Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p045855 Quercus lobata HOM05D007202 ORTHO05D009125 4.5e-147 525.4 469 100.0
QL12p025863 Quercus lobata HOM05D007202 ORTHO05D009125 1.8e-50 204.5 484 65.9
Dinv07880 Davidia involucrata HOM05D007202 ORTHO05D009125 2.9e-29 134.0 191 43.5
Lj3C848G3 Lonicera japonica HOM05D007202 ORTHO05D009125 6.5e-29 132.9 169 47.9
Peaxi162Scf00681g00018 Petunia axillaris HOM05D007202 ORTHO05D009125 1.4e-28 131.7 139 49.6
TAR622G0387 Trochodendron aralioides HOM05D007202 ORTHO05D009125 4.2e-28 130.2 173 44.5
Medtr1g114190 Medicago truncatula HOM05D000730 ORTHO05D009125 4.6e-27 126.7 183 51.4
Ca_11225_v3 Cicer arietinum L. HOM05D007202 ORTHO05D009125 7.9e-27 125.9 183 50.3
Haze_11774 Corylus avellana HOM05D007202 ORTHO05D009125 1.8e-26 124.8 127 59.1
TPR.G4127 Trifolium pratense HOM05D007202 ORTHO05D009125 6.7e-26 122.9 183 51.4
Hma1.2p1_2428F.1_g321970 Hydrangea macrophylla HOM05D007202 ORTHO05D009125 9.7e-25 119.0 177 54.8
Prupe.7G271800 Prunus persica HOM05D007202 ORTHO05D009125 2.8e-24 117.5 127 52.0
Actinidia21102 Actinidia chinensis HOM05D007202 ORTHO05D009125 4.8e-24 116.7 148 42.6
Cfa008759 Carpinus fangiana HOM05D007202 ORTHO05D009125 4.8e-24 116.7 130 56.9
Psat6g233440 Pisum sativum HOM05D007202 ORTHO05D009125 1.8e-23 114.8 183 39.3
Oeu037581.1 Olea europaea HOM05D007202 ORTHO05D009125 9.1e-23 112.5 176 46.6
arahy.Tifrunner.gnm1.ann1.U9PBTF Arachis hypogaea HOM05D007202 ORTHO05D009125 1.3e-21 108.6 241 29.9
Dinv07882 Davidia involucrata HOM05D007202 ORTHO05D009125 8.5e-21 105.9 83 63.9
RcHm_v2.0_Chr4g0408911 Rosa chinensis HOM05D007202 ORTHO05D009125 1.1e-20 105.5 208 46.2
COL.COLO4_33057 Corchorus olitorius HOM05D007202 ORTHO05D009125 7.2e-20 102.8 499 54.9
CiPaw.06G061800 Carya illinoinensis HOM05D007202 ORTHO05D009125 9.4e-20 102.4 118 53.4
ClCG01G011340 Citrullus lanatus HOM05D007202 ORTHO05D009125 2.1e-19 101.3 227 44.1
GSVIVG01026178001 Vitis vinifera HOM05D007202 ORTHO05D009125 7.9e-19 99.4 88 60.2
SGA_v2.0_scaffold102G29846 Striga asiatica HOM05D007202 ORTHO05D009125 1.1e-17 95.5 174 45.4
Atru.chr11.1126 Acer truncatum HOM05D007202 ORTHO05D009125 9.7e-17 92.4 75 61.3
TWI53G0827 Tripterygium wilfordii HOM05D007202 ORTHO05D009125 1.3e-16 92.0 208 41.8
Migut.I00254 Erythranthe guttata HOM05D007202 ORTHO05D009125 2.8e-16 90.9 173 45.1
AUR62017720 Chenopodium quinoa HOM05D007202 ORTHO05D009125 3.7e-16 90.5 334 32.9
Sopen04g004350 Solanum pennellii HOM05D007202 ORTHO05D009125 3.7e-16 90.5 102 48.0
FvH4_4g11722 Fragaria vesca HOM05D007202 ORTHO05D009125 4.8e-16 90.1 178 46.6
FvH4_4g11723 Fragaria vesca HOM05D007202 ORTHO05D009125 4.8e-16 90.1 178 46.6
FAN12G2678 Fragaria x ananassa HOM05D007202 ORTHO05D009125 6.3e-16 89.7 178 46.6
arahy.Tifrunner.gnm1.ann1.EU7MKH Arachis hypogaea HOM05D007202 ORTHO05D009125 8.2e-16 89.4 97 43.3
vmacro08165 Vaccinium macrocarpon HOM05D007202 ORTHO05D009125 1.1e-15 89.0 99 49.5
Thecc.02G157500 Theobroma cacao HOM05D007202 ORTHO05D009125 1.4e-15 88.6 65 63.1
FAN12G3533 Fragaria x ananassa HOM05D007202 ORTHO05D009125 1.8e-15 88.2 178 46.1
Eucgr.J00877 Eucalyptus grandis HOM05D007202 ORTHO05D009125 2.4e-15 87.8 214 40.7
FAN07G0522 Fragaria x ananassa HOM05D007202 ORTHO05D009125 4.1e-15 87.0 178 46.1
Ah.03g147890 Amaranthus hybridus HOM05D007202 ORTHO05D009125 7.0e-15 86.3 251 31.9
CSS0032654 Camellia sinensis var. sinensis HOM05D007202 ORTHO05D009125 7.0e-15 86.3 83 56.6
CSS0048316 Camellia sinensis var. sinensis HOM05D007202 ORTHO05D009125 7.0e-15 86.3 83 56.6
Duzib132G0783 Durio zibethinus HOM05D007202 ORTHO05D009125 7.0e-15 86.3 73 57.5
Gohir.D02G188900 Gossypium hirsutum HOM05D007202 ORTHO05D009125 9.1e-15 85.9 218 40.8
Sc10g0006710 Simmondsia chinensis HOM05D007202 ORTHO05D009125 1.2e-14 85.5 207 40.6
Nn7g37484 Nelumbo nucifera HOM05D007202 ORTHO05D009125 1.6e-14 85.1 114 41.2
PGR142G1500 Punica granatum HOM05D007202 ORTHO05D009125 1.6e-14 85.1 235 38.3
Ciclev10030697m.g Citrus clementina HOM05D007202 ORTHO05D009125 2.0e-14 84.7 135 38.5
SalBow5G3041 Salvia bowleyana HOM05D007202 ORTHO05D009125 2.0e-14 84.7 169 43.8
Potri.005G090600 Populus trichocarpa HOM05D007202 ORTHO05D009125 2.6e-14 84.3 96 47.9
Sabra05G0074700 Salix brachista HOM05D007202 ORTHO05D009125 2.6e-14 84.3 97 48.5
CANSAT54G1393 Cannabis sativa HOM05D007202 ORTHO05D009125 4.5e-14 83.6 96 50.0
Lalb_Chr02g0143591 Lupinus albus HOM05D007202 ORTHO05D009125 5.9e-14 83.2 96 41.7
SalBow5G0881 Salvia bowleyana HOM05D007202 ORTHO05D009125 5.9e-14 83.2 169 43.8
Sed0015759 Sechium edule HOM05D007202 ORTHO05D009125 1.0e-13 82.4 98 51.0
CsaV3_5G014410 Cucumis sativus L. HOM05D007202 ORTHO05D009125 3.8e-13 80.5 147 38.1
Aqoxy6G00861 Aquilegia oxysepala HOM05D007202 ORTHO05D009125 8.5e-13 79.3 111 39.6
Aqoxy5G02805 Aquilegia oxysepala HOM05D007202 ORTHO05D009125 1.1e-12 79.0 56 67.9
DCAR_026889 Daucus carota HOM05D007202 ORTHO05D009125 1.1e-12 79.0 95 42.1
CAN.G619.3 Capsicum annuum HOM05D007202 ORTHO05D009125 1.5e-12 78.6 101 44.6
Lj5g0012863 Lotus japonicus HOM05D007202 ORTHO05D009125 1.9e-12 78.2 92 44.6
Gohir.A03G165700 Gossypium hirsutum HOM05D007202 ORTHO05D009125 2.5e-12 77.8 65 55.4
Gorai.005G211700 Gossypium raimondii HOM05D007202 ORTHO05D009125 2.5e-12 77.8 65 55.4
EL10Ac9g22973 Beta vulgaris HOM05D007202 ORTHO05D009125 5.5e-12 76.6 208 39.9
Solyc04g009220.2 Solanum lycopersicum HOM05D007202 ORTHO05D009125 5.5e-12 76.6 97 45.4
MSTRG.22930 Avicennia marina HOM05D007202 ORTHO05D009125 9.4e-12 75.9 169 42.6
Nitab4.5_0009973g0040 Nicotiana tabacum HOM05D007202 ORTHO05D009125 9.4e-12 75.9 95 46.3
Thhalv10015588m.g Eutrema salsugineum HOM05D007202 ORTHO05D009125 1.2e-11 75.5 252 26.6
Nitab4.5_0006691g0020 Nicotiana tabacum HOM05D007202 ORTHO05D009125 1.2e-11 75.5 96 44.8
BolC9t59607H Brassica oleracea HOM05D007202 ORTHO05D009125 2.1e-11 74.7 242 26.0
Carub.0006s0720 Capsella rubella HOM05D007202 ORTHO05D009125 2.1e-11 74.7 249 26.5
PGSC0003DMG400032545 Solanum tuberosum HOM05D007202 ORTHO05D009125 2.1e-11 74.7 95 47.4
THA.LOC104800801 Tarenaya hassleriana HOM05D007202 ORTHO05D009125 2.1e-11 74.7 97 45.4
BraA10t44884Z Brassica rapa HOM05D007202 ORTHO05D009125 3.6e-11 73.9 241 22.4
Manes.10G042000 Manihot esculenta HOM05D007202 ORTHO05D009125 6.1e-11 73.2 119 37.8
Rhsim09G0070400 Rhododendron simsii HOM05D007202 ORTHO05D009125 6.1e-11 73.2 147 36.1
VMungo0720G1420 Vigna mungo HOM05D007202 ORTHO05D009125 1.0e-10 72.4 178 41.6
CAN.G298.25 Capsicum annuum HOM05D007202 ORTHO05D009125 1.4e-10 72.0 230 34.8
Cc07_g16390 Coffea canephora HOM05D007202 ORTHO05D009125 1.4e-10 72.0 87 47.1
ECA233G0992 Erigeron canadensis HOM05D000200 ORTHO05D001546 3.0e-10 70.9 241 26.1
AL6G18720 Arabidopsis lyrata HOM05D007202 ORTHO05D009125 4.0e-10 70.5 133 35.3
Phvul.007G015700 Phaseolus vulgaris HOM05D007202 ORTHO05D009125 5.2e-10 70.1 94 41.5
AT5G08310 Arabidopsis thaliana HOM05D007202 ORTHO05D009125 6.7e-10 69.7 137 34.3
ClCG01G011360 Citrullus lanatus HOM05D007202 ORTHO05D009125 6.7e-10 69.7 239 36.8
CARHR204810 Cardamine hirsuta HOM05D007202 ORTHO05D009125 8.8e-10 69.3 143 33.6
Aa31LG3G18260 Aethionema arabicum HOM05D007202 ORTHO05D009766 1.1e-09 68.9 135 35.6
Hund26048 Selenicereus undatus HOM05D007202 ORTHO05D009125 1.1e-09 68.9 205 38.0
Glyma.20G104200 Glycine max HOM05D007202 ORTHO05D009125 4.4e-09 67.0 177 40.1
MBI07_g03828_MAGBIO Magnolia biondii HOM05D007202 ORTHO05D009125 4.4e-09 67.0 107 39.3
C09p68630 Brassica napus HOM05D007202 ORTHO05D009125 2.8e-08 64.3 55 52.7
Sp6g34640 Schrenkiella parvula HOM05D007202 ORTHO05D009125 3.7e-08 63.9 135 31.9
HanXRQChr13g0392131 Helianthus annuus HOM05D007202 ORTHO05D009125 4.8e-08 63.5 129 33.3
A10p28370 Brassica napus HOM05D007202 ORTHO05D009125 6.3e-08 63.2 156 29.5
unitig_26.g9680 Utricularia gibba HOM05D007202 ORTHO05D009125 4.1e-07 60.5 137 29.2
Cfa008762 Carpinus fangiana HOM05D007202 ORTHO05D009125 1.6e-06 58.5 52 61.5
PSO782G4392 Papaver somniferum HOM05D007202 ORTHO05D009125 2.0e-06 58.2 117 28.2


User provided reference genes

Program Settings