Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p030456 Quercus lobata HOM05D007620 ORTHO05D009568 4.5e-96 356.3 171 100.0
Haze_04424 Corylus avellana HOM05D007620 ORTHO05D009568 6.5e-71 272.7 171 77.8
Hma1.2p1_1512F.1_g287900 Hydrangea macrophylla HOM05D007620 ORTHO05D009568 2.3e-60 237.7 170 70.0
Cfa006355 Carpinus fangiana HOM05D007620 ORTHO05D009568 1.2e-59 235.3 171 69.6
Thecc.05G270800 Theobroma cacao HOM05D007620 ORTHO05D009568 1.0e-55 222.2 173 65.3
FAN14G2205 Fragaria x ananassa HOM05D004964 ORTHO05D005918 1.2e-53 215.3 173 63.6
TAR362G1297 Trochodendron aralioides HOM05D007620 ORTHO05D009568 3.6e-53 213.8 169 63.9
Gohir.D11G257601 Gossypium hirsutum HOM05D007620 ORTHO05D009568 6.1e-53 213.0 169 63.9
Gorai.007G275900 Gossypium raimondii HOM05D007620 ORTHO05D009568 6.1e-53 213.0 169 63.9
Duzib177G1032 Durio zibethinus HOM05D007620 ORTHO05D009568 1.4e-52 211.8 168 61.9
PSO210G6557 Papaver somniferum HOM05D007620 ORTHO05D009568 2.3e-52 211.1 173 61.8
CSS0021218 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 5.7e-51 206.5 174 63.2
CSS0034254 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 5.7e-51 206.5 174 63.2
Dinv24674 Davidia involucrata HOM05D007620 ORTHO05D009568 9.8e-51 205.7 164 65.2
CSS0013452 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 2.2e-50 204.5 174 62.1
Atru.chr2.986 Acer truncatum HOM05D007620 ORTHO05D009568 3.7e-50 203.8 176 59.7
Nn1g02811 Nelumbo nucifera HOM05D007620 ORTHO05D009568 4.9e-50 203.4 172 61.6
GSVIVG01023503001 Vitis vinifera HOM05D007620 ORTHO05D009568 1.1e-49 202.2 171 62.0
Lsat_1_v5_gn_8_24880 Lactuca sativa HOM05D007620 ORTHO05D009568 3.0e-47 194.1 168 56.5
MD04G1230300 Malus domestica HOM05D007620 ORTHO05D009568 7.3e-46 189.5 152 62.5
Lj2C43T7 Lonicera japonica HOM05D007620 ORTHO05D009568 2.1e-45 188.0 172 57.0
CsaV3_1G045110 Cucumis sativus L. HOM05D007620 ORTHO05D009568 8.0e-45 186.0 167 57.5
MELO3C010128.2 Cucumis melo HOM05D007620 ORTHO05D009568 1.8e-44 184.9 168 57.1
Cc02_g08810 Coffea canephora HOM05D007620 ORTHO05D009568 2.3e-44 184.5 169 56.2
ClCG03G009720 Citrullus lanatus HOM05D007620 ORTHO05D009568 3.1e-44 184.1 168 58.3
Oeu026591.1 Olea europaea HOM05D007620 ORTHO05D009568 2.6e-43 181.0 167 55.1
FAN05G4025 Fragaria x ananassa HOM05D004964 ORTHO05D005918 7.5e-43 179.5 173 56.1
FAN05G4826 Fragaria x ananassa HOM05D004964 ORTHO05D005918 7.5e-43 179.5 173 56.1
FvH4_6g01920 Fragaria vesca HOM05D007620 ORTHO05D009568 2.9e-42 177.6 173 55.5
CSS0031974 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 4.9e-42 176.8 172 55.2
Psat0s1841g0080 Pisum sativum HOM05D007620 ORTHO05D009568 1.4e-41 175.3 176 52.8
Aqoxy5G00210 Aquilegia oxysepala HOM05D007620 ORTHO05D009568 1.9e-41 174.9 173 56.6
CDE04G2606 Ceratophyllum demersum HOM05D007620 ORTHO05D009568 1.9e-41 174.9 172 52.3
FAN02G1272 Fragaria x ananassa HOM05D004964 ORTHO05D005918 1.9e-41 174.9 173 54.9
Sed0010835 Sechium edule HOM05D007620 ORTHO05D009568 9.2e-41 172.6 166 54.2
Ciclev10019446m.g Citrus clementina HOM05D007620 ORTHO05D009568 3.5e-40 170.6 172 57.0
Solyc04g010060.2 Solanum lycopersicum HOM05D007620 ORTHO05D009568 3.5e-40 170.6 162 56.2
THA.LOC104801727 Tarenaya hassleriana HOM05D007620 ORTHO05D009568 7.8e-40 169.5 180 50.6
Sc09g0004220 Simmondsia chinensis HOM05D007620 ORTHO05D009568 1.3e-39 168.7 170 50.0
RcHm_v2.0_Chr3g0449651 Rosa chinensis HOM05D007620 ORTHO05D009568 1.7e-39 168.3 176 52.3
Lj2C43T8 Lonicera japonica HOM05D007620 ORTHO05D009568 3.0e-39 167.5 154 57.1
EL10Ac4g09018 Beta vulgaris HOM05D007620 ORTHO05D009568 3.9e-39 167.2 172 50.0
CANSAT21G0311 Cannabis sativa HOM05D007620 ORTHO05D009568 1.1e-38 165.6 150 53.3
Gohir.A11G247300 Gossypium hirsutum HOM05D007620 ORTHO05D009568 1.5e-38 165.2 97 76.3
C05p62520 Brassica napus HOM05D007620 ORTHO05D009568 1.2e-37 162.2 173 46.8
BolC5t34907H Brassica oleracea HOM05D007620 ORTHO05D009568 1.2e-37 162.2 173 47.4
Phvul.008G151824 Phaseolus vulgaris HOM05D007620 ORTHO05D009568 1.6e-37 161.8 175 48.0
Potri.019G019300 Populus trichocarpa HOM05D007620 ORTHO05D009568 2.1e-37 161.4 174 52.3
A05p42800 Brassica napus HOM05D007620 ORTHO05D009568 3.6e-37 160.6 170 47.1
BraA05t22972Z Brassica rapa HOM05D007620 ORTHO05D009568 3.6e-37 160.6 170 47.1
VMungo0720G2663 Vigna mungo HOM05D007620 ORTHO05D009568 8.1e-37 159.5 175 48.0
Psat6g139880 Pisum sativum HOM05D007620 ORTHO05D009568 1.1e-36 159.1 218 43.1
Glyma.20G222800 Glycine max HOM05D007620 ORTHO05D009568 1.8e-36 158.3 178 46.1
PGR004G2089 Punica granatum HOM05D007620 ORTHO05D009568 1.8e-36 158.3 169 52.1
Migut.F00879 Erythranthe guttata HOM05D007620 ORTHO05D009568 2.3e-36 157.9 182 47.3
Manes.08G053900 Manihot esculenta HOM05D007620 ORTHO05D009568 8.9e-36 156.0 173 51.4
Sabra13G0043000 Salix brachista HOM05D007620 ORTHO05D009568 1.2e-35 155.6 175 54.3
Ca_09448_v3 Cicer arietinum L. HOM05D007620 ORTHO05D009568 2.0e-35 154.8 174 47.1
Glyma.10G166400 Glycine max HOM05D007620 ORTHO05D009568 2.0e-35 154.8 170 48.8
Eucgr.H04228 Eucalyptus grandis HOM05D007620 ORTHO05D009568 4.4e-35 153.7 166 47.6
Lalb_Chr21g0311191 Lupinus albus HOM05D007620 ORTHO05D009568 2.2e-34 151.4 174 47.7
DCAR_023086 Daucus carota HOM05D007620 ORTHO05D009568 3.7e-34 150.6 170 50.0
Lalb_Chr06g0168291 Lupinus albus HOM05D007620 ORTHO05D009568 4.9e-34 150.2 138 57.2
COL.COLO4_15485 Corchorus olitorius HOM05D007620 ORTHO05D009568 8.3e-34 149.4 98 69.4
MD12G1247400 Malus domestica HOM05D007620 ORTHO05D009568 8.3e-34 149.4 152 55.3
Potri.013G047000 Populus trichocarpa HOM05D007620 ORTHO05D009568 8.3e-34 149.4 174 51.7
SGA_v2.0_scaffold13G06478 Striga asiatica HOM05D007620 ORTHO05D009568 1.6e-32 145.2 157 49.0
Peaxi162Scf00528g00227 Petunia axillaris HOM05D007620 ORTHO05D009568 3.0e-31 141.0 167 46.7
ATR0736G141 Amborella trichopoda HOM05D007620 ORTHO05D009568 6.6e-31 139.8 107 59.8
MD12G1247200 Malus domestica HOM05D007620 ORTHO05D009568 1.2e-27 129.0 97 67.0
PGSC0003DMG400011475 Solanum tuberosum HOM05D007620 ORTHO05D009568 1.5e-27 128.6 167 43.1
Sp3g03610 Schrenkiella parvula HOM05D007620 ORTHO05D009568 5.8e-27 126.7 178 40.4
CAN.G358.141 Capsicum annuum HOM05D007620 ORTHO05D009568 3.7e-26 124.0 152 49.3
Aa31LG5G15170 Aethionema arabicum HOM05D007620 ORTHO05D009568 4.9e-26 123.6 182 38.5
Lj1g0023548 Lotus japonicus HOM05D007620 ORTHO05D009568 4.9e-26 123.6 170 41.8
ECA233G5729 Erigeron canadensis HOM05D007620 ORTHO05D009568 4.1e-25 120.6 75 72.0
Lj5g0020911 Lotus japonicus HOM05D007620 ORTHO05D009568 9.2e-25 119.4 73 74.0
AT3G04760 Arabidopsis thaliana HOM05D007620 ORTHO05D009568 1.6e-24 118.6 189 37.6
Medtr1g080110 Medicago truncatula HOM05D007620 ORTHO05D009568 1.6e-24 118.6 144 46.5
TPR.G22332 Trifolium pratense HOM05D007620 ORTHO05D009568 2.7e-24 117.9 176 39.2
AUR62004839 Chenopodium quinoa HOM05D007620 ORTHO05D009568 3.5e-24 117.5 138 45.7
Psat0s1841g0040 Pisum sativum HOM05D007620 ORTHO05D009568 3.5e-24 117.5 217 35.9
Carub.0003s0393 Capsella rubella HOM05D007620 ORTHO05D009568 7.8e-24 116.3 193 37.3
AUR62040929 Chenopodium quinoa HOM05D007620 ORTHO05D009568 7.8e-24 116.3 138 44.9
HPP92_005407 Vanilla planifolia HOM05D007620 ORTHO05D009568 1.3e-23 115.5 133 45.9
SalBow6G2000 Salvia bowleyana HOM05D007620 ORTHO05D009568 1.7e-23 115.2 75 68.0
Ah.06g191910 Amaranthus hybridus HOM05D007620 ORTHO05D009568 3.3e-22 110.9 136 43.4
AL3G14890 Arabidopsis lyrata HOM05D007620 ORTHO05D009568 5.6e-22 110.2 186 37.6
CARHR079010 Cardamine hirsuta HOM05D007620 ORTHO05D009568 4.7e-21 107.1 109 45.9
Glyma.03G251200 Glycine max HOM05D007620 ORTHO05D009568 8.1e-21 106.3 132 48.5
PGR004G1481 Punica granatum HOM05D007620 ORTHO05D009568 9.3e-17 92.8 69 63.8
Prupe.6G350200 Prunus persica HOM05D007620 ORTHO05D009568 6.6e-15 86.7 53 77.4
Nitab4.5_0003780g0130 Nicotiana tabacum HOM05D007620 ORTHO05D009568 2.0e-11 75.1 43 79.1
CDE01G0171 Ceratophyllum demersum HOM05D007620 ORTHO05D009568 2.6e-11 74.7 91 44.0
COL.COLO4_15482 Corchorus olitorius HOM05D007620 ORTHO05D009568 4.4e-11 73.9 50 68.0
Nitab4.5_0006737g0010 Nicotiana tabacum HOM05D007620 ORTHO05D009568 4.4e-11 73.9 43 79.1
Ca_05489_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 7.6e-11 73.2 134 35.8
Ca_29619_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 7.6e-11 73.2 134 35.8
Sopen04g005200 Solanum pennellii HOM05D007620 ORTHO05D009568 1.3e-10 72.4 43 74.4
Hund26855 Selenicereus undatus HOM05D006739 ORTHO05D008402 2.2e-10 71.6 86 46.5
Actinidia10267 Actinidia chinensis HOM05D006739 ORTHO05D008402 5.4e-09 67.0 99 42.4
Thhalv10022408m.g Eutrema salsugineum HOM05D007620 ORTHO05D009568 5.4e-09 67.0 43 65.1
MSTRG.21866 Avicennia marina HOM05D000424 ORTHO05D000355 2.1e-08 65.1 98 31.6
Sc11g0002770 Simmondsia chinensis HOM05D007570 ORTHO05D009365 2.1e-08 65.1 95 38.9
Oeu028579.1 Olea europaea HOM05D000424 ORTHO05D000355 3.9e-07 60.8 98 31.6
arahy.Tifrunner.gnm1.ann1.M3C1JT Arachis hypogaea HOM05D006739 ORTHO05D008402 5.1e-07 60.5 128 35.2
Sopen02g016380 Solanum pennellii HOM05D006569 ORTHO05D007515 1.5e-06 58.9 93 26.9
CDE12G0214 Ceratophyllum demersum HOM05D000891 ORTHO05D000761 1.9e-06 58.5 89 30.3
Glyma.19G248500 Glycine max HOM05D007620 ORTHO05D009568 1.9e-06 58.5 50 56.0
Aqoxy1G00955 Aquilegia oxysepala HOM05D007410 ORTHO05D009500 2.5e-06 58.2 97 34.0
Migut.N00201 Erythranthe guttata HOM05D000424 ORTHO05D000355 2.5e-06 58.2 98 29.6
Eucgr.H03429 Eucalyptus grandis HOM05D000424 ORTHO05D000355 2.5e-06 58.2 98 30.6
Hma1.2p1_1572F.1_g291500 Hydrangea macrophylla HOM05D000424 ORTHO05D000355 2.5e-06 58.2 98 28.6
Aa31LG1G15500 Aethionema arabicum HOM05D000424 ORTHO05D000355 5.6e-06 57.0 98 32.7
AT3G22670 Arabidopsis thaliana HOM05D000424 ORTHO05D000355 7.4e-06 56.6 95 34.7
Gohir.D02G152900 Gossypium hirsutum HOM05D000424 ORTHO05D008586 9.6e-06 56.2 109 26.6
Gorai.005G172000 Gossypium raimondii HOM05D000424 ORTHO05D008586 9.6e-06 56.2 109 26.6
Solyc02g067200.4 Solanum lycopersicum HOM05D006569 ORTHO05D007515 9.6e-06 56.2 93 25.8
GSVIVG01008742001 Vitis vinifera HOM05D000424 ORTHO05D000355 9.6e-06 56.2 109 28.4
Zm00001eb151420 Zea mays HOM05D037632 ORTHO05D009568 9.6e-06 56.2 61 41.0


User provided reference genes

Program Settings