Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p039135 Quercus lobata HOM05D007520 ORTHO05D009417 5.6e-147 524.2 263 100.0
Hma1.2p1_0095F.1_g047520 Hydrangea macrophylla HOM05D007520 ORTHO05D009417 5.9e-72 275.0 199 72.4
COL.COLO4_27582 Corchorus olitorius HOM05D007520 ORTHO05D009417 1.3e-71 273.9 200 68.5
Actinidia11793 Actinidia chinensis HOM05D007520 ORTHO05D009417 6.5e-71 271.6 206 69.4
Ciclev10016556m.g Citrus clementina HOM05D007520 ORTHO05D009417 8.6e-71 271.2 211 66.4
TAR374G0082 Trochodendron aralioides HOM05D000504 ORTHO05D000403 5.5e-70 268.5 199 68.3
TWI53G0076 Tripterygium wilfordii HOM05D007520 ORTHO05D009417 1.4e-68 263.8 205 68.8
CiPaw.06G058600 Carya illinoinensis HOM05D007520 ORTHO05D009417 4.0e-68 262.3 199 71.4
ECA246G0416 Erigeron canadensis HOM05D007520 ORTHO05D009417 4.0e-68 262.3 192 69.3
CANSAT78G2519 Cannabis sativa HOM05D007520 ORTHO05D009417 5.2e-68 261.9 209 66.0
Manes.17G089333 Manihot esculenta HOM05D007520 ORTHO05D009417 4.9e-66 255.4 201 69.2
Gorai.008G169800 Gossypium raimondii HOM05D007520 ORTHO05D009417 8.3e-66 254.6 205 62.4
Prupe.1G338000 Prunus persica HOM05D007520 ORTHO05D009417 8.3e-66 254.6 201 65.2
Sed0012329 Sechium edule HOM05D007520 ORTHO05D009417 1.1e-65 254.2 207 64.3
Thhalv10005705m.g Eutrema salsugineum HOM05D007520 ORTHO05D009417 1.4e-65 253.8 199 67.8
TPR.G35527 Trifolium pratense HOM05D007520 ORTHO05D009417 1.4e-65 253.8 198 65.2
MELO3C020056.2 Cucumis melo HOM05D007520 ORTHO05D009417 2.4e-65 253.1 207 63.3
Duzib268G1867 Durio zibethinus HOM05D007520 ORTHO05D009417 5.4e-65 251.9 199 62.8
THA.LOC104824117 Tarenaya hassleriana HOM05D007520 ORTHO05D009417 7.0e-65 251.5 199 64.8
BcaC06g31264 Brassica carinata HOM05D007520 ORTHO05D009417 9.2e-65 251.1 196 65.3
MD13G1015700 Malus domestica HOM05D007520 ORTHO05D009417 9.2e-65 251.1 201 66.2
CsaV3_5G012990 Cucumis sativus L. HOM05D007520 ORTHO05D009417 2.0e-64 250.0 207 61.8
VMungo0251G1805 Vigna mungo HOM05D007520 ORTHO05D009417 4.5e-64 248.8 194 63.4
CARHR144480 Cardamine hirsuta HOM05D007520 ORTHO05D009417 1.3e-63 247.3 199 63.8
Lj2g0009613 Lotus japonicus HOM05D007520 ORTHO05D009417 1.3e-63 247.3 198 63.1
Nn4g24547 Nelumbo nucifera HOM05D007520 ORTHO05D009417 1.3e-63 247.3 201 63.2
PGR042G3173 Punica granatum HOM05D007520 ORTHO05D009417 1.3e-63 247.3 212 63.7
Medtr1g038820 Medicago truncatula HOM05D007520 ORTHO05D009417 1.7e-63 246.9 206 62.1
Sp2g13330 Schrenkiella parvula HOM05D007520 ORTHO05D009417 1.7e-63 246.9 199 64.8
BraA06t27270Z Brassica rapa HOM05D007520 ORTHO05D009417 2.9e-63 246.1 200 64.0
C07p32740 Brassica napus HOM05D007520 ORTHO05D009417 3.8e-63 245.7 196 65.3
RcHm_v2.0_Chr4g0433681 Rosa chinensis HOM05D007520 ORTHO05D009417 6.6e-63 245.0 200 64.0
A06p43940 Brassica napus HOM05D007520 ORTHO05D009417 8.6e-63 244.6 196 64.8
BolC7t43791H Brassica oleracea HOM05D007520 ORTHO05D009417 1.1e-62 244.2 200 64.0
Psat6g100600 Pisum sativum HOM05D007520 ORTHO05D009417 1.5e-62 243.8 198 63.1
FvH4_4g26110 Fragaria vesca HOM05D007520 ORTHO05D009417 2.5e-62 243.0 200 62.5
Migut.L00619 Erythranthe guttata HOM05D007520 ORTHO05D009417 4.3e-62 242.3 199 62.8
arahy.Tifrunner.gnm1.ann1.RL07R4 Arachis hypogaea HOM05D007520 ORTHO05D009417 5.6e-62 241.9 203 62.1
Atru.chr11.1007 Acer truncatum HOM05D007520 ORTHO05D009417 1.2e-61 240.7 183 67.8
AT2G01905 Arabidopsis thaliana HOM05D007520 ORTHO05D009417 1.6e-61 240.4 199 63.8
Aqoxy5G01264 Aquilegia oxysepala HOM05D007520 ORTHO05D009417 4.7e-61 238.8 199 59.8
AL5G11020 Arabidopsis lyrata HOM05D007520 ORTHO05D009417 1.4e-60 237.3 199 62.3
Aa31LG2G8010 Aethionema arabicum HOM05D007520 ORTHO05D009417 6.8e-60 235.0 227 58.1
HanXRQChr12g0379401 Helianthus annuus HOM05D007520 ORTHO05D009417 8.9e-60 234.6 180 65.6
SGA_v2.0_scaffold172G39028 Striga asiatica HOM05D007520 ORTHO05D009417 4.4e-59 232.3 198 62.1
Phvul.003G001900 Phaseolus vulgaris HOM05D007520 ORTHO05D009417 4.9e-58 228.8 199 58.3
Nitab4.5_0004339g0060 Nicotiana tabacum HOM05D007520 ORTHO05D009417 1.4e-57 227.3 201 62.2
PSO017G5472 Papaver somniferum HOM05D007520 ORTHO05D009417 3.2e-57 226.1 207 57.5
Nitab4.5_0010118g0020 Nicotiana tabacum HOM05D007520 ORTHO05D009417 7.0e-57 224.9 201 60.7
Sopen04g032100 Solanum pennellii HOM05D007520 ORTHO05D009417 1.6e-56 223.8 200 60.0
PGSC0003DMG400041336 Solanum tuberosum HOM05D001905 ORTHO05D001820 2.0e-56 223.4 200 60.5
Solyc04g078500.1 Solanum lycopersicum HOM05D007520 ORTHO05D009417 4.6e-56 222.2 196 60.7
CAN.G1812.4 Capsicum annuum HOM05D007520 ORTHO05D009417 3.0e-55 219.5 195 59.5
PSO478G1043 Papaver somniferum HOM05D007520 ORTHO05D009417 3.9e-55 219.2 212 55.7
Zm00001eb010100 Zea mays HOM05D007520 ORTHO05D009417 8.0e-53 211.5 213 49.3
Thecc.02G303900 Theobroma cacao HOM05D007520 ORTHO05D009417 1.5e-51 207.2 144 71.5
Lalb_Chr10g0094861 Lupinus albus HOM05D007520 ORTHO05D009417 2.0e-51 206.8 184 59.2
Sc15g0004470 Simmondsia chinensis HOM05D007520 ORTHO05D009417 5.8e-51 205.3 205 53.2
Lsat_1_v5_gn_5_170921 Lactuca sativa HOM05D007520 ORTHO05D009417 9.8e-51 204.5 217 54.4
FAN12G3032 Fragaria x ananassa HOM05D007520 ORTHO05D009417 4.6e-48 195.7 155 65.2
FAN12G3090 Fragaria x ananassa HOM05D007520 ORTHO05D009417 4.6e-48 195.7 155 65.2
FAN17G2852 Fragaria x ananassa HOM05D007520 ORTHO05D009417 5.0e-47 192.2 171 59.6
EL10Ac1g01972 Beta vulgaris HOM05D007520 ORTHO05D009417 7.3e-46 188.3 202 53.0
Atru.BG.295.p Acer truncatum HOM05D007520 ORTHO05D009417 1.6e-45 187.2 130 73.1
Ah.11g041100 Amaranthus hybridus HOM05D007520 ORTHO05D009417 2.1e-45 186.8 202 50.5
Dinv08902 Davidia involucrata HOM05D007520 ORTHO05D009417 1.4e-44 184.1 139 70.5
FAN22G1570 Fragaria x ananassa HOM05D000296 ORTHO05D000175 1.0e-39 167.9 155 56.1
Rhsim09G0085600 Rhododendron simsii HOM05D007520 ORTHO05D009417 4.3e-38 162.5 156 57.7
Glyma.14G224300 Glycine max HOM05D007520 ORTHO05D009417 4.7e-37 159.1 128 61.7
Hma1.2p1_0095F.1_g047530 Hydrangea macrophylla HOM05D007520 ORTHO05D009417 9.9e-35 151.4 227 43.6
CSS0024703 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 4.1e-33 146.0 129 57.4
DCAR_002655 Daucus carota HOM05D007520 ORTHO05D009417 4.1e-33 146.0 130 60.0
Gohir.D12G157000 Gossypium hirsutum HOM05D007520 ORTHO05D009417 5.4e-33 145.6 199 44.2
GSVIVG01011596001 Vitis vinifera HOM05D007520 ORTHO05D009417 7.1e-33 145.2 108 71.3
Gohir.A12G153900 Gossypium hirsutum HOM05D007520 ORTHO05D009417 2.1e-32 143.7 197 44.2
AUR62036879 Chenopodium quinoa HOM05D007520 ORTHO05D009417 4.6e-32 142.5 141 53.2
GSVIVG01011595001 Vitis vinifera HOM05D007520 ORTHO05D009417 2.5e-30 136.7 86 76.7
ClCG11G001000 Citrullus lanatus HOM05D007520 ORTHO05D009417 3.3e-30 136.3 128 55.5
Cc11_g05730 Coffea canephora HOM05D007520 ORTHO05D009417 1.2e-29 134.4 103 67.0
MSTRG.8107 Avicennia marina HOM05D007520 ORTHO05D009417 2.1e-29 133.7 107 64.5
CSS0003025 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 2.8e-29 133.3 129 53.5
Lj3A859T72 Lonicera japonica HOM05D007520 ORTHO05D009417 2.8e-29 133.3 131 57.3
SalBow3G0394 Salvia bowleyana HOM05D007520 ORTHO05D009417 3.6e-29 132.9 114 61.4
SalBow4G2630 Salvia bowleyana HOM05D007520 ORTHO05D009417 3.6e-29 132.9 114 61.4
Carub.0005s0090 Capsella rubella HOM05D007520 ORTHO05D009417 3.1e-28 129.8 86 69.8
CSS0021820 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 4.0e-28 129.4 93 68.8
CSS0032687 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 4.0e-28 129.4 93 68.8
PGSC0003DMG400013121 Solanum tuberosum HOM05D007520 ORTHO05D009417 4.0e-28 129.4 110 62.7
Carub.0005s0089 Capsella rubella HOM05D007520 ORTHO05D009417 2.6e-27 126.7 111 61.3
Haze_10814 Corylus avellana HOM05D007520 ORTHO05D009417 1.7e-23 114.0 74 78.4
HPP92_016407 Vanilla planifolia HOM05D007520 ORTHO05D009417 2.1e-21 107.1 86 57.0
SalBow6G7185 Salvia bowleyana HOM05D007520 ORTHO05D009417 1.1e-20 104.8 95 60.0
Mapoly0059s0009 Marchantia polymorpha HOM05D007520 ORTHO05D009417 5.8e-19 99.0 198 30.3
CSS0008274 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 1.7e-18 97.4 58 77.6
SalBow2G3493 Salvia bowleyana HOM05D007520 ORTHO05D009417 2.9e-18 96.7 88 60.2
HPP92_016406 Vanilla planifolia HOM05D007520 ORTHO05D009417 6.4e-18 95.5 62 74.2
CDE06G1244 Ceratophyllum demersum HOM05D007520 ORTHO05D009417 1.1e-14 84.7 70 51.4
Pp3c10_19450 Physcomitrium patens HOM05D007520 ORTHO05D009417 1.9e-14 84.0 182 28.6
Dinv08901 Davidia involucrata HOM05D007520 ORTHO05D009417 3.3e-14 83.2 45 86.7
AUR62026615 Chenopodium quinoa HOM05D007520 ORTHO05D009417 3.8e-10 69.7 78 44.9
Eucgr.B02652 Eucalyptus grandis HOM05D007520 ORTHO05D009417 8.4e-10 68.6 48 62.5
AUR62032185 Chenopodium quinoa HOM05D007520 ORTHO05D009417 1.6e-08 64.3 66 45.5
AUR62033544 Chenopodium quinoa HOM05D000122 ORTHO05D009417 1.6e-08 64.3 83 37.3


User provided reference genes

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