Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p031977 Quercus lobata HOM05D006391 ORTHO05D007767 5.0e-203 711.1 405 100.0
CiPaw.07G078100 Carya illinoinensis HOM05D006391 ORTHO05D007767 4.4e-159 565.1 406 76.6
Cfa006327 Carpinus fangiana HOM05D006391 ORTHO05D007767 2.8e-153 545.8 410 77.8
Potri.013G044600 Populus trichocarpa HOM05D006391 ORTHO05D007767 8.9e-144 514.2 411 68.4
Haze_04461 Corylus avellana HOM05D006391 ORTHO05D007767 1.3e-142 510.4 523 62.3
CANSAT54G0018 Cannabis sativa HOM05D006391 ORTHO05D007767 1.4e-141 506.9 411 68.9
COL.COLO4_15424 Corchorus olitorius HOM05D006391 ORTHO05D007767 1.9e-141 506.5 409 71.4
Sabra13G0041000 Salix brachista HOM05D006391 ORTHO05D007767 1.9e-141 506.5 412 68.0
Atru.chr2.892 Acer truncatum HOM05D006391 ORTHO05D007767 2.4e-141 506.1 408 72.3
Manes.08G137500 Manihot esculenta HOM05D006391 ORTHO05D007767 2.4e-141 506.1 412 68.2
Thecc.05G276300 Theobroma cacao HOM05D006391 ORTHO05D007767 4.6e-140 501.9 409 71.6
Gohir.A11G251400 Gossypium hirsutum HOM05D006391 ORTHO05D007767 9.6e-138 494.2 411 66.7
Duzib177G0389 Durio zibethinus HOM05D006391 ORTHO05D007767 2.1e-137 493.0 413 69.5
Prupe.6G348300 Prunus persica HOM05D006391 ORTHO05D007767 1.1e-136 490.7 424 64.9
Nn1g02693 Nelumbo nucifera HOM05D006391 ORTHO05D007767 1.8e-136 490.0 407 65.4
GSVIVG01036208001 Vitis vinifera HOM05D006391 ORTHO05D007767 1.8e-136 490.0 407 71.5
Ciclev10020524m.g Citrus clementina HOM05D006391 ORTHO05D007767 2.4e-136 489.6 407 70.5
Gorai.007G280500 Gossypium raimondii HOM05D006391 ORTHO05D007767 4.0e-136 488.8 412 66.0
FAN09G3726 Fragaria x ananassa HOM05D006391 ORTHO05D007767 1.2e-135 487.3 424 66.7
Gohir.D11G261800 Gossypium hirsutum HOM05D006391 ORTHO05D007767 2.6e-135 486.1 412 66.0
Glyma.20G222100 Glycine max HOM05D006391 ORTHO05D007767 3.8e-134 482.3 411 65.0
FAN02G0817 Fragaria x ananassa HOM05D006391 ORTHO05D007767 8.4e-134 481.1 424 66.0
Medtr1g079830 Medicago truncatula HOM05D006391 ORTHO05D007767 8.4e-134 481.1 409 65.8
TAR636G3322 Trochodendron aralioides HOM05D001448 ORTHO05D005781 8.4e-134 481.1 406 69.7
Actinidia06783 Actinidia chinensis HOM05D006391 ORTHO05D007767 1.4e-133 480.3 407 69.0
CsaV3_1G045530 Cucumis sativus L. HOM05D006391 ORTHO05D007767 3.2e-133 479.2 410 66.6
FAN05G1344 Fragaria x ananassa HOM05D006391 ORTHO05D007767 2.7e-132 476.1 424 66.0
FAN05G3173 Fragaria x ananassa HOM05D006391 ORTHO05D007767 2.7e-132 476.1 424 66.0
MD12G1245500 Malus domestica HOM05D006391 ORTHO05D007767 2.7e-132 476.1 422 67.3
Dinv14621 Davidia involucrata HOM05D006391 ORTHO05D007767 3.5e-132 475.7 406 69.7
Eucgr.H04256 Eucalyptus grandis HOM05D006391 ORTHO05D007767 4.6e-132 475.3 420 65.2
TPR.G10279 Trifolium pratense HOM05D006391 ORTHO05D007767 6.0e-132 474.9 410 65.9
Glyma.10G167000 Glycine max HOM05D006391 ORTHO05D007767 1.0e-131 474.2 371 70.1
RcHm_v2.0_Chr3g0450061 Rosa chinensis HOM05D006391 ORTHO05D007767 1.0e-131 474.2 424 65.6
arahy.Tifrunner.gnm1.ann1.DTTE32 Arachis hypogaea HOM05D006391 ORTHO05D007767 3.9e-131 472.2 410 67.3
arahy.Tifrunner.gnm1.ann1.9EWV20 Arachis hypogaea HOM05D006391 ORTHO05D007767 1.1e-130 470.7 410 66.6
Lj5g0002062 Lotus japonicus HOM05D006391 ORTHO05D007767 1.5e-130 470.3 411 64.7
PGR004G0019 Punica granatum HOM05D006391 ORTHO05D007767 9.6e-130 467.6 417 62.4
Ca_10006_v3 Cicer arietinum L. HOM05D006391 ORTHO05D007767 2.1e-129 466.5 409 63.6
Lalb_Chr21g0311261 Lupinus albus HOM05D006391 ORTHO05D007767 3.6e-129 465.7 407 63.6
TWI56G1126 Tripterygium wilfordii HOM05D006391 ORTHO05D007767 8.1e-129 464.5 407 63.1
Lj2A39G66 Lonicera japonica HOM05D006391 ORTHO05D007767 1.2e-127 460.7 362 69.1
Phvul.L001863 Phaseolus vulgaris HOM05D006391 ORTHO05D007767 2.6e-127 459.5 419 61.6
PGSC0003DMG400028690 Solanum tuberosum HOM05D006391 ORTHO05D007767 5.8e-127 458.4 364 68.1
Sopen11g002020 Solanum pennellii HOM05D006391 ORTHO05D007767 1.3e-126 457.2 409 62.6
VMungo0720G1212 Vigna mungo HOM05D006391 ORTHO05D007767 1.3e-126 457.2 434 60.4
Peaxi162Scf00120g00213 Petunia axillaris HOM05D006391 ORTHO05D007767 1.1e-125 454.1 418 61.2
SalBow3G3308 Salvia bowleyana HOM05D006391 ORTHO05D007767 1.4e-125 453.8 411 61.6
Nitab4.5_0000856g0160 Nicotiana tabacum HOM05D006391 ORTHO05D007767 9.3e-125 451.1 358 68.4
Sc09g0004120 Simmondsia chinensis HOM05D006391 ORTHO05D007767 9.3e-125 451.1 415 61.9
ECA233G2464 Erigeron canadensis HOM05D006391 ORTHO05D007767 2.1e-124 449.9 370 67.6
Solyc11g006080.2 Solanum lycopersicum HOM05D006391 ORTHO05D007767 2.1e-124 449.9 369 66.9
Cc02_g09040 Coffea canephora HOM05D006391 ORTHO05D007767 2.7e-124 449.5 415 62.9
Nitab4.5_0004928g0020 Nicotiana tabacum HOM05D006391 ORTHO05D007767 4.6e-124 448.7 417 60.7
vmacro20003 Vaccinium macrocarpon HOM05D006391 ORTHO05D007767 3.9e-123 445.7 424 60.6
MBI17_g17506_MAGBIO Magnolia biondii HOM05D006391 ORTHO05D007767 5.1e-123 445.3 408 64.5
MELO3C024661.2 Cucumis melo HOM05D006391 ORTHO05D007767 8.7e-123 444.5 439 60.4
Migut.F00812 Erythranthe guttata HOM05D006391 ORTHO05D007767 1.1e-122 444.1 357 69.2
FAN14G3605 Fragaria x ananassa HOM05D006391 ORTHO05D007767 9.6e-122 441.0 425 64.9
ClCG06G009350 Citrullus lanatus HOM05D006391 ORTHO05D007767 1.3e-121 440.7 337 70.6
AT3G04560 Arabidopsis thaliana HOM05D006391 ORTHO05D007767 3.7e-121 439.1 433 59.8
CSS0020771 Camellia sinensis var. sinensis HOM05D006391 ORTHO05D007767 1.8e-120 436.8 406 62.6
FvH4_6g02310 Fragaria vesca HOM05D006391 ORTHO05D007767 1.8e-120 436.8 425 64.7
ATR0680G180 Amborella trichopoda HOM05D006391 ORTHO05D007767 2.4e-120 436.4 406 61.1
FAN14G5548 Fragaria x ananassa HOM05D006391 ORTHO05D007767 2.4e-120 436.4 425 64.5
Aqoxy5G00275 Aquilegia oxysepala HOM05D006391 ORTHO05D007767 4.0e-120 435.6 408 62.0
THA.LOC104827288 Tarenaya hassleriana HOM05D006391 ORTHO05D007767 1.5e-119 433.7 430 62.3
AL3G14580 Arabidopsis lyrata HOM05D006391 ORTHO05D007767 2.6e-119 433.0 429 61.3
HanXRQChr08g0225371 Helianthus annuus HOM05D006391 ORTHO05D007767 7.6e-119 431.4 410 64.4
Thhalv10020805m.g Eutrema salsugineum HOM05D006391 ORTHO05D007767 1.7e-118 430.3 431 58.9
PSO832G3851 Papaver somniferum HOM05D006391 ORTHO05D007767 2.9e-118 429.5 406 62.1
Sed0026137 Sechium edule HOM05D006391 ORTHO05D007767 3.8e-118 429.1 411 59.9
DCAR_028379 Daucus carota HOM05D006391 ORTHO05D007767 4.9e-118 428.7 333 68.2
EL10Ac4g09055 Beta vulgaris HOM05D006391 ORTHO05D007767 6.4e-118 428.3 407 60.9
BraA05t23038Z Brassica rapa HOM05D006391 ORTHO05D007767 6.4e-118 428.3 426 58.7
BcaC05g30188 Brassica carinata HOM05D006391 ORTHO05D007767 8.4e-118 427.9 427 57.8
Rhsim05G0175400 Rhododendron simsii HOM05D006391 ORTHO05D007767 8.4e-118 427.9 417 59.2
BolC5t34924H Brassica oleracea HOM05D006391 ORTHO05D007767 1.1e-117 427.6 428 58.6
AUR62004876 Chenopodium quinoa HOM05D006391 ORTHO05D007767 1.9e-117 426.8 417 58.5
CAN.G582.18 Capsicum annuum HOM05D006391 ORTHO05D007767 3.2e-117 426.0 356 65.2
AUR62037609 Chenopodium quinoa HOM05D006391 ORTHO05D007767 4.2e-117 425.6 415 59.5
PSO210G7203 Papaver somniferum HOM05D006391 ORTHO05D007767 1.6e-116 423.7 408 61.0
CARHR078730 Cardamine hirsuta HOM05D006391 ORTHO05D007767 2.1e-116 423.3 435 59.3
Lsat_1_v5_gn_8_2721 Lactuca sativa HOM05D006391 ORTHO05D007767 2.1e-116 423.3 411 63.0
Carub.0003s0371 Capsella rubella HOM05D006391 ORTHO05D007767 3.5e-116 422.5 436 59.6
Aa31LG5G14980 Aethionema arabicum HOM05D006391 ORTHO05D007767 7.9e-116 421.4 338 66.9
Sp3g03400 Schrenkiella parvula HOM05D006391 ORTHO05D007767 3.0e-115 419.5 437 57.9
Sed0020342 Sechium edule HOM05D006391 ORTHO05D007767 2.1e-113 413.3 410 58.3
Sed0023982 Sechium edule HOM05D006391 ORTHO05D007767 2.1e-113 413.3 409 58.4
unitig_32.g11831 Utricularia gibba HOM05D006391 ORTHO05D007767 3.7e-113 412.5 333 65.5
AUR62001083 Chenopodium quinoa HOM05D006391 ORTHO05D007767 1.8e-112 410.2 439 56.0
Hund22148 Selenicereus undatus HOM05D006391 ORTHO05D007767 2.4e-112 409.8 350 64.9
C05p62710 Brassica napus HOM05D006391 ORTHO05D007767 1.2e-108 397.5 426 58.0
BcaC05g29933 Brassica carinata HOM05D006391 ORTHO05D007767 6.0e-108 395.2 426 57.7
A05p42930 Brassica napus HOM05D006391 ORTHO05D007767 3.9e-107 392.5 427 57.6
Os02g0820600 Oryza sativa ssp. japonica HOM05D006391 ORTHO05D007767 3.4e-103 379.4 378 57.7
Ah.04g163310 Amaranthus hybridus HOM05D006391 ORTHO05D007767 1.7e-102 377.1 410 55.6
Zm00001eb259140 Zea mays HOM05D006391 ORTHO05D007767 1.4e-99 367.5 329 61.7
SGA_v2.0_scaffold243G44310 Striga asiatica HOM05D006391 ORTHO05D007767 9.7e-98 361.3 352 56.2
Cpa.g.sc162.14 Carica papaya HOM05D006391 ORTHO05D007767 9.1e-96 354.8 323 64.1
SEGI_17356 Sequoiadendron giganteum HOM05D006391 ORTHO05D007767 4.7e-92 342.4 335 54.6
CDE04G1237 Ceratophyllum demersum HOM05D006391 ORTHO05D007767 5.7e-90 335.5 312 61.5
MD04G1228400 Malus domestica HOM05D006391 ORTHO05D007767 2.2e-89 333.6 266 65.8
Psat6g143040 Pisum sativum HOM05D006391 ORTHO05D007767 8.5e-78 295.0 320 59.7
HPP92_007146 Vanilla planifolia HOM05D006391 ORTHO05D007767 1.0e-75 288.1 266 58.3
Pp3c19_8680 Physcomitrium patens HOM05D006391 ORTHO05D007767 2.0e-74 283.9 332 48.2
QL03p032009 Quercus lobata HOM05D006391 ORTHO05D007767 3.1e-72 276.6 261 70.1
SMO203G0061 Selaginella moellendorffii HOM05D006391 ORTHO05D007767 2.2e-70 270.4 331 47.4
Mapoly0044s0074 Marchantia polymorpha HOM05D006391 ORTHO05D007767 2.5e-69 266.9 420 41.2
Oeu034581.1 Olea europaea HOM05D006391 ORTHO05D007767 3.4e-66 256.5 211 64.5
HPP92_007142 Vanilla planifolia HOM05D006391 ORTHO05D007767 4.4e-66 256.1 301 50.5
CBR_g8309 Chara braunii HOM05D006391 ORTHO05D007767 1.7e-54 217.6 380 36.6
Oeu058337.1 Olea europaea HOM05D006391 ORTHO05D007767 1.5e-45 188.0 126 75.4
SHI23187 Sapria himalayana HOM05D006391 ORTHO05D007767 2.3e-43 180.6 206 52.4
HPP92_007141 Vanilla planifolia HOM05D006391 ORTHO05D007767 1.7e-33 147.9 87 78.2
Cre02.g105450 Chlamydomonas reinhardtii HOM05D006391 ORTHO05D007767 8.9e-27 125.6 405 26.9
MCO07G609 Micromonas commoda HOM05D006391 ORTHO05D007767 1.0e-22 112.1 323 29.4
BcaB04g19320 Brassica carinata HOM05D006391 ORTHO05D007767 4.0e-19 100.1 68 72.1
MD04G1228300 Malus domestica HOM05D006391 ORTHO05D007767 7.8e-15 85.9 80 63.8
SHI23188 Sapria himalayana HOM05D006391 ORTHO05D007767 9.9e-10 68.9 121 42.1
BcaC02g11594 Brassica carinata HOM05D006391 ORTHO05D007767 1.3e-09 68.6 52 59.6
BolC3t13192H Brassica oleracea HOM05D006391 ORTHO05D007767 3.8e-09 67.0 177 32.2
BolC5t34511H Brassica oleracea HOM05D004842 ORTHO05D005929 3.8e-09 67.0 46 69.6
PRCOL_00004538 Prasinoderma coloniale HOM05D006391 ORTHO05D007767 4.9e-09 66.6 326 23.3
BolC3t17856H Brassica oleracea HOM05D004842 ORTHO05D005929 6.4e-09 66.2 46 67.4


User provided reference genes

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