Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p031869 Quercus lobata HOM05D006219 ORTHO05D007562 5.9e-253 877.1 452 100.0
QL08p015782 Quercus lobata HOM05D006219 ORTHO05D007562 1.2e-250 869.4 452 99.3
CiPaw.07G078300 Carya illinoinensis HOM05D006219 ORTHO05D007562 1.5e-187 659.8 456 76.3
Haze_04459 Corylus avellana HOM05D006219 ORTHO05D007562 4.1e-182 641.7 456 74.1
Cfa006329 Carpinus fangiana HOM05D006219 ORTHO05D007562 1.3e-175 620.2 456 71.9
Cpa.g.sc162.24 Carica papaya HOM05D006219 ORTHO05D007562 4.3e-171 605.1 457 70.5
Manes.09G149100 Manihot esculenta HOM05D006219 ORTHO05D007562 2.4e-169 599.4 466 68.9
Prupe.6G348600 Prunus persica HOM05D006219 ORTHO05D007562 3.4e-168 595.5 471 67.3
Potri.013G044900 Populus trichocarpa HOM05D006219 ORTHO05D007562 4.9e-167 591.7 467 68.3
Atru.chr2.897 Acer truncatum HOM05D006219 ORTHO05D007562 1.4e-166 590.1 456 70.2
TWI36G0216 Tripterygium wilfordii HOM05D006219 ORTHO05D007562 6.2e-162 574.7 436 69.5
FAN05G4153 Fragaria x ananassa HOM05D006219 ORTHO05D007562 8.1e-162 574.3 458 65.9
Sabra13G0041300 Salix brachista HOM05D006219 ORTHO05D007562 2.4e-161 572.8 466 66.7
FAN02G1274 Fragaria x ananassa HOM05D006219 ORTHO05D007562 5.3e-161 571.6 458 65.7
Thecc.05G275300 Theobroma cacao HOM05D006219 ORTHO05D007562 5.3e-161 571.6 457 68.5
FvH4_6g02280 Fragaria vesca HOM05D006219 ORTHO05D007562 2.6e-160 569.3 461 65.5
MD12G1245900 Malus domestica HOM05D006219 ORTHO05D007562 2.6e-160 569.3 466 66.7
FAN05G2712 Fragaria x ananassa HOM05D006219 ORTHO05D007562 2.2e-159 566.2 458 65.1
CSS0036761 Camellia sinensis var. sinensis HOM05D006219 ORTHO05D007562 3.8e-159 565.5 392 74.0
Duzib128G1627 Durio zibethinus HOM05D006219 ORTHO05D007562 3.8e-159 565.5 450 67.6
CANSAT54G2996 Cannabis sativa HOM05D006219 ORTHO05D007562 1.1e-158 563.9 461 65.1
Lj2C39T18 Lonicera japonica HOM05D006219 ORTHO05D007562 1.2e-157 560.5 450 66.2
TAR633G0272 Trochodendron aralioides HOM05D006219 ORTHO05D007562 1.6e-157 560.1 460 64.8
Phvul.L001763 Phaseolus vulgaris HOM05D006219 ORTHO05D007562 1.8e-156 556.6 458 66.4
Glyma.10G166900 Glycine max HOM05D006219 ORTHO05D007562 2.3e-156 556.2 458 67.5
PGR004G0430 Punica granatum HOM05D006219 ORTHO05D007562 8.7e-156 554.3 448 67.4
VMungo0720G3050 Vigna mungo HOM05D006219 ORTHO05D007562 4.3e-155 552.0 461 64.9
Gohir.D13G107000 Gossypium hirsutum HOM05D006219 ORTHO05D007562 2.1e-154 549.7 454 65.6
Gorai.013G120100 Gossypium raimondii HOM05D006219 ORTHO05D007562 4.8e-154 548.5 458 65.7
FAN09G4845 Fragaria x ananassa HOM05D006219 ORTHO05D007562 2.6e-152 542.7 387 70.0
Dinv06988 Davidia involucrata HOM05D006219 ORTHO05D007562 2.2e-151 539.7 443 68.4
Lalb_Chr06g0168341 Lupinus albus HOM05D006219 ORTHO05D007562 2.2e-151 539.7 422 66.8
Gohir.A13G103800 Gossypium hirsutum HOM05D006219 ORTHO05D007562 6.4e-151 538.1 454 64.3
CsaV3_1G045560 Cucumis sativus L. HOM05D006219 ORTHO05D007562 1.6e-149 533.5 420 65.5
Ca_10007_v3 Cicer arietinum L. HOM05D006219 ORTHO05D007562 6.0e-149 531.6 455 62.2
Lj5g0004576 Lotus japonicus HOM05D006219 ORTHO05D007562 1.8e-148 530.0 437 63.8
ClCG06G009410 Citrullus lanatus HOM05D006219 ORTHO05D007562 1.1e-147 527.3 445 63.8
MELO3C024664.2 Cucumis melo HOM05D006219 ORTHO05D007562 7.4e-147 524.6 422 65.2
Sc06g0004060 Simmondsia chinensis HOM05D006219 ORTHO05D007562 1.6e-146 523.5 428 64.3
Sed0012882 Sechium edule HOM05D006219 ORTHO05D007562 9.0e-145 517.7 425 64.0
Aqoxy5G00261 Aquilegia oxysepala HOM05D006219 ORTHO05D007562 1.3e-143 513.8 460 59.8
Lsat_1_v5_gn_2_107721 Lactuca sativa HOM05D006219 ORTHO05D007562 3.8e-143 512.3 464 61.9
Medtr1g079870 Medicago truncatula HOM05D006219 ORTHO05D007562 3.1e-137 492.7 457 61.5
Actinidia06785 Actinidia chinensis HOM05D006219 ORTHO05D007562 1.3e-135 487.3 463 61.6
PSO832G3978 Papaver somniferum HOM05D006219 ORTHO05D007562 1.7e-135 486.9 459 57.1
Rhsim05G0175300 Rhododendron simsii HOM05D006219 ORTHO05D007562 1.7e-135 486.9 376 66.0
PSO210G1007 Papaver somniferum HOM05D006219 ORTHO05D007562 2.2e-135 486.5 459 57.1
THA.LOC104799246 Tarenaya hassleriana HOM05D006219 ORTHO05D007562 1.9e-134 483.4 465 58.3
FAN14G1966 Fragaria x ananassa HOM05D006219 ORTHO05D007562 9.4e-134 481.1 461 58.6
FAN14G5007 Fragaria x ananassa HOM05D006219 ORTHO05D007562 2.1e-133 479.9 461 58.6
RcHm_v2.0_Chr3g0450031 Rosa chinensis HOM05D006219 ORTHO05D007562 7.9e-133 478.0 328 73.2
DCAR_030973 Daucus carota HOM05D006219 ORTHO05D007562 1.4e-132 477.2 454 57.9
AL6G40560 Arabidopsis lyrata HOM05D006219 ORTHO05D007562 1.5e-131 473.8 456 58.1
ECA238G2300 Erigeron canadensis HOM05D006219 ORTHO05D007562 1.5e-131 473.8 460 56.7
Oeu029038.1 Olea europaea HOM05D006219 ORTHO05D007562 1.3e-130 470.7 449 60.4
PGSC0003DMG400028668 Solanum tuberosum HOM05D006219 ORTHO05D007562 1.3e-130 470.7 458 58.1
DCAR_002178 Daucus carota HOM05D006219 ORTHO05D007562 3.7e-130 469.2 385 63.9
Aa31LG5G14970 Aethionema arabicum HOM05D006219 ORTHO05D007562 2.4e-129 466.5 454 56.4
Sopen11g002000 Solanum pennellii HOM05D006219 ORTHO05D007562 3.1e-129 466.1 463 57.0
CARHR185150 Cardamine hirsuta HOM05D006219 ORTHO05D007562 6.9e-129 464.9 456 58.8
HanXRQChr14g0458931 Helianthus annuus HOM05D006219 ORTHO05D007562 6.9e-129 464.9 476 55.5
Peaxi162Scf00120g00021 Petunia axillaris HOM05D006219 ORTHO05D007562 1.2e-128 464.2 461 57.9
Aa31LG11G8710 Aethionema arabicum HOM05D006219 ORTHO05D007562 2.6e-128 463.0 454 56.2
Thhalv10020727m.g Eutrema salsugineum HOM05D006219 ORTHO05D007562 3.4e-128 462.6 468 55.3
A06p37950 Brassica napus HOM05D006219 ORTHO05D007562 5.9e-128 461.8 458 56.8
C07p40330 Brassica napus HOM05D006219 ORTHO05D007562 7.7e-128 461.5 458 57.0
AUR62037607 Chenopodium quinoa HOM05D006219 ORTHO05D007562 1.7e-127 460.3 417 58.3
BcaNung02093 Brassica carinata HOM05D006219 ORTHO05D007562 3.8e-127 459.1 457 56.7
BolC7t44567H Brassica oleracea HOM05D006219 ORTHO05D007562 3.8e-127 459.1 457 56.7
BraA06t26711Z Brassica rapa HOM05D006219 ORTHO05D007562 3.8e-127 459.1 458 56.3
Sp2g20170 Schrenkiella parvula HOM05D006219 ORTHO05D007562 3.8e-127 459.1 458 56.8
HanXRQChr07g0201901 Helianthus annuus HOM05D006219 ORTHO05D007562 5.0e-127 458.8 393 60.3
Solyc11g006060.2 Solanum lycopersicum HOM05D006219 ORTHO05D007562 8.5e-127 458.0 452 57.7
Thhalv10004236m.g Eutrema salsugineum HOM05D006219 ORTHO05D007562 1.4e-126 457.2 457 56.7
CARHR078740 Cardamine hirsuta HOM05D006219 ORTHO05D007562 1.9e-126 456.8 393 61.6
BcaNung01728 Brassica carinata HOM05D006219 ORTHO05D007562 2.5e-126 456.4 456 57.2
CAN.G582.15 Capsicum annuum HOM05D006219 ORTHO05D007562 2.5e-126 456.4 461 56.2
AT3G04550 Arabidopsis thaliana HOM05D006219 ORTHO05D007562 7.2e-126 454.9 448 56.7
BolC1t05743H Brassica oleracea HOM05D006219 ORTHO05D007562 2.7e-125 453.0 472 54.7
Sp3g03390 Schrenkiella parvula HOM05D006219 ORTHO05D007562 7.9e-125 451.4 460 54.8
BcaC09g47795 Brassica carinata HOM05D006219 ORTHO05D007562 1.8e-124 450.3 472 54.7
AT5G28500 Arabidopsis thaliana HOM05D006219 ORTHO05D007562 3.0e-124 449.5 456 56.6
BcaB04g21366 Brassica carinata HOM05D006219 ORTHO05D007562 3.0e-124 449.5 460 56.3
BraA01t04521Z Brassica rapa HOM05D006219 ORTHO05D007562 7.4e-123 444.9 461 55.3
Nitab4.5_0000856g0150 Nicotiana tabacum HOM05D006219 ORTHO05D007562 7.4e-123 444.9 459 55.3
A01p40850 Brassica napus HOM05D006219 ORTHO05D007562 3.7e-122 442.6 457 54.9
BNapus_Darmor_BZH_scaffold_78p00860 Brassica napus HOM05D006219 ORTHO05D007562 3.7e-122 442.6 457 54.9
Carub.0006s2578 Capsella rubella HOM05D006219 ORTHO05D007562 3.7e-122 442.6 417 58.5
Nitab4.5_0010345g0010 Nicotiana tabacum HOM05D006219 ORTHO05D007562 8.2e-122 441.4 459 54.9
Carub.0003s0370 Capsella rubella HOM05D006219 ORTHO05D007562 2.4e-121 439.9 445 55.1
Psat6g143080 Pisum sativum HOM05D006219 ORTHO05D007562 4.1e-121 439.1 343 65.0
AL3G14570 Arabidopsis lyrata HOM05D006219 ORTHO05D007562 7.0e-121 438.3 396 59.6
SalBow3G3408 Salvia bowleyana HOM05D006219 ORTHO05D007562 2.6e-120 436.4 469 54.4
Ah.06g191950 Amaranthus hybridus HOM05D006219 ORTHO05D007562 2.2e-119 433.3 449 52.1
EL10Ac4g09057 Beta vulgaris HOM05D006219 ORTHO05D007562 3.2e-118 429.5 377 59.9
CDE05G0955 Ceratophyllum demersum HOM05D006219 ORTHO05D007562 8.0e-117 424.9 392 58.7
unitig_748.g8683 Utricularia gibba HOM05D006219 ORTHO05D007562 5.2e-116 422.2 436 55.7
Migut.F00810 Erythranthe guttata HOM05D006219 ORTHO05D007562 1.4e-113 414.1 459 52.9
AUR62004874 Chenopodium quinoa HOM05D006219 ORTHO05D007562 2.6e-112 409.8 344 60.2
vmacro20002 Vaccinium macrocarpon HOM05D006219 ORTHO05D007562 9.4e-110 401.4 346 62.4
HPP92_025973 Vanilla planifolia HOM05D006219 ORTHO05D007562 9.1e-105 384.8 392 54.8
CDE08G1514 Ceratophyllum demersum HOM05D006219 ORTHO05D007562 1.2e-104 384.4 366 56.3
TPR.G10266 Trifolium pratense HOM05D006219 ORTHO05D007562 5.9e-104 382.1 442 52.7
Nn1g02711 Nelumbo nucifera HOM05D006219 ORTHO05D007562 2.1e-101 373.6 309 67.3
Hma1.2p1_1227F.1_g268570 Hydrangea macrophylla HOM05D006219 ORTHO05D007562 2.2e-98 363.6 337 61.4
Glyma.20G222200 Glycine max HOM05D006219 ORTHO05D007562 1.9e-94 350.5 253 72.3
ATR0680G103 Amborella trichopoda HOM05D006219 ORTHO05D007562 1.2e-93 347.8 393 49.9
Os10g0445600 Oryza sativa ssp. japonica HOM05D006219 ORTHO05D007562 1.7e-90 337.4 412 47.3
SGA_v2.0_scaffold210G42065 Striga asiatica HOM05D006219 ORTHO05D007562 3.8e-87 326.2 370 54.6
MD04G1228600 Malus domestica HOM05D006219 ORTHO05D007562 4.3e-86 322.8 226 71.2
MBI18_g37358_MAGBIO Magnolia biondii HOM05D006219 ORTHO05D007562 6.8e-84 315.5 367 51.8
Zm00001eb066000 Zea mays HOM05D006219 ORTHO05D007562 5.0e-79 299.3 413 43.1
MBI18_g32212_MAGBIO Magnolia biondii HOM05D006219 ORTHO05D007562 2.9e-74 283.5 462 44.4
SEGI_10874 Sequoiadendron giganteum HOM05D006219 ORTHO05D007562 1.2e-72 278.1 390 45.4
Eucgr.H04253 Eucalyptus grandis HOM05D006219 ORTHO05D007562 3.6e-69 266.5 306 54.2
Ciclev10027647m.g Citrus clementina HOM05D006219 ORTHO05D007562 1.6e-64 251.1 232 62.5
Lalb_Chr18g0044051 Lupinus albus HOM05D006219 ORTHO05D007562 2.1e-61 240.7 266 50.8
Pp3c18_4320 Physcomitrium patens HOM05D006219 ORTHO05D007562 1.2e-56 224.9 393 37.4
Mapoly0001s0431 Marchantia polymorpha HOM05D006219 ORTHO05D007562 1.5e-54 218.0 390 37.7
AagrBONN_evm.TU.Sc2ySwM_117.503 Anthoceros agrestis HOM05D006219 ORTHO05D007562 1.1e-52 211.8 400 38.2
CBR_g29314 Chara braunii HOM05D006219 ORTHO05D007562 4.0e-52 209.9 402 37.3
Cpa.g.sc162.21 Carica papaya HOM05D000369 ORTHO05D007562 8.2e-29 132.5 106 64.2
Cre06.g308450 Chlamydomonas reinhardtii HOM05D006219 ORTHO05D007562 2.0e-27 127.9 406 29.1
AagrBONN_evm.TU.Sc2ySwM_228.3126 Anthoceros agrestis HOM05D006219 ORTHO05D007562 3.1e-20 104.0 202 36.6
Glyma.15G246700 Glycine max HOM05D001461 ORTHO05D005534 1.2e-19 102.1 78 66.7
SMO137G0122 Selaginella moellendorffii HOM05D006219 ORTHO05D007562 6.5e-18 96.3 165 38.2
Pp3c16_6440 Physcomitrium patens HOM05D006219 ORTHO05D007562 1.1e-17 95.5 196 34.2
MCO04G553 Micromonas commoda HOM05D006219 ORTHO05D007562 3.6e-16 90.5 407 26.8
PRCOL_00003529 Prasinoderma coloniale HOM05D006219 ORTHO05D007562 2.3e-15 87.8 386 24.9
Mapoly4350s0001 Marchantia polymorpha HOM05D006219 ORTHO05D007562 2.2e-13 81.3 147 36.7
TAR362G0073 Trochodendron aralioides HOM05D001652 ORTHO05D001768 1.1e-12 79.0 78 55.1


User provided reference genes

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