Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p033900 Quercus lobata HOM05D006947 ORTHO05D008818 0.0e+00 1542.7 869 100.0
Cfa014981 Carpinus fangiana HOM05D006947 ORTHO05D008818 0.0e+00 1174.1 871 73.0
CiPaw.06G048400 Carya illinoinensis HOM05D006947 ORTHO05D008818 0.0e+00 1137.5 870 71.8
Haze_10941 Corylus avellana HOM05D006947 ORTHO05D008818 0.0e+00 1132.5 927 67.9
Dinv28045 Davidia involucrata HOM05D006947 ORTHO05D008818 1.6e-299 1032.7 866 66.5
MD16G1022800 Malus domestica HOM05D006947 ORTHO05D008818 1.0e-298 1030.0 873 65.3
Ciclev10014242m.g Citrus clementina HOM05D006947 ORTHO05D008818 3.2e-292 1008.4 869 64.0
Gorai.002G176700 Gossypium raimondii HOM05D006947 ORTHO05D008818 2.7e-291 1005.4 872 63.1
TAR622G0063 Trochodendron aralioides HOM05D006947 ORTHO05D008818 1.5e-289 999.6 866 64.2
Manes.17G080500 Manihot esculenta HOM05D006947 ORTHO05D008818 2.0e-289 999.2 868 63.1
RcHm_v2.0_Chr4g0443581 Rosa chinensis HOM05D006947 ORTHO05D008818 3.1e-287 991.9 866 63.4
GSVIVG01011706001 Vitis vinifera HOM05D006947 ORTHO05D008818 1.2e-286 989.9 776 68.0
Potri.010G110200 Populus trichocarpa HOM05D006947 ORTHO05D008818 1.0e-285 986.9 847 64.3
TWI74G1199 Tripterygium wilfordii HOM05D006947 ORTHO05D008818 6.5e-285 984.2 848 63.4
Duzib251G0407 Durio zibethinus HOM05D006947 ORTHO05D008818 4.4e-281 971.5 869 62.3
ClCG01G006350 Citrullus lanatus HOM05D006947 ORTHO05D008818 6.3e-280 967.6 871 61.9
COL.COLO4_13100 Corchorus olitorius HOM05D006947 ORTHO05D008818 6.3e-280 967.6 872 62.4
FAN07G0937 Fragaria x ananassa HOM05D006947 ORTHO05D008818 3.1e-279 965.3 874 61.1
Eucgr.B02936 Eucalyptus grandis HOM05D006947 ORTHO05D008818 1.6e-278 963.0 847 62.3
Potri.008G131900 Populus trichocarpa HOM05D006947 ORTHO05D008818 7.7e-278 960.7 847 62.6
MELO3C005295.2 Cucumis melo HOM05D006947 ORTHO05D008818 1.7e-277 959.5 802 65.0
Gohir.D01G143300 Gossypium hirsutum HOM05D006947 ORTHO05D008818 1.1e-276 956.8 748 67.8
CSS0036590 Camellia sinensis var. sinensis HOM05D006947 ORTHO05D008818 7.2e-276 954.1 809 64.5
FAN12G3265 Fragaria x ananassa HOM05D006947 ORTHO05D008818 8.9e-274 947.2 894 59.7
CsaV3_5G028330 Cucumis sativus L. HOM05D006947 ORTHO05D008818 7.0e-271 937.6 802 63.5
Atru.chr11.650 Acer truncatum HOM05D006947 ORTHO05D008818 9.2e-271 937.2 814 63.6
Hma1.2p1_0330F.1_g127400 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 1.6e-270 936.4 774 65.9
Lalb_Chr10g0096001 Lupinus albus HOM05D006947 ORTHO05D008818 2.0e-270 936.0 825 62.4
Sabra10G0080600 Salix brachista HOM05D006947 ORTHO05D008818 4.4e-265 918.3 772 64.4
Gohir.1Z015600 Gossypium hirsutum HOM05D006947 ORTHO05D008818 9.8e-265 917.1 872 60.0
Sed0026926 Sechium edule HOM05D006947 ORTHO05D008818 8.3e-264 914.1 830 60.6
Peaxi162Scf00376g00128 Petunia axillaris HOM05D006947 ORTHO05D008818 4.1e-263 911.8 812 60.8
Nitab4.5_0000282g0010 Nicotiana tabacum HOM05D006947 ORTHO05D008818 1.0e-261 907.1 799 61.6
Cc11_g08260 Coffea canephora HOM05D006947 ORTHO05D008818 5.6e-260 901.4 797 61.0
Glyma.09G120400 Glycine max HOM05D006947 ORTHO05D008818 2.1e-259 899.4 835 59.6
CANSAT01G1138 Cannabis sativa HOM05D006947 ORTHO05D008818 1.9e-255 886.3 856 57.8
FvH4_4g34070 Fragaria vesca HOM05D006947 ORTHO05D008818 1.2e-254 883.6 717 65.7
THA.LOC104822169 Tarenaya hassleriana HOM05D006947 ORTHO05D008818 1.5e-252 876.7 805 60.4
DCAR_026786 Daucus carota HOM05D006947 ORTHO05D008818 6.2e-251 871.3 767 61.9
PGR102G1367 Punica granatum HOM05D006947 ORTHO05D008818 5.2e-250 868.2 877 56.7
Sopen05g023090 Solanum pennellii HOM05D006947 ORTHO05D008818 5.2e-250 868.2 759 61.0
Ca_12591_v3 Cicer arietinum L. HOM05D006947 ORTHO05D008818 2.2e-248 862.8 780 60.9
Phvul.003G022200 Phaseolus vulgaris HOM05D006947 ORTHO05D008818 3.7e-248 862.1 804 59.8
Solyc05g026560.3 Solanum lycopersicum HOM05D006947 ORTHO05D008818 1.4e-247 860.1 759 60.9
Gohir.A01G150136 Gossypium hirsutum HOM05D006947 ORTHO05D008818 1.7e-245 853.2 872 57.2
MSTRG.907 Avicennia marina HOM05D006947 ORTHO05D008818 1.9e-244 849.7 808 59.3
Lj6A742T64 Lonicera japonica HOM05D006947 ORTHO05D008818 1.2e-243 847.0 798 60.4
VMungo1215G1110 Vigna mungo HOM05D006947 ORTHO05D008818 2.1e-243 846.3 794 59.3
Sp1g20640 Schrenkiella parvula HOM05D006947 ORTHO05D008818 6.2e-243 844.7 856 56.9
arahy.Tifrunner.gnm1.ann1.8B134P Arachis hypogaea HOM05D006947 ORTHO05D008818 4.0e-242 842.0 805 58.6
HanXRQChr12g0363561 Helianthus annuus HOM05D006947 ORTHO05D008818 4.0e-242 842.0 835 57.4
EL10Ac6g14173 Beta vulgaris HOM05D006947 ORTHO05D008818 2.0e-241 839.7 864 54.2
AUR62014176 Chenopodium quinoa HOM05D006947 ORTHO05D008818 2.9e-240 835.9 847 53.7
arahy.Tifrunner.gnm1.ann1.573L1D Arachis hypogaea HOM05D006947 ORTHO05D008818 4.2e-239 832.0 753 60.8
BcaB03g11927 Brassica carinata HOM05D006947 ORTHO05D008818 5.4e-239 831.6 828 56.9
Thhalv10006791m.g Eutrema salsugineum HOM05D006947 ORTHO05D008818 6.0e-238 828.2 851 55.1
AUR62039529 Chenopodium quinoa HOM05D006947 ORTHO05D008818 7.8e-238 827.8 842 53.3
CARHR023620 Cardamine hirsuta HOM05D006947 ORTHO05D008818 1.9e-236 823.2 854 55.6
C08p21780 Brassica napus HOM05D006947 ORTHO05D008818 5.6e-236 821.6 851 55.1
BcaC07g39188 Brassica carinata HOM05D006947 ORTHO05D008818 7.3e-236 821.2 852 55.3
BolC8t49817H Brassica oleracea HOM05D006947 ORTHO05D008818 9.6e-236 820.8 852 55.3
AL1G36850 Arabidopsis lyrata HOM05D006947 ORTHO05D008818 1.4e-234 817.0 840 56.3
TPR.G36974 Trifolium pratense HOM05D006947 ORTHO05D008818 1.8e-234 816.6 794 58.2
Sc14g0006260 Simmondsia chinensis HOM05D006947 ORTHO05D008818 5.3e-234 815.1 844 55.0
BraA08t34762Z Brassica rapa HOM05D006947 ORTHO05D008818 2.0e-233 813.1 788 57.6
AT1G23180 Arabidopsis thaliana HOM05D006947 ORTHO05D008818 2.2e-232 809.7 857 54.8
A08p28310 Brassica napus HOM05D006947 ORTHO05D008818 2.2e-232 809.7 845 55.5
Aa31LG7G7190 Aethionema arabicum HOM05D006947 ORTHO05D008818 2.9e-232 809.3 834 55.4
Sc14g0007020 Simmondsia chinensis HOM05D006947 ORTHO05D008818 3.8e-232 808.9 844 54.9
ECA233G0254 Erigeron canadensis HOM05D006947 ORTHO05D008818 1.1e-231 807.4 756 59.0
Migut.L00588 Erythranthe guttata HOM05D006947 ORTHO05D008818 1.4e-231 807.0 817 55.4
Carub.0001s2275 Capsella rubella HOM05D006947 ORTHO05D008818 1.9e-231 806.6 859 55.3
Ah.03g137350 Amaranthus hybridus HOM05D006947 ORTHO05D008818 2.7e-230 802.7 844 53.4
Thecc.02G287500 Theobroma cacao HOM05D006947 ORTHO05D008818 1.2e-225 787.3 705 62.4
Medtr1g031750 Medicago truncatula HOM05D006947 ORTHO05D008818 2.6e-225 786.2 763 57.3
Aqoxy3G04093 Aquilegia oxysepala HOM05D006947 ORTHO05D008818 7.1e-223 778.1 767 57.6
Actinidia36648 Actinidia chinensis HOM05D006947 ORTHO05D008818 1.8e-221 773.5 879 54.0
Rhsim09G0093800 Rhododendron simsii HOM05D006947 ORTHO05D008818 2.8e-219 766.1 900 52.6
Hund24964 Selenicereus undatus HOM05D006947 ORTHO05D008818 3.1e-218 762.7 841 51.7
Lsat_1_v5_gn_8_44260 Lactuca sativa HOM05D006947 ORTHO05D008818 9.0e-218 761.1 849 51.8
ATR0317G087 Amborella trichopoda HOM05D006947 ORTHO05D008818 1.6e-211 740.3 786 53.1
MBI15_g36991_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 3.2e-207 726.1 717 55.6
HPP92_024592 Vanilla planifolia HOM05D006947 ORTHO05D008818 9.7e-196 688.0 812 48.9
unitig_52.g17412 Utricularia gibba HOM05D006947 ORTHO05D008818 5.9e-193 678.7 736 51.5
Prupe.1G330100 Prunus persica HOM05D006947 ORTHO05D008818 2.1e-190 670.2 575 64.9
CDE11G0632 Ceratophyllum demersum HOM05D006947 ORTHO05D008818 2.8e-187 659.8 780 49.4
Os01g0524700 Oryza sativa ssp. japonica HOM05D006947 ORTHO05D008818 2.1e-182 643.7 793 46.0
Lj2g0020590 Lotus japonicus HOM05D006947 ORTHO05D008818 8.8e-173 611.7 596 57.9
Psat6g044440 Pisum sativum HOM05D006947 ORTHO05D008818 9.1e-170 601.7 588 58.2
HPP92_024520 Vanilla planifolia HOM05D006947 ORTHO05D008818 1.2e-169 601.3 804 44.9
Hma1.2p1_0330F.1_g127410 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 6.8e-165 585.5 495 63.2
vmacro10663 Vaccinium macrocarpon HOM05D006947 ORTHO05D008818 8.8e-165 585.1 879 45.4
Migut.O00818 Erythranthe guttata HOM05D006947 ORTHO05D008818 5.0e-160 569.3 586 61.3
SalBow8G5231 Salvia bowleyana HOM05D006947 ORTHO05D008818 5.6e-159 565.8 588 55.4
MBI15_g41220_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 2.3e-157 560.5 713 48.0
Nitab4.5_0000018g0180 Nicotiana tabacum HOM05D006947 ORTHO05D008818 8.3e-155 552.0 514 59.9
Glyma.07G166300 Glycine max HOM05D006947 ORTHO05D008818 1.8e-154 550.8 524 57.1
Cpa.g.sc2.239 Carica papaya HOM05D006947 ORTHO05D008818 4.1e-154 549.7 637 50.5
PSO782G4825 Papaver somniferum HOM05D006947 ORTHO05D008818 1.9e-135 487.6 534 51.3
PSO063G5930 Papaver somniferum HOM05D006947 ORTHO05D008818 4.4e-132 476.5 534 50.9
Oeu023430.2 Olea europaea HOM05D006947 ORTHO05D008818 3.7e-131 473.4 862 38.4
Pp3c18_19500 Physcomitrium patens HOM05D006947 ORTHO05D008818 3.8e-115 420.2 815 38.0
Nn4g24252 Nelumbo nucifera HOM05D006947 ORTHO05D008818 5.6e-111 406.4 850 36.1
Hma1.2p1_0330F.1_g127420 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 1.2e-100 372.1 282 70.6
AagrBONN_evm.TU.Sc2ySwM_117.3643 Anthoceros agrestis HOM05D006947 ORTHO05D008818 6.3e-86 323.2 397 45.1
Cpa.g.sc1084.1 Carica papaya HOM05D006947 ORTHO05D008818 1.5e-84 318.5 291 61.9
Nitab4.5_0000532g0040 Nicotiana tabacum HOM05D006947 ORTHO05D008818 4.2e-82 310.5 242 66.5
MD13G1021800 Malus domestica HOM05D006947 ORTHO05D008818 2.0e-79 301.6 871 31.5
Mapoly0112s0009 Marchantia polymorpha HOM05D006947 ORTHO05D008818 2.0e-76 291.6 622 37.1
PGSC0003DMG400015903 Solanum tuberosum HOM05D006947 ORTHO05D008818 2.3e-72 278.1 204 69.6
SalBow8G4359 Salvia bowleyana HOM05D006947 ORTHO05D008818 2.2e-70 271.6 224 62.5
CBR_g50426 Chara braunii HOM05D006947 ORTHO05D008818 2.2e-59 235.0 872 31.9
Nitab4.5_0000532g0050 Nicotiana tabacum HOM05D006947 ORTHO05D008818 2.1e-49 201.8 267 47.6
GSVIVG01031683001 Vitis vinifera HOM05D006947 ORTHO05D005406 7.3e-26 123.6 137 50.4
Oeu059516.1 Olea europaea HOM05D001630 ORTHO05D002505 1.7e-14 85.9 68 61.8
Psat6g091080 Pisum sativum HOM05D004333 ORTHO05D005363 1.2e-12 79.7 125 41.6
Psat1g011800 Pisum sativum HOM05D006947 ORTHO05D008818 1.7e-11 75.9 112 42.0
Psat4g128000 Pisum sativum HOM05D002621 ORTHO05D004807 5.8e-07 60.8 52 63.5
Psat6g175840 Pisum sativum HOM05D006947 ORTHO05D005363 7.6e-07 60.5 52 63.5


User provided reference genes

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