Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p047068 Quercus lobata HOM05D006671 ORTHO05D008637 4.7e-166 587.8 297 100.0
CiPaw.03G010100 Carya illinoinensis HOM05D006671 ORTHO05D008637 2.6e-108 396.0 272 73.9
Atru.chr1.4182 Acer truncatum HOM05D006671 ORTHO05D008637 2.2e-99 366.3 279 68.8
Thecc.06G048900 Theobroma cacao HOM05D006671 ORTHO05D008637 2.2e-99 366.3 279 67.7
GSVIVG01026409001 Vitis vinifera HOM05D006671 ORTHO05D008637 1.3e-96 357.1 280 66.4
Duzib160G0342 Durio zibethinus HOM05D006671 ORTHO05D008637 3.0e-96 355.9 279 66.3
COL.COLO4_26801 Corchorus olitorius HOM05D006671 ORTHO05D008637 5.1e-96 355.1 286 64.7
MD09G1171100 Malus domestica HOM05D006671 ORTHO05D008637 5.1e-96 355.1 278 67.6
CSS0038482 Camellia sinensis var. sinensis HOM05D006671 ORTHO05D008637 6.6e-96 354.8 280 64.6
Haze_14039 Corylus avellana HOM05D006671 ORTHO05D008637 6.6e-96 354.8 251 74.1
Potri.001G161100 Populus trichocarpa HOM05D006671 ORTHO05D008637 2.5e-95 352.8 275 64.4
TWI59G0357 Tripterygium wilfordii HOM05D006671 ORTHO05D008637 6.9e-93 344.7 280 65.0
Prupe.3G029600 Prunus persica HOM05D006671 ORTHO05D008637 5.8e-92 341.7 276 65.2
TAR623G0926 Trochodendron aralioides HOM05D006671 ORTHO05D008637 5.8e-92 341.7 280 62.1
Eucgr.I02172 Eucalyptus grandis HOM05D006671 ORTHO05D008637 9.9e-92 340.9 288 61.1
Manes.11G010600 Manihot esculenta HOM05D006671 ORTHO05D008637 2.2e-91 339.7 269 65.1
Cpa.g.sc229.10 Carica papaya HOM05D006671 ORTHO05D008637 4.9e-91 338.6 284 58.1
Ciclev10025368m.g Citrus clementina HOM05D006671 ORTHO05D008637 3.2e-90 335.9 274 65.3
RcHm_v2.0_Chr2g0148251 Rosa chinensis HOM05D006671 ORTHO05D008637 1.3e-88 330.5 284 62.3
Glyma.16G015100 Glycine max HOM05D006671 ORTHO05D008637 1.8e-88 330.1 282 61.3
Gohir.D13G119900 Gossypium hirsutum HOM05D006671 ORTHO05D008637 5.1e-88 328.6 278 61.9
TPR.G26443 Trifolium pratense HOM05D006671 ORTHO05D008637 8.7e-88 327.8 282 60.3
vmacro18708 Vaccinium macrocarpon HOM05D006671 ORTHO05D008637 1.1e-87 327.4 282 61.0
Rhsim08G0246200 Rhododendron simsii HOM05D006671 ORTHO05D008637 3.3e-87 325.9 287 59.6
Gorai.013G134300 Gossypium raimondii HOM05D006671 ORTHO05D008637 4.3e-87 325.5 278 61.2
FAN09G2187 Fragaria x ananassa HOM05D006671 ORTHO05D008637 2.1e-86 323.2 283 59.4
Glyma.07G047100 Glycine max HOM05D006671 ORTHO05D008637 2.8e-86 322.8 273 60.8
FvH4_6g36250 Fragaria vesca HOM05D006671 ORTHO05D008637 6.2e-86 321.6 283 60.1
Sabra01G0131200 Salix brachista HOM05D006671 ORTHO05D008637 6.2e-86 321.6 262 61.8
Lalb_Chr10g0101031 Lupinus albus HOM05D006671 ORTHO05D008637 1.1e-85 320.9 280 58.6
Nn8g41287 Nelumbo nucifera HOM05D006671 ORTHO05D008637 1.4e-85 320.5 280 57.1
FAN14G1234 Fragaria x ananassa HOM05D006671 ORTHO05D008637 2.4e-85 319.7 283 59.4
Hma1.2p1_1104F.1_g257500 Hydrangea macrophylla HOM05D006671 ORTHO05D008637 2.4e-85 319.7 268 64.6
Psat4g165440 Pisum sativum HOM05D006671 ORTHO05D008637 2.4e-85 319.7 282 59.2
MBI13_g05970_MAGBIO Magnolia biondii HOM05D006671 ORTHO05D008637 3.1e-85 319.3 280 59.6
CANSAT56G3116 Cannabis sativa HOM05D006671 ORTHO05D008637 9.0e-85 317.8 286 61.9
Medtr8g023620 Medicago truncatula HOM05D006671 ORTHO05D008637 1.5e-84 317.0 271 61.3
Lj3g0013980 Lotus japonicus HOM05D006671 ORTHO05D008637 2.0e-84 316.6 282 58.2
Phvul.010G121800 Phaseolus vulgaris HOM05D006671 ORTHO05D008637 4.5e-84 315.5 273 60.4
Oeu006761.2 Olea europaea HOM05D006671 ORTHO05D008637 5.8e-84 315.1 280 56.1
Actinidia33812 Actinidia chinensis HOM05D006671 ORTHO05D008637 7.6e-84 314.7 318 53.5
Lj5C27T5 Lonicera japonica HOM05D006671 ORTHO05D008637 2.2e-83 313.2 283 59.7
PGR119G0898 Punica granatum HOM05D006671 ORTHO05D008637 1.4e-82 310.5 290 56.9
Sp1g40250 Schrenkiella parvula HOM05D006671 ORTHO05D008637 3.2e-82 309.3 276 57.6
DCAR_007665 Daucus carota HOM05D006671 ORTHO05D008637 5.5e-82 308.5 279 55.6
Thhalv10011378m.g Eutrema salsugineum HOM05D006671 ORTHO05D008637 1.6e-81 307.0 275 56.0
AL1G62410 Arabidopsis lyrata HOM05D006671 ORTHO05D008637 1.0e-80 304.3 275 55.3
AT1G53710 Arabidopsis thaliana HOM05D006671 ORTHO05D008637 1.8e-80 303.5 275 55.6
BcaB04g17063 Brassica carinata HOM05D006671 ORTHO05D008637 6.7e-80 301.6 275 57.1
CARHR044010 Cardamine hirsuta HOM05D006671 ORTHO05D008637 1.1e-79 300.8 276 55.8
Aqoxy2G04033 Aquilegia oxysepala HOM05D006671 ORTHO05D008637 1.5e-79 300.4 289 54.0
Carub.0001s4299 Capsella rubella HOM05D006671 ORTHO05D008637 5.6e-79 298.5 275 54.2
THA.LOC104822767 Tarenaya hassleriana HOM05D006671 ORTHO05D008637 7.4e-79 298.1 275 55.6
BraA08t32194Z Brassica rapa HOM05D006671 ORTHO05D008637 2.8e-78 296.2 275 57.1
BcaC01g01410 Brassica carinata HOM05D006671 ORTHO05D008637 4.8e-78 295.4 273 57.5
C03p91740 Brassica napus HOM05D006671 ORTHO05D008637 4.8e-78 295.4 273 57.5
BolC3t21495H Brassica oleracea HOM05D006671 ORTHO05D008637 4.8e-78 295.4 275 56.7
A08p01430 Brassica napus HOM05D006671 ORTHO05D008637 6.2e-78 295.0 275 57.1
Aa31LG10G1550 Aethionema arabicum HOM05D006671 ORTHO05D008637 1.4e-77 293.9 275 56.0
CAN.G390.42 Capsicum annuum HOM05D006671 ORTHO05D008637 1.4e-77 293.9 280 55.4
Sopen12g024210 Solanum pennellii HOM05D006671 ORTHO05D008637 1.5e-76 290.4 278 54.7
PGSC0003DMG402028844 Solanum tuberosum HOM05D006671 ORTHO05D008637 1.5e-76 290.4 278 55.4
Gohir.A13G116801 Gossypium hirsutum HOM05D006671 ORTHO05D008637 2.6e-76 289.7 253 61.7
arahy.Tifrunner.gnm1.ann1.YS0GDU Arachis hypogaea HOM05D006671 ORTHO05D008637 1.3e-75 287.3 268 56.7
FAN14G2634 Fragaria x ananassa HOM05D006671 ORTHO05D008637 2.2e-75 286.6 283 56.2
ECA234G0268 Erigeron canadensis HOM05D006671 ORTHO05D008637 2.9e-75 286.2 276 52.9
arahy.Tifrunner.gnm1.ann1.NMV212 Arachis hypogaea HOM05D006671 ORTHO05D008637 4.9e-75 285.4 268 56.0
MSTRG.9549 Avicennia marina HOM05D006671 ORTHO05D008637 6.5e-75 285.0 276 55.1
EL10Ac7g18235 Beta vulgaris HOM05D006671 ORTHO05D008637 1.1e-74 284.3 277 54.2
PGSC0003DMG401028844 Solanum tuberosum HOM05D006671 ORTHO05D008637 1.1e-74 284.3 278 54.3
Solyc12g055740.2 Solanum lycopersicum HOM05D006671 ORTHO05D008637 4.2e-74 282.3 278 53.6
Actinidia24409 Actinidia chinensis HOM05D006671 ORTHO05D008637 3.0e-72 276.2 233 59.7
SGA_v2.0_scaffold4G02101 Striga asiatica HOM05D006671 ORTHO05D008637 6.7e-72 275.0 279 53.0
AUR62001377 Chenopodium quinoa HOM05D006671 ORTHO05D008637 1.5e-71 273.9 285 50.2
PSO017G0187 Papaver somniferum HOM05D006671 ORTHO05D008637 5.7e-71 271.9 285 56.1
HanXRQChr10g0311581 Helianthus annuus HOM05D006671 ORTHO05D008637 7.4e-71 271.6 277 52.0
Sc12g0010960 Simmondsia chinensis HOM05D006671 ORTHO05D008637 7.4e-71 271.6 279 51.6
Cc04_g00530 Coffea canephora HOM05D006671 ORTHO05D008637 9.7e-71 271.2 280 50.0
AUR62044064 Chenopodium quinoa HOM05D006671 ORTHO05D008637 1.6e-70 270.4 276 51.1
Migut.D00903 Erythranthe guttata HOM05D006671 ORTHO05D008637 3.1e-69 266.2 276 50.7
SalBow7G2314 Salvia bowleyana HOM05D006671 ORTHO05D008637 2.6e-68 263.1 276 51.4
Ah.08g217540 Amaranthus hybridus HOM05D006671 ORTHO05D008637 1.8e-64 250.4 251 52.6
Os03g0397300 Oryza sativa ssp. japonica HOM05D006671 ORTHO05D008637 3.0e-64 249.6 278 49.6
HPP92_002242 Vanilla planifolia HOM05D006671 ORTHO05D008637 3.9e-64 249.2 275 51.3
SEGI_04788 Sequoiadendron giganteum HOM05D006671 ORTHO05D008637 1.4e-61 240.7 288 47.9
ATR0006G018 Amborella trichopoda HOM05D006671 ORTHO05D008637 5.3e-61 238.8 264 50.8
Zm00001eb392730 Zea mays HOM05D006671 ORTHO05D008637 3.8e-59 232.6 278 47.5
unitig_699.g19656 Utricularia gibba HOM05D006671 ORTHO05D001254 5.0e-59 232.3 285 48.8
Lsat_1_v5_gn_5_137600 Lactuca sativa HOM05D006671 ORTHO05D008637 1.1e-58 231.1 278 46.8
CDE06G0010 Ceratophyllum demersum HOM05D006671 ORTHO05D008637 2.7e-57 226.5 249 49.8
PSO170G0973 Papaver somniferum HOM05D006671 ORTHO05D008637 1.5e-55 220.7 187 65.2
Nitab4.5_0000357g0220 Nicotiana tabacum HOM05D006671 ORTHO05D008637 1.4e-53 214.2 219 55.3
Actinidia21851 Actinidia chinensis HOM05D006671 ORTHO05D008637 7.0e-53 211.8 193 59.1
MD17G1156100 Malus domestica HOM05D006671 ORTHO05D008637 1.0e-51 208.0 222 54.5
SEGI_35568 Sequoiadendron giganteum HOM05D006671 ORTHO05D008637 2.8e-46 189.9 174 56.3
SMO347G0345 Selaginella moellendorffii HOM05D006671 ORTHO05D008637 1.6e-44 184.1 257 42.8
BcaNung02916 Brassica carinata HOM05D006671 ORTHO05D008637 7.7e-44 181.8 276 39.5
AagrBONN_evm.TU.Sc2ySwM_362.1979 Anthoceros agrestis HOM05D006671 ORTHO05D008637 1.0e-43 181.4 262 37.8
Nitab4.5_0003469g0010 Nicotiana tabacum HOM05D006671 ORTHO05D008637 3.2e-42 176.4 272 42.6
Pp3c21_8010 Physcomitrium patens HOM05D006671 ORTHO05D008637 6.1e-41 172.2 264 42.4
Peaxi162Scf00177g00616 Petunia axillaris HOM05D006671 ORTHO05D008637 8.8e-40 168.3 278 40.3
FAN02G1271 Fragaria x ananassa HOM05D006671 ORTHO05D008637 4.4e-39 166.0 175 51.4
Dinv20369 Davidia involucrata HOM05D006671 ORTHO05D008637 3.7e-38 162.9 110 69.1
Ca_23471_v3 Cicer arietinum L. HOM05D006671 ORTHO05D008637 1.0e-35 154.8 272 37.9
Mapoly0048s0109 Marchantia polymorpha HOM05D006671 ORTHO05D008637 6.5e-35 152.1 260 34.6
FAN05G4676 Fragaria x ananassa HOM05D006671 ORTHO05D008637 1.8e-29 134.0 110 64.5
Lsat_1_v5_gn_2_122021 Lactuca sativa HOM05D006671 ORTHO05D008637 1.7e-19 100.9 138 42.8
C01p50010 Brassica napus HOM05D010519 ORTHO05D027459 6.4e-14 82.4 150 36.0
BolC1t04958H Brassica oleracea HOM05D010519 ORTHO05D027459 6.4e-14 82.4 150 36.0
Lsat_1_v5_gn_1_119700 Lactuca sativa HOM05D006671 ORTHO05D011576 7.0e-13 79.0 101 40.6
BcaC09g48416 Brassica carinata HOM05D006671 ORTHO05D027459 1.6e-12 77.8 115 41.7
Lsat_1_v5_gn_2_91241 Lactuca sativa HOM05D006671 ORTHO05D011576 1.6e-12 77.8 67 53.7
MCO09G741 Micromonas commoda HOM05D006671 ORTHO05D008637 2.0e-07 60.8 129 31.0
BcaB07g33306 Brassica carinata HOM05D000305 ORTHO05D000065 4.9e-06 56.2 30 76.7


User provided reference genes

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