Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p030054 Quercus lobata HOM05D006817 ORTHO05D008603 4.0e-54 214.5 112 100.0
QL06p040335 Quercus lobata HOM05D006817 ORTHO05D008603 2.4e-46 188.7 101 98.0
QL10p038395 Quercus lobata HOM05D006817 ORTHO05D008603 5.5e-43 177.6 94 98.9
QL08p064576 Quercus lobata HOM05D006817 ORTHO05D008603 2.7e-42 175.3 95 96.8
QL05p063879 Quercus lobata HOM05D006817 ORTHO05D008603 1.0e-41 173.3 98 94.9
QL09p047975 Quercus lobata HOM05D000176 ORTHO05D000106 2.5e-40 168.7 95 93.7
Haze_17339 Corylus avellana HOM05D006817 ORTHO05D008603 4.8e-39 164.5 93 92.5
Cfa001223 Carpinus fangiana HOM05D006817 ORTHO05D008603 1.1e-38 163.3 93 92.5
CiPaw.02G198400 Carya illinoinensis HOM05D006817 ORTHO05D008603 5.3e-38 161.0 95 88.4
Prupe.2G261900 Prunus persica HOM05D006817 ORTHO05D008603 5.9e-37 157.5 95 88.4
Potri.019G048700 Populus trichocarpa HOM05D006817 ORTHO05D008603 1.4e-35 152.9 93 90.3
Manes.10G004900 Manihot esculenta HOM05D006817 ORTHO05D008603 3.2e-35 151.8 95 87.4
Sabra19G0058300 Salix brachista HOM05D000055 ORTHO05D000057 9.4e-35 150.2 93 87.1
TAR623G0065 Trochodendron aralioides HOM05D006817 ORTHO05D008603 9.4e-35 150.2 95 86.3
MD01G1164100 Malus domestica HOM05D006817 ORTHO05D008603 1.2e-34 149.8 95 84.2
CANSAT56G1261 Cannabis sativa HOM05D006817 ORTHO05D008603 1.6e-34 149.4 92 89.1
Thecc.10G176900 Theobroma cacao HOM05D006817 ORTHO05D008603 1.6e-34 149.4 95 84.2
MD07G1231900 Malus domestica HOM05D006817 ORTHO05D008603 2.1e-34 149.1 95 83.2
RcHm_v2.0_Chr1g0371891 Rosa chinensis HOM05D006817 ORTHO05D008603 2.1e-34 149.1 100 82.0
FvH4_7g25670 Fragaria vesca HOM05D006817 ORTHO05D008603 3.6e-34 148.3 100 82.0
Atru.chr12.157 Acer truncatum HOM05D006817 ORTHO05D008603 4.7e-34 147.9 95 85.3
Gohir.A10G180300 Gossypium hirsutum HOM05D006817 ORTHO05D008603 7.9e-34 147.1 95 84.2
Gorai.011G210100 Gossypium raimondii HOM05D006817 ORTHO05D008603 7.9e-34 147.1 95 84.2
FAN10G2384 Fragaria x ananassa HOM05D006817 ORTHO05D008603 1.0e-33 146.7 93 87.1
Migut.F00593 Erythranthe guttata HOM05D006817 ORTHO05D008603 1.8e-33 146.0 93 84.9
FAN01G1353 Fragaria x ananassa HOM05D006817 ORTHO05D008603 2.3e-33 145.6 95 85.3
CSS0030257 Camellia sinensis var. sinensis HOM05D006817 ORTHO05D008603 3.0e-33 145.2 95 82.1
MSTRG.27274 Avicennia marina HOM05D006817 ORTHO05D008603 3.9e-33 144.8 95 83.2
COL.COLO4_10038 Corchorus olitorius HOM05D006817 ORTHO05D008603 3.9e-33 144.8 95 81.1
Peaxi162Scf00739g00017 Petunia axillaris HOM05D006817 ORTHO05D008603 6.7e-33 144.1 95 84.2
Actinidia00992 Actinidia chinensis HOM05D006817 ORTHO05D008603 8.8e-33 143.7 95 81.1
Eucgr.J00131 Eucalyptus grandis HOM05D006817 ORTHO05D008603 8.8e-33 143.7 93 83.9
Lalb_Chr22g0360921 Lupinus albus HOM05D006817 ORTHO05D008603 1.1e-32 143.3 95 80.0
CAN.G169.4 Capsicum annuum HOM05D006817 ORTHO05D008603 2.0e-32 142.5 95 83.2
TWI09G1614 Tripterygium wilfordii HOM05D006817 ORTHO05D008603 2.0e-32 142.5 93 82.8
Ca_12776_v3 Cicer arietinum L. HOM05D006817 ORTHO05D008603 3.3e-32 141.7 95 81.1
TPR.G24539 Trifolium pratense HOM05D006817 ORTHO05D008603 3.3e-32 141.7 95 81.1
Ciclev10031264m.g Citrus clementina HOM05D006817 ORTHO05D008603 4.4e-32 141.4 95 81.1
Psat6g035880 Pisum sativum HOM05D006817 ORTHO05D008603 4.4e-32 141.4 95 80.0
arahy.Tifrunner.gnm1.ann1.6QBV89 Arachis hypogaea HOM05D006817 ORTHO05D008603 5.7e-32 141.0 95 78.9
arahy.Tifrunner.gnm1.ann1.6ZT9VY Arachis hypogaea HOM05D006817 ORTHO05D008603 5.7e-32 141.0 95 78.9
Medtr1g007630 Medicago truncatula HOM05D006817 ORTHO05D008603 5.7e-32 141.0 95 80.0
PSO170G5674 Papaver somniferum HOM05D006817 ORTHO05D008603 5.7e-32 141.0 95 80.0
ECA232G4264 Erigeron canadensis HOM05D006817 ORTHO05D008603 7.4e-32 140.6 97 80.4
QL10p065865 Quercus lobata HOM05D006817 ORTHO05D008603 7.4e-32 140.6 75 96.0
Rhsim09G0184300 Rhododendron simsii HOM05D006817 ORTHO05D008603 7.4e-32 140.6 97 79.4
PSO017G6024 Papaver somniferum HOM05D006817 ORTHO05D008603 9.7e-32 140.2 95 80.0
Solyc06g050210.3 Solanum lycopersicum HOM05D006817 ORTHO05D008603 9.7e-32 140.2 95 82.1
Sopen06g015650 Solanum pennellii HOM05D006817 ORTHO05D008603 9.7e-32 140.2 95 82.1
GSVIVG01032704001 Vitis vinifera HOM05D006817 ORTHO05D008603 1.3e-31 139.8 95 81.1
Lj8A57G58 Lonicera japonica HOM05D006817 ORTHO05D008603 1.7e-31 139.4 93 83.9
Nn2g10348 Nelumbo nucifera HOM05D006817 ORTHO05D008603 1.7e-31 139.4 93 81.7
DCAR_014588 Daucus carota HOM05D006817 ORTHO05D008603 2.2e-31 139.0 95 81.1
Nitab4.5_0011715g0010 Nicotiana tabacum HOM05D006817 ORTHO05D008603 2.8e-31 138.7 95 81.1
Cc02_g05530 Coffea canephora HOM05D006817 ORTHO05D008603 3.7e-31 138.3 95 80.0
Lj5g0023407 Lotus japonicus HOM05D006817 ORTHO05D008603 3.7e-31 138.3 95 77.9
Ah.16g104230 Amaranthus hybridus HOM05D006817 ORTHO05D008603 6.3e-31 137.5 99 78.8
Aqoxy4G02362 Aquilegia oxysepala HOM05D006817 ORTHO05D008603 6.3e-31 137.5 95 78.9
Glyma.19G067100 Glycine max HOM05D006817 ORTHO05D008603 6.3e-31 137.5 95 78.9
HanXRQChr15g0493791 Helianthus annuus HOM05D006817 ORTHO05D008603 6.3e-31 137.5 97 78.4
Oeu036532.1 Olea europaea HOM05D006817 ORTHO05D008603 6.3e-31 137.5 95 80.0
Phvul.001G074700 Phaseolus vulgaris HOM05D006817 ORTHO05D008603 6.3e-31 137.5 95 78.9
THA.LOC104816518 Tarenaya hassleriana HOM05D006817 ORTHO05D008603 8.2e-31 137.1 93 76.3
PGR044G0301 Punica granatum HOM05D006817 ORTHO05D008603 1.1e-30 136.7 92 80.4
BraA10t45133Z Brassica rapa HOM05D006817 ORTHO05D008603 1.8e-30 136.0 99 73.7
Thhalv10013352m.g Eutrema salsugineum HOM05D006817 ORTHO05D008603 1.8e-30 136.0 93 76.3
Lsat_1_v5_gn_9_59361 Lactuca sativa HOM05D006817 ORTHO05D008603 1.8e-30 136.0 97 78.4
C09p71390 Brassica napus HOM05D006817 ORTHO05D008603 2.4e-30 135.6 93 76.3
BolC9t59902H Brassica oleracea HOM05D006817 ORTHO05D008603 2.4e-30 135.6 95 75.8
ClCG07G004850 Citrullus lanatus HOM05D006817 ORTHO05D008603 2.4e-30 135.6 95 78.9
CsaV3_5G010750 Cucumis sativus L. HOM05D006817 ORTHO05D008603 2.4e-30 135.6 95 78.9
AT5G05310 Arabidopsis thaliana HOM05D006817 ORTHO05D008603 4.1e-30 134.8 93 75.3
BcaC06g32240 Brassica carinata HOM05D006817 ORTHO05D008603 4.1e-30 134.8 93 76.3
A10p30880 Brassica napus HOM05D006817 ORTHO05D008603 4.1e-30 134.8 93 76.3
Sc11g0005730 Simmondsia chinensis HOM05D006817 ORTHO05D008603 4.1e-30 134.8 87 83.9
AUR62003430 Chenopodium quinoa HOM05D006817 ORTHO05D008603 5.3e-30 134.4 92 80.4
vmacro09974 Vaccinium macrocarpon HOM05D006817 ORTHO05D008603 5.3e-30 134.4 92 81.5
AUR62012358 Chenopodium quinoa HOM05D006817 ORTHO05D008603 6.9e-30 134.0 92 80.4
ATR0681G057 Amborella trichopoda HOM05D006817 ORTHO05D008603 1.2e-29 133.3 79 86.1
Sed0020006 Sechium edule HOM05D006817 ORTHO05D008603 1.2e-29 133.3 95 78.9
Sp6g37510 Schrenkiella parvula HOM05D006817 ORTHO05D008603 1.5e-29 132.9 93 75.3
SGA_v2.0_scaffold44G16643 Striga asiatica HOM05D006817 ORTHO05D008603 2.0e-29 132.5 95 76.8
EL10Ac2g04256 Beta vulgaris HOM05D006817 ORTHO05D008603 2.6e-29 132.1 99 76.8
CARHR207930 Cardamine hirsuta HOM05D006817 ORTHO05D008603 3.4e-29 131.7 92 75.0
CDE04G2280 Ceratophyllum demersum HOM05D006817 ORTHO05D008603 5.9e-29 131.0 96 71.9
MELO3C020113.2 Cucumis melo HOM05D006817 ORTHO05D008603 1.0e-28 130.2 98 76.5
Zm00001eb406320 Zea mays HOM05D006817 ORTHO05D008603 6.5e-28 127.5 83 84.3
HanXRQChr08g0222561 Helianthus annuus HOM05D006817 ORTHO05D008603 2.5e-27 125.6 90 74.4
Dinv21831 Davidia involucrata HOM05D004766 ORTHO05D006159 3.2e-27 125.2 108 69.4
Os12g0112300 Oryza sativa ssp. japonica HOM05D006817 ORTHO05D008603 4.2e-27 124.8 83 80.7
HPP92_019064 Vanilla planifolia HOM05D006817 ORTHO05D008603 4.2e-27 124.8 91 74.7
Aa31LG11G6330 Aethionema arabicum HOM05D006817 ORTHO05D008603 1.0e-25 120.2 110 63.6
Gohir.D10G187300 Gossypium hirsutum HOM05D006817 ORTHO05D008603 1.0e-25 120.2 95 72.6
SEGI_41528 Sequoiadendron giganteum HOM05D006817 ORTHO05D008603 6.7e-25 117.5 99 65.7
MBI15_g27349_MAGBIO Magnolia biondii HOM05D006817 ORTHO05D008603 1.3e-23 113.2 138 52.9
unitig_46.g18743 Utricularia gibba HOM05D006817 ORTHO05D008603 2.8e-23 112.1 110 60.0
FAN03G2834 Fragaria x ananassa HOM05D006817 ORTHO05D008603 7.0e-22 107.5 72 83.3
Pp3c22_2490 Physcomitrium patens HOM05D006817 ORTHO05D008603 7.7e-21 104.0 87 64.4
VMungo0647G0362 Vigna mungo HOM05D006817 ORTHO05D008603 1.2e-18 96.7 77 67.5
MD05G1328700 Malus domestica HOM05D006817 ORTHO05D008603 2.3e-17 92.4 65 76.9
Cpa.g.sc19.86 Carica papaya HOM05D006817 ORTHO05D008603 5.2e-17 91.3 51 88.2
AUR62031486 Chenopodium quinoa HOM05D006817 ORTHO05D008603 8.8e-17 90.5 77 67.5
Carub.0006s0424 Capsella rubella HOM05D006817 ORTHO05D008603 4.1e-06 55.1 41 70.7


User provided reference genes

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