Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p030376 Quercus lobata HOM05D004964 ORTHO05D005918 4.5e-73 277.7 129 100.0
QL03p029942 Quercus lobata HOM05D004964 ORTHO05D005918 2.0e-41 172.6 158 57.6
QL03p030145 Quercus lobata HOM05D004964 ORTHO05D005918 5.9e-41 171.0 158 57.0
QL03p029974 Quercus lobata HOM05D004964 ORTHO05D005918 1.0e-37 160.2 160 53.8
QL03p030425 Quercus lobata HOM05D004964 ORTHO05D005918 3.0e-37 158.7 85 85.9
QL03p030283 Quercus lobata HOM05D004964 ORTHO05D005918 2.6e-36 155.6 85 82.4
Prupe.6G350300 Prunus persica HOM05D004964 ORTHO05D005918 3.0e-29 132.1 160 43.8
CiPaw.07G072600 Carya illinoinensis HOM05D004964 ORTHO05D005918 5.2e-29 131.3 85 70.6
Sabra13G0043100 Salix brachista HOM05D004964 ORTHO05D005918 6.8e-29 131.0 160 44.4
CSS0038343 Camellia sinensis var. sinensis HOM05D004964 ORTHO05D005918 1.2e-28 130.2 150 44.0
Cpa.g.sc162.40 Carica papaya HOM05D004964 ORTHO05D005918 3.4e-28 128.6 164 42.7
Cfa006356 Carpinus fangiana HOM05D004964 ORTHO05D005918 5.7e-28 127.9 97 63.9
FAN05G4025 Fragaria x ananassa HOM05D004964 ORTHO05D005918 1.3e-27 126.7 134 48.5
FAN05G4826 Fragaria x ananassa HOM05D004964 ORTHO05D005918 1.3e-27 126.7 134 48.5
FAN14G5822 Fragaria x ananassa HOM05D004964 ORTHO05D005918 1.7e-27 126.3 134 48.5
Manes.08G139500 Manihot esculenta HOM05D004964 ORTHO05D005918 1.4e-26 123.2 160 43.1
Rhsim09G0136900 Rhododendron simsii HOM05D004964 ORTHO05D005918 1.4e-26 123.2 159 44.0
CSS0014360 Camellia sinensis var. sinensis HOM05D004964 ORTHO05D005918 3.1e-26 122.1 161 40.4
EL10Ac2g04577 Beta vulgaris HOM05D004964 ORTHO05D005918 5.9e-25 117.9 130 44.6
RcHm_v2.0_Chr3g0449661 Rosa chinensis HOM05D004964 ORTHO05D005918 5.9e-25 117.9 160 40.0
AL1G47560 Arabidopsis lyrata HOM05D004964 ORTHO05D005918 1.3e-24 116.7 132 47.7
Peaxi162Scf00407g00626 Petunia axillaris HOM05D004964 ORTHO05D005918 1.3e-24 116.7 159 40.9
FvH4_6g01921 Fragaria vesca HOM05D004964 ORTHO05D005918 1.7e-24 116.3 160 40.6
TAR362G0358 Trochodendron aralioides HOM05D004964 ORTHO05D005918 2.3e-24 115.9 161 41.6
MD04G1230400 Malus domestica HOM05D004964 ORTHO05D005918 8.6e-24 114.0 89 58.4
vmacro10367 Vaccinium macrocarpon HOM05D004964 ORTHO05D005918 1.9e-23 112.8 209 35.4
Sopen01g053470 Solanum pennellii HOM05D004964 ORTHO05D005918 2.5e-23 112.5 159 39.0
GSVIVG01023502001 Vitis vinifera HOM05D004964 ORTHO05D005918 2.5e-23 112.5 85 56.5
CAN.G588.60 Capsicum annuum HOM05D004964 ORTHO05D005918 4.3e-23 111.7 159 38.4
FAN02G1272 Fragaria x ananassa HOM05D004964 ORTHO05D005918 4.3e-23 111.7 160 40.6
Nn4g26424 Nelumbo nucifera HOM05D004964 ORTHO05D005918 2.8e-22 109.0 160 38.1
Solyc01g111410.3 Solanum lycopersicum HOM05D004964 ORTHO05D005918 2.8e-22 109.0 159 37.7
PGSC0003DMG401006195 Solanum tuberosum HOM05D004964 ORTHO05D005918 2.8e-22 109.0 159 38.4
VMungo0331G1958 Vigna mungo HOM05D004964 ORTHO05D005918 4.7e-22 108.2 182 36.3
Nitab4.5_0013387g0040 Nicotiana tabacum HOM05D004964 ORTHO05D005918 8.0e-22 107.5 159 38.4
Carub.0001s0952 Capsella rubella HOM05D004964 ORTHO05D005918 1.8e-21 106.3 159 39.6
AT1G10095 Arabidopsis thaliana HOM05D004964 ORTHO05D005918 2.3e-21 105.9 158 39.2
Sed0000191 Sechium edule HOM05D004964 ORTHO05D005918 3.0e-21 105.5 85 56.5
CARHR222860 Cardamine hirsuta HOM05D004964 ORTHO05D005918 5.2e-21 104.8 153 40.5
CARHR010210 Cardamine hirsuta HOM05D004964 ORTHO05D005918 1.2e-20 103.6 158 39.9
FAN14G2205 Fragaria x ananassa HOM05D004964 ORTHO05D005918 3.4e-20 102.1 85 55.3
BcaC06g34559 Brassica carinata HOM05D004964 ORTHO05D005918 4.4e-20 101.7 158 36.7
C07p27180 Brassica napus HOM05D004964 ORTHO05D005918 4.4e-20 101.7 158 36.7
BolC7t43245H Brassica oleracea HOM05D004964 ORTHO05D005918 4.4e-20 101.7 158 36.7
Duzib106G0302 Durio zibethinus HOM05D004964 ORTHO05D005918 5.7e-20 101.3 85 57.6
Aqoxy4G00649 Aquilegia oxysepala HOM05D004964 ORTHO05D005918 7.5e-20 100.9 149 37.6
Thecc.05G270700 Theobroma cacao HOM05D004964 ORTHO05D005918 7.5e-20 100.9 85 55.3
MSTRG.14348 Avicennia marina HOM05D004964 ORTHO05D005918 1.3e-19 100.1 85 56.5
MELO3C008708.2 Cucumis melo HOM05D004964 ORTHO05D005918 1.3e-19 100.1 85 55.3
Atru.chr2.987 Acer truncatum HOM05D004964 ORTHO05D005918 2.9e-19 99.0 85 56.5
A06p47210 Brassica napus HOM05D004964 ORTHO05D005918 3.7e-19 98.6 158 36.7
BraA06t27592Z Brassica rapa HOM05D004964 ORTHO05D005918 3.7e-19 98.6 158 36.7
Gorai.004G249200 Gossypium raimondii HOM05D004964 ORTHO05D005918 3.7e-19 98.6 85 55.3
A09p21080 Brassica napus HOM05D004964 ORTHO05D005918 4.9e-19 98.2 158 38.6
Haze_04423 Corylus avellana HOM05D004964 ORTHO05D005918 4.9e-19 98.2 68 66.2
AL1G20790 Arabidopsis lyrata HOM05D004964 ORTHO05D005918 6.4e-19 97.8 158 37.3
Gohir.D08G234400 Gossypium hirsutum HOM05D004964 ORTHO05D005918 6.4e-19 97.8 85 55.3
Sp2g09220 Schrenkiella parvula HOM05D004964 ORTHO05D005918 6.4e-19 97.8 158 37.3
Nitab4.5_0005396g0030 Nicotiana tabacum HOM05D004964 ORTHO05D005918 8.3e-19 97.4 85 52.9
Sc10g0001190 Simmondsia chinensis HOM05D004964 ORTHO05D005918 1.1e-18 97.1 157 35.7
Thhalv10000880m.g Eutrema salsugineum HOM05D004964 ORTHO05D005918 1.4e-18 96.7 158 38.0
SalBow6G5984 Salvia bowleyana HOM05D004964 ORTHO05D005918 1.4e-18 96.7 154 35.1
Phvul.010G051000 Phaseolus vulgaris HOM05D004964 ORTHO05D005918 4.1e-18 95.1 85 50.6
unitig_46.g18500 Utricularia gibba HOM05D004964 ORTHO05D005918 5.4e-18 94.7 185 36.2
unitig_47.g30763 Utricularia gibba HOM05D004964 ORTHO05D005918 5.4e-18 94.7 185 36.2
Aqoxy5G02134 Aquilegia oxysepala HOM05D004964 ORTHO05D005918 1.2e-17 93.6 149 35.6
AL1G47570 Arabidopsis lyrata HOM05D004964 ORTHO05D005918 1.2e-17 93.6 85 54.1
BcaC06g31621 Brassica carinata HOM05D004964 ORTHO05D005918 2.0e-17 92.8 158 35.4
Eucgr.H04227 Eucalyptus grandis HOM05D004964 ORTHO05D005918 2.0e-17 92.8 97 44.3
DCAR_022832 Daucus carota HOM05D004964 ORTHO05D005918 2.7e-17 92.4 85 52.9
Psat4g225120 Pisum sativum HOM05D004964 ORTHO05D005918 2.7e-17 92.4 106 44.3
Ca_14064_v3 Cicer arietinum L. HOM05D004964 ORTHO05D005918 3.5e-17 92.0 85 50.6
HanXRQChr07g0204481 Helianthus annuus HOM05D004964 ORTHO05D005918 3.5e-17 92.0 85 54.1
arahy.Tifrunner.gnm1.ann1.J3Q9FM Arachis hypogaea HOM05D004964 ORTHO05D005918 4.6e-17 91.7 85 49.4
Glyma.07G113400 Glycine max HOM05D004964 ORTHO05D005918 4.6e-17 91.7 85 51.8
Oeu016533.1 Olea europaea HOM05D004964 ORTHO05D005918 4.6e-17 91.7 88 51.1
AUR62008995 Chenopodium quinoa HOM05D004964 ORTHO05D005918 5.9e-17 91.3 84 52.4
ClCG11G010620 Citrullus lanatus HOM05D004964 ORTHO05D005918 5.9e-17 91.3 85 54.1
MBI07_g16903_MAGBIO Magnolia biondii HOM05D004964 ORTHO05D005918 5.9e-17 91.3 80 56.2
Lsat_1_v5_gn_8_24860 Lactuca sativa HOM05D004964 ORTHO05D005918 1.7e-16 89.7 85 49.4
Lj2A43G39 Lonicera japonica HOM05D004964 ORTHO05D005918 1.7e-16 89.7 161 34.8
BcaB07g30949 Brassica carinata HOM05D004964 ORTHO05D005918 2.3e-16 89.4 97 47.4
arahy.Tifrunner.gnm1.ann1.H9CC2T Arachis hypogaea HOM05D004964 ORTHO05D005918 3.0e-16 89.0 85 48.2
PSO210G1919 Papaver somniferum HOM05D004964 ORTHO05D005918 3.9e-16 88.6 161 31.7
ECA233G3630 Erigeron canadensis HOM05D004964 ORTHO05D005918 6.6e-16 87.8 85 50.6
Ciclev10020293m.g Citrus clementina HOM05D004964 ORTHO05D005918 1.1e-15 87.0 84 54.8
AUR62023306 Chenopodium quinoa HOM05D004964 ORTHO05D005918 1.9e-15 86.3 84 50.0
Lj3g0015193 Lotus japonicus HOM05D004964 ORTHO05D005918 1.9e-15 86.3 85 48.2
TPR.G19618 Trifolium pratense HOM05D004964 ORTHO05D005918 1.9e-15 86.3 85 48.2
TPR.G17496 Trifolium pratense HOM05D004964 ORTHO05D005918 2.5e-15 85.9 85 49.4
HPP92_003061 Vanilla planifolia HOM05D004964 ORTHO05D005918 3.3e-15 85.5 89 48.3
Medtr8g006785 Medicago truncatula HOM05D004964 ORTHO05D005918 4.3e-15 85.1 83 49.4
Cc02_g08800 Coffea canephora HOM05D004964 ORTHO05D005918 7.3e-15 84.3 85 50.6
BraA09t37709Z Brassica rapa HOM05D004964 ORTHO05D005918 1.2e-14 83.6 84 51.2
PSO210G0659 Papaver somniferum HOM05D004964 ORTHO05D005918 1.2e-14 83.6 156 32.1
TPR.G33137 Trifolium pratense HOM05D004964 ORTHO05D005918 1.2e-14 83.6 85 48.2
Aa31LG1G4790 Aethionema arabicum HOM05D004964 ORTHO05D005918 1.6e-14 83.2 85 44.7
Lalb_Chr03g0040321 Lupinus albus HOM05D004964 ORTHO05D005918 2.8e-14 82.4 85 47.1
CANSAT01G0497 Cannabis sativa HOM05D004964 ORTHO05D005918 1.1e-13 80.5 85 49.4
Glyma.03G113500 Glycine max HOM05D004964 ORTHO05D005918 5.2e-13 78.2 85 50.6
MD12G1248000 Malus domestica HOM05D004964 ORTHO05D005918 2.6e-12 75.9 156 32.1
Migut.F00800 Erythranthe guttata HOM05D004964 ORTHO05D005918 3.4e-12 75.5 85 47.1
SGA_v2.0_scaffold295G47511 Striga asiatica HOM05D004964 ORTHO05D005918 9.8e-12 73.9 87 46.0
Hund13719 Selenicereus undatus HOM05D004964 ORTHO05D005918 1.3e-11 73.6 85 45.9
Gohir.A08G217400 Gossypium hirsutum HOM05D004964 ORTHO05D005918 6.4e-11 71.2 139 35.3
SGA_v2.0_scaffold26G11247 Striga asiatica HOM05D004964 ORTHO05D005918 1.1e-10 70.5 136 36.0
ATR0736G161 Amborella trichopoda HOM05D004964 ORTHO05D005918 7.0e-10 67.8 84 42.9
AL1G20660 Arabidopsis lyrata HOM05D004964 ORTHO05D005918 2.7e-09 65.9 102 39.2
BolC9t55571H Brassica oleracea HOM05D004964 ORTHO05D005918 5.6e-07 58.2 84 40.5
Ah.10g037790 Amaranthus hybridus HOM05D004964 ORTHO05D005918 8.1e-06 54.3 68 42.6


User provided reference genes

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