Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p028195 Quercus lobata HOM05D015411 ORTHO05D000152 1.1e-113 413.3 209 100.0
QL07p032650 Quercus lobata HOM05D015411 ORTHO05D000152 1.1e-113 413.3 209 100.0
QL03p028264 Quercus lobata HOM05D015411 ORTHO05D000152 2.8e-40 169.5 133 71.4
QL02p075438 Quercus lobata HOM05D000264 ORTHO05D000152 9.0e-23 111.3 210 40.0
QL03p028151 Quercus lobata HOM05D015411 ORTHO05D000152 1.8e-15 87.0 95 53.7
QL03p028282 Quercus lobata HOM05D000264 ORTHO05D000152 2.6e-14 83.2 176 35.8
QL03p028135 Quercus lobata HOM05D015411 ORTHO05D043376 7.6e-14 81.6 205 31.2
MELO3C004399.2 Cucumis melo HOM05D000264 ORTHO05D000152 2.9e-13 79.7 138 37.7
CANSAT54G1172 Cannabis sativa HOM05D000264 ORTHO05D000152 1.1e-12 77.8 212 31.6
Sed0022421 Sechium edule HOM05D000264 ORTHO05D000152 1.9e-12 77.0 110 40.9
ClCG02G016850 Citrullus lanatus HOM05D000264 ORTHO05D000152 2.5e-12 76.6 153 35.3
ClCG02G016840 Citrullus lanatus HOM05D000264 ORTHO05D000152 3.2e-12 76.3 155 32.9
CsaV3_2G003930 Cucumis sativus L. HOM05D000264 ORTHO05D000152 3.2e-12 76.3 170 35.9
QL03p028310 Quercus lobata HOM05D000264 ORTHO05D000152 1.6e-11 73.9 177 33.3
MELO3C031561.2 Cucumis melo HOM05D015411 ORTHO05D000152 4.6e-11 72.4 125 40.0
QL02p020235 Quercus lobata HOM05D000264 ORTHO05D000152 6.7e-10 68.6 190 34.2
QL03p027896 Quercus lobata HOM05D000264 ORTHO05D000152 4.3e-09 65.9 108 40.7
QL03p027934 Quercus lobata HOM05D000264 ORTHO05D000152 1.3e-08 64.3 154 31.8
RcHm_v2.0_Chr2g0097241 Rosa chinensis HOM05D000264 ORTHO05D000152 2.8e-08 63.2 138 29.7
ClCG00G003980 Citrullus lanatus HOM05D000264 ORTHO05D000152 3.7e-08 62.8 119 31.9
ClCG02G016860 Citrullus lanatus HOM05D000264 ORTHO05D000152 3.7e-08 62.8 119 31.9
Prupe.4G145300 Prunus persica HOM05D000264 ORTHO05D000152 4.8e-08 62.4 123 35.0
QL03p027987 Quercus lobata HOM05D000264 ORTHO05D000152 4.8e-08 62.4 108 38.9
CANSAT11G2504 Cannabis sativa HOM05D015411 ORTHO05D043376 6.3e-08 62.0 114 28.1
Peaxi162Scf00583g00028 Petunia axillaris HOM05D000264 ORTHO05D000152 6.3e-08 62.0 108 32.4
Duzib212G1007 Durio zibethinus HOM05D000264 ORTHO05D000152 8.2e-08 61.6 130 35.4
Thecc.05G278100 Theobroma cacao HOM05D000264 ORTHO05D000152 1.1e-07 61.2 187 28.3
COL.COLO4_15399 Corchorus olitorius HOM05D000264 ORTHO05D000152 1.4e-07 60.8 111 34.2
FAN21G2481 Fragaria x ananassa HOM05D000264 ORTHO05D000152 2.4e-07 60.1 111 34.2
MD02G1117100 Malus domestica HOM05D000264 ORTHO05D000152 3.1e-07 59.7 149 32.2
QL09p045570 Quercus lobata HOM05D015411 ORTHO05D000152 3.1e-07 59.7 95 36.8
BcaC04g23968 Brassica carinata HOM05D000264 ORTHO05D000152 4.1e-07 59.3 127 30.7
BolC9t53212H Brassica oleracea HOM05D000264 ORTHO05D000152 4.1e-07 59.3 127 30.7
MD04G1020900 Malus domestica HOM05D000264 ORTHO05D000152 4.1e-07 59.3 126 31.0
FAN28G1654 Fragaria x ananassa HOM05D000264 ORTHO05D000152 5.3e-07 58.9 141 28.4
Gohir.D08G233800 Gossypium hirsutum HOM05D000264 ORTHO05D000152 6.9e-07 58.5 113 31.0
Gorai.004G248400 Gossypium raimondii HOM05D000264 ORTHO05D000152 6.9e-07 58.5 113 31.0
Prupe.7G182300 Prunus persica HOM05D000264 ORTHO05D000152 6.9e-07 58.5 138 29.7
CANSAT54G1206 Cannabis sativa HOM05D000264 ORTHO05D000152 9.0e-07 58.2 126 31.0
MD10G1197300 Malus domestica HOM05D000264 ORTHO05D000152 9.0e-07 58.2 130 34.6
Peaxi162Scf00071g00095 Petunia axillaris HOM05D000264 ORTHO05D000152 1.2e-06 57.8 135 34.1
GSVIVG01036249001 Vitis vinifera HOM05D000264 ORTHO05D000152 1.2e-06 57.8 133 30.1
CANSAT78G2137 Cannabis sativa HOM05D000264 ORTHO05D000152 1.5e-06 57.4 133 31.6
CsaV3_2G003910 Cucumis sativus L. HOM05D000264 ORTHO05D000152 1.5e-06 57.4 166 25.9
FvH4_1g10401 Fragaria vesca HOM05D000264 ORTHO05D000152 1.5e-06 57.4 145 30.3
Manes.09G150800 Manihot esculenta HOM05D000264 ORTHO05D000152 1.5e-06 57.4 144 31.9
GSVIVG01036243001 Vitis vinifera HOM05D000264 ORTHO05D000152 1.5e-06 57.4 133 33.1
A09p02790 Brassica napus HOM05D000264 ORTHO05D000152 2.0e-06 57.0 124 31.5
C03p36730 Brassica napus HOM05D000264 ORTHO05D000152 2.0e-06 57.0 138 31.9
BolC3t15987H Brassica oleracea HOM05D000264 ORTHO05D000152 2.0e-06 57.0 138 31.9
CSS0004918 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 2.0e-06 57.0 137 30.7
CANSAT11G0583 Cannabis sativa HOM05D000264 ORTHO05D000152 2.0e-06 57.0 80 35.0
MELO3C004404.2 Cucumis melo HOM05D000264 ORTHO05D000152 2.0e-06 57.0 107 30.8
Duzib151G0098 Durio zibethinus HOM05D000264 ORTHO05D000152 2.0e-06 57.0 163 34.4
Duzib212G0970 Durio zibethinus HOM05D000264 ORTHO05D000152 2.0e-06 57.0 126 34.9
Oeu032605.1 Olea europaea HOM05D000264 ORTHO05D000152 2.0e-06 57.0 109 32.1
Prupe.4G144500 Prunus persica HOM05D000264 ORTHO05D000152 2.0e-06 57.0 132 31.8
SalBow7G2339 Salvia bowleyana HOM05D000097 ORTHO05D000041 2.6e-06 56.6 130 33.1
Sed0013798 Sechium edule HOM05D000454 ORTHO05D000591 2.6e-06 56.6 69 42.0
COL.COLO4_15396 Corchorus olitorius HOM05D000264 ORTHO05D000152 3.4e-06 56.2 111 35.1
Eucgr.C03485 Eucalyptus grandis HOM05D000097 ORTHO05D000041 3.4e-06 56.2 129 34.1
Eucgr.C03638 Eucalyptus grandis HOM05D000097 ORTHO05D000041 3.4e-06 56.2 128 34.4
FvH4_1g10380 Fragaria vesca HOM05D000264 ORTHO05D000152 3.4e-06 56.2 159 27.0
FAN19G1494 Fragaria x ananassa HOM05D000264 ORTHO05D000152 3.4e-06 56.2 159 27.0
Lj3A662G12 Lonicera japonica HOM05D000264 ORTHO05D000152 3.4e-06 56.2 112 33.0
Thecc.05G278400 Theobroma cacao HOM05D000264 ORTHO05D000152 3.4e-06 56.2 160 26.9
BcaB01g01945 Brassica carinata HOM05D000264 ORTHO05D000152 4.5e-06 55.8 127 29.9
Eucgr.F00988 Eucalyptus grandis HOM05D000264 ORTHO05D000152 4.5e-06 55.8 106 34.9
Oeu032604.1 Olea europaea HOM05D000264 ORTHO05D000152 4.5e-06 55.8 126 31.7
QL03p016551 Quercus lobata HOM05D000264 ORTHO05D000152 4.5e-06 55.8 113 32.7
QL03p028233 Quercus lobata HOM05D000264 ORTHO05D000152 4.5e-06 55.8 45 53.3
Thecc.07G052400 Theobroma cacao HOM05D000264 ORTHO05D000152 4.5e-06 55.8 106 35.8
GSVIVG01010731001 Vitis vinifera HOM05D000264 ORTHO05D000152 4.5e-06 55.8 137 28.5
Duzib177G0309 Durio zibethinus HOM05D000264 ORTHO05D000152 5.9e-06 55.5 166 27.1
SEGI_12601 Sequoiadendron giganteum HOM05D000264 ORTHO05D000152 5.9e-06 55.5 111 36.0
GSVIVG01020530001 Vitis vinifera HOM05D000264 ORTHO05D000152 5.9e-06 55.5 159 30.2
ClCG04G008570 Citrullus lanatus HOM05D000454 ORTHO05D000591 7.7e-06 55.1 69 42.0
ClCG06G011640 Citrullus lanatus HOM05D000454 ORTHO05D000591 1.0e-05 54.7 69 42.0
MELO3C003092.2 Cucumis melo HOM05D000454 ORTHO05D000591 1.0e-05 54.7 69 42.0
CsaV3_4G024590 Cucumis sativus L. HOM05D000454 ORTHO05D000591 1.0e-05 54.7 69 42.0
Lj3C792T0 Lonicera japonica HOM05D000264 ORTHO05D000152 1.0e-05 54.7 108 32.4
Peaxi162Scf00156g00102 Petunia axillaris HOM05D000264 ORTHO05D000152 1.0e-05 54.7 118 33.1
Sabra19G0137200 Salix brachista HOM05D021030 ORTHO05D000152 1.0e-05 54.7 104 36.5
Sabra19G0137300 Salix brachista HOM05D021030 ORTHO05D000152 1.0e-05 54.7 104 36.5
Sc16g0001300 Simmondsia chinensis HOM05D000264 ORTHO05D000152 1.0e-05 54.7 155 30.3


User provided reference genes

Program Settings