Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p044193 Quercus lobata HOM05D006333 ORTHO05D007799 1.0e-114 416.8 209 100.0
CiPaw.05G169800 Carya illinoinensis HOM05D006333 ORTHO05D007799 1.3e-24 117.5 67 85.1
Cfa008751 Carpinus fangiana HOM05D006333 ORTHO05D007799 5.3e-23 112.1 134 48.5
Thecc.02G159600 Theobroma cacao HOM05D006333 ORTHO05D007799 5.8e-22 108.6 98 59.2
Gohir.A13G060400 Gossypium hirsutum HOM05D006333 ORTHO05D007799 1.7e-21 107.1 98 59.2
Gohir.D13G061500 Gossypium hirsutum HOM05D006333 ORTHO05D007799 1.7e-21 107.1 97 59.8
Prupe.1G347700 Prunus persica HOM05D006333 ORTHO05D007799 8.4e-21 104.8 67 77.6
Prupe.1G347900 Prunus persica HOM05D006333 ORTHO05D007799 8.4e-21 104.8 67 77.6
Duzib132G1109 Durio zibethinus HOM05D006333 ORTHO05D007799 1.1e-20 104.4 98 58.2
Eucgr.J00869 Eucalyptus grandis HOM05D006333 ORTHO05D007799 1.4e-20 104.0 67 70.1
COL.COLO4_08588 Corchorus olitorius HOM05D006333 ORTHO05D007799 2.5e-20 103.2 134 47.0
Dinv17616 Davidia involucrata HOM05D006333 ORTHO05D007799 4.2e-20 102.4 98 56.1
FvH4_4g36970 Fragaria vesca HOM05D006333 ORTHO05D007799 4.2e-20 102.4 134 47.0
FAN17G3063 Fragaria x ananassa HOM05D006333 ORTHO05D007799 5.5e-20 102.1 67 76.1
Lj3g0001632 Lotus japonicus HOM05D006333 ORTHO05D007799 7.1e-20 101.7 98 53.1
Potri.007G072000 Populus trichocarpa HOM05D006333 ORTHO05D007799 7.1e-20 101.7 98 55.1
Ciclev10032700m.g Citrus clementina HOM05D006333 ORTHO05D007799 9.3e-20 101.3 134 44.8
Sed0022709 Sechium edule HOM05D006333 ORTHO05D007799 1.2e-19 100.9 67 74.6
FAN12G1853 Fragaria x ananassa HOM05D006333 ORTHO05D007799 1.6e-19 100.5 133 46.6
MD13G1004800 Malus domestica HOM05D006333 ORTHO05D007799 1.6e-19 100.5 67 76.1
AL1G29580 Arabidopsis lyrata HOM05D006333 ORTHO05D007799 2.1e-19 100.1 67 77.6
FAN07G1904 Fragaria x ananassa HOM05D006333 ORTHO05D007799 2.1e-19 100.1 134 45.5
GSVIVG01012055001 Vitis vinifera HOM05D006333 ORTHO05D007799 2.1e-19 100.1 98 55.1
Glyma.12G026000 Glycine max HOM05D006333 ORTHO05D007799 2.7e-19 99.8 67 70.1
Phvul.011G028900 Phaseolus vulgaris HOM05D006333 ORTHO05D007799 3.5e-19 99.4 67 70.1
TPR.G9857 Trifolium pratense HOM05D006333 ORTHO05D007799 3.5e-19 99.4 67 71.6
BcaB07g34033 Brassica carinata HOM05D006333 ORTHO05D007799 4.6e-19 99.0 68 72.1
Manes.04G057700 Manihot esculenta HOM05D006333 ORTHO05D007799 6.0e-19 98.6 134 44.0
Aa31LG7G2140 Aethionema arabicum HOM05D006333 ORTHO05D007799 1.0e-18 97.8 98 53.1
AT1G17330 Arabidopsis thaliana HOM05D006333 ORTHO05D007799 1.0e-18 97.8 67 73.1
Carub.0001s1708 Capsella rubella HOM05D006333 ORTHO05D007799 1.0e-18 97.8 103 53.4
CsaV3_3G031750 Cucumis sativus L. HOM05D006333 ORTHO05D007799 1.0e-18 97.8 67 73.1
Eucgr.J00870 Eucalyptus grandis HOM05D006333 ORTHO05D007799 1.0e-18 97.8 72 63.9
Gorai.013G070000 Gossypium raimondii HOM05D006333 ORTHO05D007799 1.0e-18 97.8 103 55.3
Lalb_Chr01g0001411 Lupinus albus HOM05D006333 ORTHO05D007799 1.0e-18 97.8 98 54.1
Atru.chr11.2675 Acer truncatum HOM05D006333 ORTHO05D007799 1.3e-18 97.4 67 74.6
Atru.chr11.2676 Acer truncatum HOM05D006333 ORTHO05D007799 1.3e-18 97.4 67 74.6
CANSAT56G2519 Cannabis sativa HOM05D006333 ORTHO05D007799 1.8e-18 97.1 67 74.6
MELO3C024016.2 Cucumis melo HOM05D006333 ORTHO05D007799 1.8e-18 97.1 67 73.1
CARHR017920 Cardamine hirsuta HOM05D006333 ORTHO05D007799 2.3e-18 96.7 67 73.1
Psat7g233400 Pisum sativum HOM05D006333 ORTHO05D007799 2.3e-18 96.7 67 70.1
PSO782G2700 Papaver somniferum HOM05D006333 ORTHO05D007799 3.0e-18 96.3 96 51.0
BraA06t24479Z Brassica rapa HOM05D006333 ORTHO05D007799 5.1e-18 95.5 67 70.1
BcaC05g25649 Brassica carinata HOM05D006333 ORTHO05D007799 6.7e-18 95.1 67 70.1
A06p13260 Brassica napus HOM05D006333 ORTHO05D007799 6.7e-18 95.1 67 70.1
C05p15710 Brassica napus HOM05D006333 ORTHO05D007799 6.7e-18 95.1 67 70.1
BolC5t30276H Brassica oleracea HOM05D006333 ORTHO05D007799 6.7e-18 95.1 67 70.1
Hma1.2p1_0044F.1_g026090 Hydrangea macrophylla HOM05D006333 ORTHO05D007799 6.7e-18 95.1 97 52.6
Sp1g15450 Schrenkiella parvula HOM05D006333 ORTHO05D007799 6.7e-18 95.1 98 53.1
VMungo1127G0165 Vigna mungo HOM05D006333 ORTHO05D007799 6.7e-18 95.1 67 67.2
Ca_19901_v3 Cicer arietinum L. HOM05D006333 ORTHO05D007799 8.7e-18 94.7 67 68.7
Medtr4g023480 Medicago truncatula HOM05D006333 ORTHO05D007799 8.7e-18 94.7 67 70.1
TWI53G1586 Tripterygium wilfordii HOM05D006333 ORTHO05D007799 8.7e-18 94.7 67 65.7
ClCG10G012010 Citrullus lanatus HOM05D006333 ORTHO05D007799 1.1e-17 94.4 65 72.3
PGR044G2499 Punica granatum HOM05D006333 ORTHO05D007799 1.1e-17 94.4 134 42.5
TAR629G0175 Trochodendron aralioides HOM05D006333 ORTHO05D007799 1.1e-17 94.4 66 68.2
ECA233G4371 Erigeron canadensis HOM05D006333 ORTHO05D007799 1.5e-17 94.0 67 70.1
RcHm_v2.0_Chr4g0446761 Rosa chinensis HOM05D006333 ORTHO05D007799 1.5e-17 94.0 134 44.8
Atru.chr11.1164 Acer truncatum HOM05D006333 ORTHO05D007799 1.9e-17 93.6 134 44.8
Hund24376 Selenicereus undatus HOM05D006333 ORTHO05D007799 1.9e-17 93.6 133 42.9
CSS0049289 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 2.5e-17 93.2 67 67.2
Nitab4.5_0003092g0070 Nicotiana tabacum HOM05D006333 ORTHO05D007799 2.5e-17 93.2 97 51.5
THA.LOC104808350 Tarenaya hassleriana HOM05D006333 ORTHO05D007799 2.5e-17 93.2 133 42.1
AUR62017701 Chenopodium quinoa HOM05D006333 ORTHO05D007799 3.3e-17 92.8 65 69.2
Sabra07G0060700 Salix brachista HOM05D006333 ORTHO05D007799 3.3e-17 92.8 133 42.1
HanXRQChr12g0366301 Helianthus annuus HOM05D006333 ORTHO05D007799 4.3e-17 92.4 67 67.2
Thhalv10008690m.g Eutrema salsugineum HOM05D006333 ORTHO05D007799 5.7e-17 92.0 67 67.2
DCAR_008496 Daucus carota HOM05D003141 ORTHO05D003633 9.6e-17 91.3 97 53.6
AUR62032988 Chenopodium quinoa HOM05D006333 ORTHO05D007799 1.3e-16 90.9 65 69.2
Lj3A849G43 Lonicera japonica HOM05D006333 ORTHO05D007799 1.3e-16 90.9 97 51.5
Ah.01g001500 Amaranthus hybridus HOM05D006333 ORTHO05D007799 1.6e-16 90.5 66 66.7
EL10Ac9g22952 Beta vulgaris HOM05D006333 ORTHO05D007799 1.6e-16 90.5 97 49.5
Rhsim09G0071800 Rhododendron simsii HOM05D006333 ORTHO05D007799 1.6e-16 90.5 67 64.2
Sopen02g004090 Solanum pennellii HOM05D006333 ORTHO05D007799 1.6e-16 90.5 67 65.7
Solyc02g014720.4 Solanum lycopersicum HOM05D006333 ORTHO05D007799 2.1e-16 90.1 67 65.7
Nitab4.5_0008825g0020 Nicotiana tabacum HOM05D006333 ORTHO05D007799 3.7e-16 89.4 66 65.2
Sc17g0000100 Simmondsia chinensis HOM05D006333 ORTHO05D007799 3.7e-16 89.4 66 68.2
SGA_v2.0_scaffold146G36264 Striga asiatica HOM05D006333 ORTHO05D007799 4.8e-16 89.0 67 65.7
Cc11_g02420 Coffea canephora HOM05D006333 ORTHO05D007799 6.2e-16 88.6 68 69.1
Migut.A00709 Erythranthe guttata HOM05D006333 ORTHO05D007799 1.1e-15 87.8 67 62.7
Cpa.g.sc0.135 Carica papaya HOM05D006333 ORTHO05D007799 1.4e-15 87.4 138 39.1
Nn5g28807 Nelumbo nucifera HOM05D006333 ORTHO05D007799 1.4e-15 87.4 67 61.2
CAN.G1011.5 Capsicum annuum HOM05D006333 ORTHO05D007799 9.0e-15 84.7 67 58.2
MBI06_g42293_MAGBIO Magnolia biondii HOM05D006333 ORTHO05D007799 9.0e-15 84.7 99 52.5
SGA_v2.0_scaffold173G39125 Striga asiatica HOM05D006333 ORTHO05D007799 9.0e-15 84.7 66 62.1
MSTRG.11948 Avicennia marina HOM05D006333 ORTHO05D007799 1.2e-14 84.3 67 59.7
Peaxi162Scf00334g00421 Petunia axillaris HOM05D006333 ORTHO05D007799 1.2e-14 84.3 67 59.7
ATR0618G379 Amborella trichopoda HOM05D006333 ORTHO05D007799 4.5e-14 82.4 67 56.7
Lsat_1_v5_gn_8_33120 Lactuca sativa HOM05D006333 ORTHO05D007799 1.3e-13 80.9 100 49.0
unitig_32.g11605 Utricularia gibba HOM05D006333 ORTHO05D007799 1.3e-13 80.9 67 59.7
Aqoxy3G04253 Aquilegia oxysepala HOM05D006333 ORTHO05D007799 1.7e-13 80.5 98 46.9
Actinidia11766 Actinidia chinensis HOM05D006333 ORTHO05D007799 5.0e-13 79.0 64 64.1
HPP92_008575 Vanilla planifolia HOM05D006333 ORTHO05D007799 1.0e-10 71.2 59 62.7
PSO063G3232 Papaver somniferum HOM05D006333 ORTHO05D007799 6.7e-10 68.6 135 34.1
SalBow7G0482 Salvia bowleyana HOM05D006333 ORTHO05D007799 5.7e-09 65.5 65 53.8
CSS0015547 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 2.2e-08 63.5 70 52.9
Os10g0486000 Oryza sativa ssp. japonica HOM05D006333 ORTHO05D007799 6.3e-08 62.0 67 52.2
SMO116G0442 Selaginella moellendorffii HOM05D006333 ORTHO05D007799 1.1e-07 61.2 65 50.8
Mapoly0006s0058 Marchantia polymorpha HOM05D006333 ORTHO05D007799 3.1e-07 59.7 66 48.5
Haze_11767 Corylus avellana HOM05D006333 ORTHO05D007799 5.3e-07 58.9 38 73.7
Zm00001eb045350 Zea mays HOM05D006333 ORTHO05D007799 5.3e-07 58.9 55 56.4
Pp3c7_23360 Physcomitrium patens HOM05D006333 ORTHO05D007799 3.4e-06 56.2 58 44.8
Actinidia13050 Actinidia chinensis HOM05D006333 ORTHO05D007799 1.0e-05 54.7 37 67.6


User provided reference genes

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