Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p046578 Quercus lobata HOM05D006650 ORTHO05D008401 2.3e-157 558.9 294 100.0
Cfa008806 Carpinus fangiana HOM05D006650 ORTHO05D008401 4.7e-110 401.7 293 76.8
CiPaw.05G118400 Carya illinoinensis HOM05D006650 ORTHO05D008401 3.7e-107 392.1 304 73.4
Prupe.1G299800 Prunus persica HOM05D006650 ORTHO05D008401 1.2e-100 370.5 301 69.1
FAN17G3038 Fragaria x ananassa HOM05D006650 ORTHO05D008401 1.3e-96 357.1 297 66.3
FAN07G0603 Fragaria x ananassa HOM05D006650 ORTHO05D008401 1.9e-95 353.2 297 66.0
RcHm_v2.0_Chr4g0436681 Rosa chinensis HOM05D006650 ORTHO05D008401 2.1e-94 349.7 294 66.3
ClCG08G004790 Citrullus lanatus HOM05D006650 ORTHO05D008401 3.6e-94 349.0 288 68.8
Glyma.02G128500 Glycine max HOM05D006650 ORTHO05D008401 2.3e-93 346.3 287 68.3
arahy.Tifrunner.gnm1.ann1.1PS8SX Arachis hypogaea HOM05D006650 ORTHO05D008401 2.0e-92 343.2 280 68.6
CANSAT64G2403 Cannabis sativa HOM05D006650 ORTHO05D008401 3.4e-92 342.4 300 65.7
MD13G1052300 Malus domestica HOM05D006650 ORTHO05D008401 9.8e-92 340.9 293 66.6
Atru.chr11.1444 Acer truncatum HOM05D006650 ORTHO05D008401 1.7e-91 340.1 287 65.5
arahy.Tifrunner.gnm1.ann1.P12GZY Arachis hypogaea HOM05D006650 ORTHO05D008401 2.9e-91 339.3 282 67.7
Ca_04377_v3 Cicer arietinum L. HOM05D006650 ORTHO05D008401 3.7e-91 339.0 285 66.7
Psat1g085040 Pisum sativum HOM05D006650 ORTHO05D008401 1.1e-90 337.4 289 66.4
CsaV3_6G003950 Cucumis sativus L. HOM05D006650 ORTHO05D008401 1.9e-90 336.7 289 66.1
Lj2g0026821 Lotus japonicus HOM05D006650 ORTHO05D008401 7.0e-90 334.7 272 67.6
Manes.14G094300 Manihot esculenta HOM05D006650 ORTHO05D008401 9.2e-90 334.3 286 64.7
Phvul.003G034600 Phaseolus vulgaris HOM05D006650 ORTHO05D008401 1.2e-89 334.0 289 67.5
Medtr6g021510 Medicago truncatula HOM05D006650 ORTHO05D008401 1.6e-89 333.6 288 66.3
TWI75G1831 Tripterygium wilfordii HOM05D006650 ORTHO05D008401 6.0e-89 331.6 269 67.7
Sed0026335 Sechium edule HOM05D006650 ORTHO05D008401 3.0e-88 329.3 283 64.7
Lalb_Chr10g0099501 Lupinus albus HOM05D006650 ORTHO05D008401 3.9e-88 328.9 274 67.2
MELO3C011665.2 Cucumis melo HOM05D006650 ORTHO05D008401 6.6e-88 328.2 294 63.9
FAN12G1321 Fragaria x ananassa HOM05D006650 ORTHO05D008401 8.6e-88 327.8 303 62.7
Ciclev10032286m.g Citrus clementina HOM05D006650 ORTHO05D008401 1.5e-87 327.0 280 65.0
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 1.2e-84 317.4 233 71.7
Aqoxy3G03817 Aquilegia oxysepala HOM05D006650 ORTHO05D008401 3.4e-84 315.8 299 59.5
Rhsim09G0116700 Rhododendron simsii HOM05D006650 ORTHO05D008401 3.4e-84 315.8 304 59.5
TPR.G21643 Trifolium pratense HOM05D006650 ORTHO05D008401 2.2e-83 313.2 292 62.7
Duzib248G0229 Durio zibethinus HOM05D006650 ORTHO05D008401 4.9e-83 312.0 288 61.8
Rhsim09G0116200 Rhododendron simsii HOM05D006650 ORTHO05D008401 6.4e-83 311.6 302 59.6
PGR119G1187 Punica granatum HOM05D006650 ORTHO05D008401 1.4e-82 310.5 278 61.2
Hma1.2p1_1424F.1_g282740 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 5.4e-82 308.5 216 73.6
FAN22G1912 Fragaria x ananassa HOM05D006650 ORTHO05D008401 7.1e-82 308.1 343 56.0
ATR0691G055 Amborella trichopoda HOM05D006650 ORTHO05D008401 2.7e-81 306.2 214 73.4
Potri.T046554 Populus trichocarpa HOM05D006650 ORTHO05D008401 3.5e-81 305.8 305 60.0
COL.COLO4_27715 Corchorus olitorius HOM05D006650 ORTHO05D008401 4.6e-81 305.4 300 58.3
Potri.008G109700 Populus trichocarpa HOM05D006650 ORTHO05D008401 6.0e-81 305.1 307 59.6
THA.LOC104821976 Tarenaya hassleriana HOM05D006650 ORTHO05D008401 1.3e-80 303.9 271 62.4
PSO063G6309 Papaver somniferum HOM05D006650 ORTHO05D008401 2.3e-80 303.1 219 74.4
Actinidia32425 Actinidia chinensis HOM05D006650 ORTHO05D008401 2.5e-79 299.7 204 75.0
CARHR025730 Cardamine hirsuta HOM05D006650 ORTHO05D008401 2.5e-79 299.7 275 59.6
Thhalv10008392m.g Eutrema salsugineum HOM05D006650 ORTHO05D008401 2.5e-79 299.7 205 74.1
FvH4_4g28590 Fragaria vesca HOM05D006650 ORTHO05D008401 3.3e-79 299.3 259 65.3
Sabra08G0083500 Salix brachista HOM05D006650 ORTHO05D008401 7.3e-79 298.1 307 58.3
AL1G39570 Arabidopsis lyrata HOM05D006650 ORTHO05D008401 1.6e-78 297.0 205 72.7
GSVIVG01012028001 Vitis vinifera HOM05D006650 ORTHO05D008401 2.8e-78 296.2 192 78.1
PSO782G4155 Papaver somniferum HOM05D006650 ORTHO05D008401 3.6e-78 295.8 219 73.1
DCAR_023721 Daucus carota HOM05D006650 ORTHO05D008401 8.1e-78 294.7 276 61.2
Thecc.02G315100 Theobroma cacao HOM05D006650 ORTHO05D008401 1.1e-77 294.3 289 60.2
Sp1g22480 Schrenkiella parvula HOM05D006650 ORTHO05D008401 1.4e-77 293.9 205 72.7
Carub.0001s2478 Capsella rubella HOM05D006650 ORTHO05D008401 4.0e-77 292.4 275 57.8
Nitab4.5_0000259g0270 Nicotiana tabacum HOM05D006650 ORTHO05D008401 3.4e-76 289.3 268 59.7
Nitab4.5_0008828g0010 Nicotiana tabacum HOM05D006650 ORTHO05D008401 3.4e-76 289.3 268 59.7
Gohir.A04G144800 Gossypium hirsutum HOM05D006650 ORTHO05D008401 4.4e-76 288.9 298 58.1
BolC3t19565H Brassica oleracea HOM05D006650 ORTHO05D008401 7.6e-76 288.1 205 69.8
Gorai.012G184600 Gossypium raimondii HOM05D006650 ORTHO05D008401 7.6e-76 288.1 298 58.1
ECA246G1261 Erigeron canadensis HOM05D006650 ORTHO05D008401 1.7e-75 287.0 291 58.4
Cc11_g11090 Coffea canephora HOM05D006650 ORTHO05D008401 2.9e-75 286.2 214 67.3
Gohir.D04G189300 Gossypium hirsutum HOM05D006650 ORTHO05D008401 1.1e-74 284.3 298 58.1
Sopen05g006230 Solanum pennellii HOM05D006650 ORTHO05D008401 5.4e-74 282.0 290 54.5
TAR371G0285 Trochodendron aralioides HOM05D006650 ORTHO05D008401 1.2e-73 280.8 279 60.6
TAR371G1079 Trochodendron aralioides HOM05D006650 ORTHO05D008401 1.6e-73 280.4 279 60.2
VMungo1215G2545 Vigna mungo HOM05D006650 ORTHO05D008401 7.8e-73 278.1 240 67.5
CAN.G184.36 Capsicum annuum HOM05D006650 ORTHO05D008401 1.3e-72 277.3 286 54.9
HanXRQChr15g0475871 Helianthus annuus HOM05D006650 ORTHO05D008401 2.3e-72 276.6 238 63.9
Os02g0326000 Oryza sativa ssp. japonica HOM05D006650 ORTHO05D008401 3.0e-72 276.2 217 65.9
C03p72670 Brassica napus HOM05D006650 ORTHO05D008401 1.1e-71 274.2 229 62.4
Migut.L01126 Erythranthe guttata HOM05D006650 ORTHO05D008401 9.6e-71 271.2 212 64.6
MSTRG.800 Avicennia marina HOM05D006650 ORTHO05D008401 2.8e-70 269.6 231 60.6
Zm00001eb379060 Zea mays HOM05D006650 ORTHO05D008401 1.4e-69 267.3 206 67.5
Dinv16555 Davidia involucrata HOM05D006650 ORTHO05D008401 3.1e-69 266.2 174 77.6
Lsat_1_v5_gn_3_61200 Lactuca sativa HOM05D006650 ORTHO05D008401 5.2e-69 265.4 285 57.5
Lj8A100G102 Lonicera japonica HOM05D006650 ORTHO05D008401 1.7e-67 260.4 382 47.6
Oeu054561.2 Olea europaea HOM05D006650 ORTHO05D008401 1.7e-67 260.4 283 56.2
vmacro10492 Vaccinium macrocarpon HOM05D006650 ORTHO05D008401 1.7e-67 260.4 353 48.7
Sc11g0002870 Simmondsia chinensis HOM05D006650 ORTHO05D008401 2.1e-65 253.4 252 58.7
Hma1.2p1_1424F.1_g282730 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 6.0e-65 251.9 289 53.3
CSS0028658 Camellia sinensis var. sinensis HOM05D006650 ORTHO05D008401 7.8e-65 251.5 188 69.1
Hma1.2p1_1459F.1_g284910 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 1.0e-64 251.1 289 53.3
Pp3c15_17200 Physcomitrium patens HOM05D006650 ORTHO05D008401 1.3e-64 250.8 210 58.6
unitig_22.g6887 Utricularia gibba HOM05D006650 ORTHO05D008401 1.3e-64 250.8 212 60.4
AagrBONN_evm.TU.Sc2ySwM_228.1783 Anthoceros agrestis HOM05D006650 ORTHO05D008401 5.1e-64 248.8 207 61.8
MD16G1057600 Malus domestica HOM05D006650 ORTHO05D008401 8.7e-64 248.1 222 64.9
Aa31LG7G8830 Aethionema arabicum HOM05D006650 ORTHO05D008401 3.3e-63 246.1 203 63.1
Atru.chr11.1474 Acer truncatum HOM05D006650 ORTHO05D008401 4.8e-62 242.3 176 73.9
Mapoly0001s0402 Marchantia polymorpha HOM05D006650 ORTHO05D008401 1.1e-61 241.1 210 58.6
SMO239G0062 Selaginella moellendorffii HOM05D006650 ORTHO05D008401 2.0e-60 236.9 202 58.4
Peaxi162Scf00188g00428 Petunia axillaris HOM05D006650 ORTHO05D008401 9.9e-60 234.6 307 47.9
A08p27180 Brassica napus HOM05D006650 ORTHO05D008401 6.4e-59 231.9 195 63.6
BraA08t34664Z Brassica rapa HOM05D006650 ORTHO05D008401 6.4e-59 231.9 195 63.6
SalBow8G0131 Salvia bowleyana HOM05D006650 ORTHO05D008401 2.7e-57 226.5 286 48.6
Haze_11820 Corylus avellana HOM05D006650 ORTHO05D008401 3.0e-56 223.0 182 71.4
DCAR_026698 Daucus carota HOM05D006650 ORTHO05D008401 5.6e-55 218.8 236 55.9
SGA_v2.0_scaffold16G07854 Striga asiatica HOM05D006650 ORTHO05D008401 5.3e-53 212.2 318 46.9
Ah.02g127370 Amaranthus hybridus HOM05D006650 ORTHO05D008401 2.6e-52 209.9 146 72.6
MBI15_g22709_MAGBIO Magnolia biondii HOM05D006650 ORTHO05D008401 2.9e-51 206.5 133 78.2
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 1.2e-49 201.1 141 72.3
AUR62007783 Chenopodium quinoa HOM05D006650 ORTHO05D008401 1.9e-47 193.7 174 62.1
AUR62002977 Chenopodium quinoa HOM05D006650 ORTHO05D008401 9.6e-47 191.4 174 61.5
HPP92_021645 Vanilla planifolia HOM05D006650 ORTHO05D008401 3.2e-42 176.4 233 46.4
CBR_g18672 Chara braunii HOM05D006650 ORTHO05D008401 1.2e-41 174.5 214 43.5
PGSC0003DMG400007519 Solanum tuberosum HOM05D006650 ORTHO05D008401 7.9e-41 171.8 194 50.5
AT1G26180 Arabidopsis thaliana HOM05D006650 ORTHO05D008401 3.9e-40 169.5 112 74.1
AagrBONN_evm.TU.Sc2ySwM_228.1786 Anthoceros agrestis HOM05D006650 ORTHO05D008401 7.4e-39 165.2 142 58.5
Nn4g23629 Nelumbo nucifera HOM05D006650 ORTHO05D008401 1.1e-37 161.4 159 58.5
Cpa.g.sc1.261 Carica papaya HOM05D006650 ORTHO05D008401 1.2e-36 157.9 165 61.8
EL10Ac6g14586 Beta vulgaris HOM05D006650 ORTHO05D008401 6.5e-35 152.1 252 44.0
CBR_g25761 Chara braunii HOM05D006650 ORTHO05D008401 4.2e-34 149.4 190 42.6
CARHR153660 Cardamine hirsuta HOM05D006650 ORTHO05D008401 3.9e-32 142.9 115 61.7
SalBow8G0120 Salvia bowleyana HOM05D006650 ORTHO05D008401 1.9e-31 140.6 304 37.8
MCO03G393 Micromonas commoda HOM05D006650 ORTHO05D008401 4.4e-23 112.8 178 36.5
Cre07.g340150 Chlamydomonas reinhardtii HOM05D006650 ORTHO05D008401 9.7e-23 111.7 187 36.9
Hund05792 Selenicereus undatus HOM05D006650 ORTHO05D008401 1.7e-22 110.9 148 48.0
PRCOL_00002951 Prasinoderma coloniale HOM05D006650 ORTHO05D008401 1.5e-20 104.4 192 34.4
TAR629G1747 Trochodendron aralioides HOM05D006650 ORTHO05D000624 1.2e-17 94.7 80 61.2
Sabra10G0102400 Salix brachista HOM05D006650 ORTHO05D008401 1.4e-13 81.3 90 52.2
Peaxi162Scf00004g02825 Petunia axillaris HOM05D006650 ORTHO05D008401 2.0e-12 77.4 69 58.0
Zm00001eb068230 Zea mays HOM05D000001 ORTHO05D000003 3.2e-10 70.1 53 64.2
Eucgr.G02394 Eucalyptus grandis HOM05D006650 ORTHO05D008401 1.8e-08 64.3 124 44.4


User provided reference genes

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