHO05D007563 3.6e-84 315.5 241 64.7
Ciclev10005785m.g Citrus clementina HOM05D006411 ORTHO05D007563 3.6e-84 315.5 241 63.1
Gorai.002G163700 Gossypium raimondii HOM05D006411 ORTHO05D007563 1.1e-83 313.9 242 66.5
Sed0009782 Sechium edule HOM05D006411 ORTHO05D007563 1.8e-83 313.2 240 64.2
RhsimUnG0101400 Rhododendron simsii HOM05D006411 ORTHO05D007563 4.4e-82 308.5 239 63.6
Nn1g07843 Nelumbo nucifera HOM05D006411 ORTHO05D007563 1.3e-81 307.0 251 61.8
Nn3g20757 Nelumbo nucifera HOM05D006411 ORTHO05D007563 1.6e-79 300.1 223 67.7
Lsat_1_v5_gn_2_17720 Lactuca sativa HOM05D006411 ORTHO05D007563 3.5e-79 298.9 242 59.1
Aqoxy5G03164 Aquilegia oxysepala HOM05D006411 ORTHO05D007563 7.8e-79 297.7 212 68.4
CiPaw.05G102200 Carya illinoinensis HOM05D006411 ORTHO05D007563 2.3e-78 296.2 241 65.6
Migut.K01066 Erythranthe guttata HOM05D006411 ORTHO05D007563 2.3e-78 296.2 240 61.7
SalBow2G2156 Salvia bowleyana HOM05D006411 ORTHO05D007563 3.0e-78 295.8 242 60.7
SalBow7G1895 Salvia bowleyana HOM05D006411 ORTHO05D007563 3.0e-78 295.8 244 60.2
Solyc12g016210.2 Solanum lycopersicum HOM05D006411 ORTHO05D007563 3.0e-78 295.8 215 65.1
Sopen12g008000 Solanum pennellii HOM05D006411 ORTHO05D007563 3.0e-78 295.8 215 65.1
CAN.G529.4 Capsicum annuum HOM05D006411 ORTHO05D007563 6.6e-78 294.7 222 64.4
Nitab4.5_0003020g0130 Nicotiana tabacum HOM05D006411 ORTHO05D007563 8.1e-76 287.7 247 59.1
HanXRQChr17g0559141 Helianthus annuus HOM05D006411 ORTHO05D007563 1.4e-75 287.0 242 58.3
Lj3g0004314 Lotus japonicus HOM05D006411 ORTHO05D007563 1.8e-75 286.6 247 59.9
Ah.03g135590 Amaranthus hybridus HOM05D006411 ORTHO05D007563 6.8e-75 284.6 244 61.5
Cc11_g15120 Coffea canephora HOM05D006411 ORTHO05D007563 2.6e-74 282.7 258 57.0
VMungo1127G0609 Vigna mungo HOM05D006411 ORTHO05D007563 5.8e-74 281.6 244 59.0
Nitab4.5_0002671g0040 Nicotiana tabacum HOM05D006411 ORTHO05D007563 9.9e-74 280.8 221 62.4
Glyma.11G109300 Glycine max HOM05D006411 ORTHO05D007563 2.2e-73 279.6 228 61.4
Sc11g0000150 Simmondsia chinensis HOM05D006411 ORTHO05D007563 2.2e-73 279.6 196 69.4
Aa31LG8G9800 Aethionema arabicum HOM05D006411 ORTHO05D007563 1.9e-72 276.6 243 59.3
Sp3g20930 Schrenkiella parvula HOM05D006411 ORTHO05D007563 4.2e-72 275.4 238 59.2
PGR119G0335 Punica granatum HOM05D006411 ORTHO05D007563 9.3e-72 274.2 238 59.7
TPR.G28023 Trifolium pratense HOM05D006411 ORTHO05D007563 1.6e-71 273.5 223 62.3
Zm00001eb222220 Zea mays HOM05D006411 ORTHO05D007563 2.7e-71 272.7 236 58.1
BcaB06g26470 Brassica carinata HOM05D006411 ORTHO05D007563 3.5e-71 272.3 238 58.8
AT3G23255 Arabidopsis thaliana HOM05D006411 ORTHO05D007563 4.6e-71 271.9 242 59.5
AUR62031618 Chenopodium quinoa HOM05D006411 ORTHO05D007563 4.6e-71 271.9 251 57.4
PSO765G0094 Papaver somniferum HOM05D006411 ORTHO05D007563 4.6e-71 271.9 278 53.6
Actinidia34001 Actinidia chinensis HOM05D006411 ORTHO05D007563 6.0e-71 271.6 180 72.8
AL3G37910 Arabidopsis lyrata HOM05D006411 ORTHO05D007563 1.0e-70 270.8 236 61.0
PSO349G0017 Papaver somniferum HOM05D006411 ORTHO05D007563 1.0e-70 270.8 277 53.1
Psat7g169880 Pisum sativum HOM05D006411 ORTHO05D007563 1.3e-70 270.4 243 58.0
SGA_v2.0_scaffold80G25942 Striga asiatica HOM05D006411 ORTHO05D007563 1.7e-70 270.0 242 57.0
THA.LOC104808624 Tarenaya hassleriana HOM05D006411 ORTHO05D007563 3.0e-70 269.2 244 55.3
C07p14190 Brassica napus HOM05D006411 ORTHO05D007563 8.7e-70 267.7 237 58.2
BolC7t41915H Brassica oleracea HOM05D006411 ORTHO05D007563 8.7e-70 267.7 233 59.7
EL10Ac6g13598 Beta vulgaris HOM05D006411 ORTHO05D007563 1.1e-69 267.3 253 55.3
SHI04127 Sapria himalayana HOM05D006411 ORTHO05D007563 1.9e-69 266.5 246 54.5
ATR0751G011 Amborella trichopoda HOM05D006411 ORTHO05D006707 3.3e-69 265.8 214 60.3
Thhalv10021467m.g Eutrema salsugineum HOM05D006411 ORTHO05D007563 7.3e-69 264.6 238 58.0
Hund06130 Selenicereus undatus HOM05D006411 ORTHO05D007563 7.3e-69 264.6 262 53.8
ECA238G0094 Erigeron canadensis HOM05D006411 ORTHO05D007563 9.6e-69 264.2 209 59.8
Os10g0466100 Oryza sativa ssp. japonica HOM05D006411 ORTHO05D007563 9.6e-69 264.2 240 55.0
A07p09200 Brassica napus HOM05D006411 ORTHO05D007563 4.8e-68 261.9 210 65.7
BraA07t28715Z Brassica rapa HOM05D006411 ORTHO05D007563 4.8e-68 261.9 239 60.7
Ca_18949_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 4.8e-68 261.9 211 61.1
Ca_29765_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 4.8e-68 261.9 211 61.1
Carub.0003s2350 Capsella rubella HOM05D006411 ORTHO05D007563 1.1e-67 260.8 236 59.3
Gohir.D01G132100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 4.4e-66 255.4 191 68.1
MELO3C022353.2 Cucumis melo HOM05D006411 ORTHO05D007563 1.0e-62 244.2 197 61.4
CARHR099210 Cardamine hirsuta HOM05D006411 ORTHO05D007563 2.3e-62 243.0 203 61.6
vmacro10313 Vaccinium macrocarpon HOM05D006411 ORTHO05D007563 3.0e-62 242.7 171 69.0
HPP92_007040 Vanilla planifolia HOM05D006411 ORTHO05D007563 5.1e-62 241.9 216 55.1
SEGI_29411 Sequoiadendron giganteum HOM05D006411 ORTHO05D007563 2.8e-60 236.1 240 50.4
ClCG06G001760 Citrullus lanatus HOM05D006411 ORTHO05D007563 1.1e-59 234.2 180 62.8
Potri.003G163500 Populus trichocarpa HOM05D006411 ORTHO05D007563 2.2e-57 226.5 150 69.3
Phvul.011G018400 Phaseolus vulgaris HOM05D006411 ORTHO05D007563 4.9e-57 225.3 189 60.8
arahy.Tifrunner.gnm1.ann1.ZM7ZD1 Arachis hypogaea HOM05D006411 ORTHO05D007563 5.5e-56 221.9 249 50.2
Carub.0137s0001 Capsella rubella HOM05D006411 ORTHO05D007563 7.9e-55 218.0 169 64.5
Lalb_Chr19g0140051 Lupinus albus HOM05D006411 ORTHO05D007563 1.0e-54 217.6 246 50.4
Nn2g15361 Nelumbo nucifera HOM05D006411 ORTHO05D007563 1.1e-53 214.2 172 61.0
Lj5A251G70 Lonicera japonica HOM05D006411 ORTHO05D007563 1.5e-53 213.8 203 57.1
COL.COLO4_21790 Corchorus olitorius HOM05D006411 ORTHO05D007563 1.6e-52 210.3 240 50.4
Medtr4g078190 Medicago truncatula HOM05D006411 ORTHO05D007563 2.8e-52 209.5 134 71.6
Nn3g17917 Nelumbo nucifera HOM05D006411 ORTHO05D007563 5.3e-51 205.3 192 54.2
Pp3c2_21820 Physcomitrium patens HOM05D006411 ORTHO05D007563 2.2e-49 199.9 231 43.7
AUR62010749 Chenopodium quinoa HOM05D006411 ORTHO05D007563 3.9e-46 189.1 152 62.5
AUR62020519 Chenopodium quinoa HOM05D006411 ORTHO05D007563 5.9e-42 175.3 142 62.7
AagrBONN_evm.TU.Sc2ySwM_344.2329 Anthoceros agrestis HOM05D014047 ORTHO05D007563 1.3e-41 174.1 177 47.5
Lj5g0007299 Lotus japonicus HOM05D006411 ORTHO05D007563 2.1e-39 166.8 166 53.0
FvH4_4g07260 Fragaria vesca HOM05D006411 ORTHO05D007563 3.3e-37 159.5 93 76.3
Mapoly0164s0017 Marchantia polymorpha HOM05D006411 ORTHO05D007563 9.7e-37 157.9 229 40.6
CBR_g41204 Chara braunii HOM05D006411 ORTHO05D007563 4.5e-34 149.1 183 43.2
Nn7g35834 Nelumbo nucifera HOM05D006411 ORTHO05D007563 6.1e-23 112.1 75 66.7
SHI32270 Sapria himalayana HOM05D006411 ORTHO05D007563 6.1e-23 112.1 135 45.2
AUR62015683 Chenopodium quinoa HOM05D006411 ORTHO05D007563 1.7e-20 104.0 69 71.0
Dinv15386 Davidia involucrata HOM05D006411 ORTHO05D007563 3.7e-20 102.8 60 71.7
SMO119G0262 Selaginella moellendorffii HOM05D006411 ORTHO05D007563 1.4e-19 100.9 136 39.7
Nn7g35833 Nelumbo nucifera HOM05D006411 ORTHO05D007563 7.2e-16 88.6 67 64.2
Nn2g15434 Nelumbo nucifera HOM05D006411 ORTHO05D007563 1.2e-15 87.8 179 34.6
Peaxi162Scf00217g00911 Petunia axillaris HOM05D006411 ORTHO05D007563 1.5e-13 80.9 152 32.2
Glyma.12G016051 Glycine max HOM05D006411 ORTHO05D007563 7.5e-13 78.6 79 53.2
SGA_v2.0_scaffold360G49865 Striga asiatica HOM05D020805 ORTHO05D007563 1.4e-11 74.3 76 51.3
MCO06G175 Micromonas commoda HOM05D006411 ORTHO05D007563 5.3e-11 72.4 205 28.3
MBI05_g34743_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 2.0e-10 70.5 62 54.8
MBI02_g46060_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 3.5e-10 69.7 43 69.8
MBI04_g21533_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 2.2e-09 67.0 42 69.0
SalBow3G2205 Salvia bowleyana HOM05D006411 ORTHO05D007563 3.8e-09 66.2 92 40.2
QL12p005529 Quercus lobata HOM05D002896 ORTHO05D003263 6.1e-07 58.9 45 71.1
CAN.G1161.15 Capsicum annuum HOM05D000064 ORTHO05D007563 2.3e-06 57.0 41 56.1
AagrBONN_evm.TU.Sc2ySwM_344.2366 Anthoceros agrestis HOM05D006411 ORTHO05D007563 6.8e-06 55.5 73 41.1


User provided reference genes

Program Settings