Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p027576 Quercus lobata HOM05D000046 ORTHO05D004973 4.1e-92 341.3 161 100.0
QL07p011918 Quercus lobata HOM05D000046 ORTHO05D004973 4.0e-55 218.4 303 43.6
QL03p027553 Quercus lobata HOM05D000046 ORTHO05D004973 4.9e-53 211.5 304 42.8
QL07p011930 Quercus lobata HOM05D000134 ORTHO05D004973 3.4e-30 135.6 88 75.0
QL03p027383 Quercus lobata HOM05D000046 ORTHO05D004973 3.4e-14 82.4 41 87.8
PGSC0003DMG400005129 Solanum tuberosum HOM05D000046 ORTHO05D004973 9.4e-12 74.3 69 50.7
Dinv08386 Davidia involucrata HOM05D001277 ORTHO05D004973 6.1e-11 71.6 90 43.3
CANSAT01G2930 Cannabis sativa HOM05D000046 ORTHO05D004973 1.4e-10 70.5 63 50.8
QL04p038214 Quercus lobata HOM05D000046 ORTHO05D004973 1.4e-10 70.5 64 53.1
Dinv24872 Davidia involucrata HOM05D000046 ORTHO05D004973 3.0e-10 69.3 67 47.8
Sopen01g049150 Solanum pennellii HOM05D000046 ORTHO05D004973 3.0e-10 69.3 65 50.8
CiPaw.13G032300 Carya illinoinensis HOM05D000046 ORTHO05D004973 3.9e-10 68.9 63 52.4
COL.COLO4_27658 Corchorus olitorius HOM05D000015 ORTHO05D004973 8.8e-10 67.8 216 29.6
Rhsim11G0188000 Rhododendron simsii HOM05D000046 ORTHO05D004973 1.1e-09 67.4 85 42.4
Dinv17568 Davidia involucrata HOM05D000046 ORTHO05D004973 1.5e-09 67.0 58 55.2
MD13G1120500 Malus domestica HOM05D000046 ORTHO05D004973 2.0e-09 66.6 68 45.6
Nitab4.5_0008048g0010 Nicotiana tabacum HOM05D000134 ORTHO05D004973 2.6e-09 66.2 60 51.7
Prupe.1G224700 Prunus persica HOM05D000046 ORTHO05D004973 2.6e-09 66.2 68 47.1
PGSC0003DMG400005128 Solanum tuberosum HOM05D000046 ORTHO05D004973 4.4e-09 65.5 60 46.7
Solyc01g106870.4 Solanum lycopersicum HOM05D000046 ORTHO05D004973 5.7e-09 65.1 65 47.7
Peaxi162Scf00299g00046 Petunia axillaris HOM05D000046 ORTHO05D004973 9.7e-09 64.3 69 44.9
Peaxi162Scf00299g00421 Petunia axillaris HOM05D000046 ORTHO05D004973 9.7e-09 64.3 69 44.9
vmacro17178 Vaccinium macrocarpon HOM05D000046 ORTHO05D004973 9.7e-09 64.3 67 43.3
ClCG11G013570 Citrullus lanatus HOM05D000046 ORTHO05D004973 1.7e-08 63.5 59 50.8
Cfa011165 Carpinus fangiana HOM05D000046 ORTHO05D004973 2.2e-08 63.2 63 47.6
Dinv19543 Davidia involucrata HOM05D000046 ORTHO05D004973 2.2e-08 63.2 81 44.4
Peaxi162Scf00299g00044 Petunia axillaris HOM05D000046 ORTHO05D004973 3.7e-08 62.4 54 51.9
Dinv04924 Davidia involucrata HOM05D000046 ORTHO05D004973 4.8e-08 62.0 62 48.4
Dinv16010 Davidia involucrata HOM05D000046 ORTHO05D004973 4.8e-08 62.0 77 41.6
Dinv03407 Davidia involucrata HOM05D000046 ORTHO05D004973 6.3e-08 61.6 82 43.9
RhsimUnG0083400 Rhododendron simsii HOM05D000046 ORTHO05D004973 6.3e-08 61.6 65 44.6
Sed0002604 Sechium edule HOM05D000046 ORTHO05D004973 6.3e-08 61.6 59 47.5
FvH4_4g23630 Fragaria vesca HOM05D000046 ORTHO05D004973 8.2e-08 61.2 53 54.7
FAN12G1200 Fragaria x ananassa HOM05D000046 ORTHO05D004973 8.2e-08 61.2 53 54.7
Hma1.2p1_1198F.1_g266290 Hydrangea macrophylla HOM05D000046 ORTHO05D004973 8.2e-08 61.2 107 36.4
Lalb_Chr12g0207891 Lupinus albus HOM05D000046 ORTHO05D004973 8.2e-08 61.2 64 46.9
FAN07G0274 Fragaria x ananassa HOM05D000046 ORTHO05D004973 1.1e-07 60.8 78 48.7
FAN17G1565 Fragaria x ananassa HOM05D000046 ORTHO05D004973 1.1e-07 60.8 53 54.7
Nitab4.5_0001773g0020 Nicotiana tabacum HOM05D000046 ORTHO05D004973 1.1e-07 60.8 54 51.9
MELO3C011857.2 Cucumis melo HOM05D000046 ORTHO05D004973 1.4e-07 60.5 83 38.6
Glyma.03G032300 Glycine max HOM05D000046 ORTHO05D004973 1.4e-07 60.5 60 48.3
RcHm_v2.0_Chr4g0430091 Rosa chinensis HOM05D000046 ORTHO05D004973 1.4e-07 60.5 78 51.3
CsaV3_5G030190 Cucumis sativus L. HOM05D000046 ORTHO05D004973 1.8e-07 60.1 80 38.8
Dinv00588 Davidia involucrata HOM05D000046 ORTHO05D004973 1.8e-07 60.1 62 46.8
PGR142G1475 Punica granatum HOM05D000046 ORTHO05D004973 2.4e-07 59.7 61 45.9
Hma1.2p1_0981F.1_g243670 Hydrangea macrophylla HOM05D000046 ORTHO05D004973 3.1e-07 59.3 62 43.5
Haze_02681 Corylus avellana HOM05D000046 ORTHO05D004973 5.3e-07 58.5 53 52.8
Dinv01852 Davidia involucrata HOM05D000046 ORTHO05D004973 5.3e-07 58.5 81 42.0
Nitab4.5_0001773g0010 Nicotiana tabacum HOM05D000046 ORTHO05D004973 5.3e-07 58.5 62 51.6
Peaxi162Scf00016g03247 Petunia axillaris HOM05D000046 ORTHO05D004973 5.3e-07 58.5 63 47.6
Migut.N01887 Erythranthe guttata HOM05D000046 ORTHO05D004973 7.0e-07 58.2 62 43.5
COL.COLO4_32314 Corchorus olitorius HOM05D000046 ORTHO05D004973 1.2e-06 57.4 60 45.0
Hma1.2p1_1500F.1_g287320 Hydrangea macrophylla HOM05D000046 ORTHO05D004973 1.2e-06 57.4 61 47.5
Hma1.2p1_1718F.1_g299160 Hydrangea macrophylla HOM05D000046 ORTHO05D004973 1.2e-06 57.4 61 47.5
Medtr4g027305 Medicago truncatula HOM05D000013 ORTHO05D004973 1.2e-06 57.4 58 48.3
Rhsim01G0103100 Rhododendron simsii HOM05D000046 ORTHO05D004973 1.2e-06 57.4 81 38.3
COL.COLO4_32312 Corchorus olitorius HOM05D000046 ORTHO05D004973 2.0e-06 56.6 64 42.2
Medtr4g027215 Medicago truncatula HOM05D000046 ORTHO05D004973 2.0e-06 56.6 53 50.9
Rhsim01G0102900 Rhododendron simsii HOM05D000046 ORTHO05D004973 2.0e-06 56.6 81 37.0
RhsimUnG0082200 Rhododendron simsii HOM05D000046 ORTHO05D004973 2.0e-06 56.6 81 37.0
Dinv02612 Davidia involucrata HOM05D000046 ORTHO05D004973 2.6e-06 56.2 61 42.6
Lj2A707T13 Lonicera japonica HOM05D000046 ORTHO05D004973 3.5e-06 55.8 60 51.7
Lj3A586G10 Lonicera japonica HOM05D000046 ORTHO05D004973 3.5e-06 55.8 74 39.2
Nitab4.5_0006483g0030 Nicotiana tabacum HOM05D000046 ORTHO05D004973 3.5e-06 55.8 92 38.0
Sed0007828 Sechium edule HOM05D000046 ORTHO05D004973 3.5e-06 55.8 59 42.4
Lj2A703T54 Lonicera japonica HOM05D000046 ORTHO05D004973 4.5e-06 55.5 52 55.8
Lj3A585G41 Lonicera japonica HOM05D000046 ORTHO05D004973 4.5e-06 55.5 74 37.8
Rhsim01G0103400 Rhododendron simsii HOM05D000046 ORTHO05D004973 4.5e-06 55.5 81 37.0
TWI32G0062 Tripterygium wilfordii HOM05D000134 ORTHO05D004973 4.5e-06 55.5 102 35.3
Lj3C594T2 Lonicera japonica HOM05D000046 ORTHO05D004973 5.9e-06 55.1 66 39.4
Lju414C5G9 Lonicera japonica HOM05D000046 ORTHO05D004973 5.9e-06 55.1 74 37.8
Lj3C596T9 Lonicera japonica HOM05D000046 ORTHO05D004973 7.7e-06 54.7 63 47.6
Lju414C5T8 Lonicera japonica HOM05D000046 ORTHO05D004973 7.7e-06 54.7 63 47.6
QL05p045185 Quercus lobata HOM05D000134 ORTHO05D004973 7.7e-06 54.7 78 39.7
TPR.G5010 Trifolium pratense HOM05D000046 ORTHO05D004973 7.7e-06 54.7 65 41.5


User provided reference genes

Program Settings