Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p025800 Quercus lobata HOM05D003908 ORTHO05D004488 1.0e-64 250.0 130 100.0
CANSAT21G0496 Cannabis sativa HOM05D003908 ORTHO05D004488 1.4e-61 239.6 130 95.4
Cfa006421 Carpinus fangiana HOM05D003908 ORTHO05D004488 2.3e-61 238.8 130 93.8
Eucgr.C04384 Eucalyptus grandis HOM05D003908 ORTHO05D004488 6.8e-61 237.3 130 93.1
PGR031G1854 Punica granatum HOM05D003908 ORTHO05D004488 6.8e-61 237.3 130 93.8
ATR0787G044 Amborella trichopoda HOM05D003908 ORTHO05D004488 8.8e-61 236.9 130 93.8
CiPaw.08G123800 Carya illinoinensis HOM05D003908 ORTHO05D004488 8.8e-61 236.9 130 93.8
GSVIVG01031574001 Vitis vinifera HOM05D003908 ORTHO05D004488 8.8e-61 236.9 130 93.8
Eucgr.B02621 Eucalyptus grandis HOM05D003908 ORTHO05D004488 1.2e-60 236.5 130 92.3
CAN.G1299.5 Capsicum annuum HOM05D003908 ORTHO05D004488 1.5e-60 236.1 130 92.3
Prupe.5G006500 Prunus persica HOM05D003908 ORTHO05D004488 1.5e-60 236.1 130 93.1
Ciclev10002833m.g Citrus clementina HOM05D003908 ORTHO05D004488 2.0e-60 235.7 130 94.6
Prupe.6G005500 Prunus persica HOM05D003908 ORTHO05D004488 2.6e-60 235.3 130 93.1
PGSC0003DMG400009421 Solanum tuberosum HOM05D003908 ORTHO05D004488 3.4e-60 235.0 130 92.3
TAR633G1149 Trochodendron aralioides HOM05D003908 ORTHO05D004488 7.5e-60 233.8 130 92.3
Solyc02g068450.3 Solanum lycopersicum HOM05D003908 ORTHO05D004488 9.8e-60 233.4 130 91.5
Sopen02g017590 Solanum pennellii HOM05D003908 ORTHO05D004488 9.8e-60 233.4 130 91.5
THA.LOC104825983 Tarenaya hassleriana HOM05D003908 ORTHO05D004488 9.8e-60 233.4 130 90.8
Nitab4.5_0000360g0160 Nicotiana tabacum HOM05D003908 ORTHO05D004488 1.7e-59 232.6 130 92.3
Nitab4.5_0002776g0060 Nicotiana tabacum HOM05D003908 ORTHO05D004488 1.7e-59 232.6 130 92.3
Cc09_g07930 Coffea canephora HOM05D003908 ORTHO05D004488 2.2e-59 232.3 130 89.2
Gohir.A08G215400 Gossypium hirsutum HOM05D003908 ORTHO05D004488 2.2e-59 232.3 130 90.0
Gorai.004G246600 Gossypium raimondii HOM05D003908 ORTHO05D004488 2.2e-59 232.3 130 90.0
Aqoxy5G00367 Aquilegia oxysepala HOM05D003908 ORTHO05D004488 2.8e-59 231.9 130 92.3
MBI07_g21062_MAGBIO Magnolia biondii HOM05D003908 ORTHO05D004488 2.8e-59 231.9 130 90.8
Nitab4.5_0000443g0180 Nicotiana tabacum HOM05D003908 ORTHO05D004488 2.8e-59 231.9 130 90.8
Thecc.05G283700 Theobroma cacao HOM05D003908 ORTHO05D004488 2.8e-59 231.9 130 90.0
Aqoxy6G02470 Aquilegia oxysepala HOM05D003908 ORTHO05D004488 3.7e-59 231.5 130 91.5
MBI10_g16831_MAGBIO Magnolia biondii HOM05D003908 ORTHO05D004488 3.7e-59 231.5 130 91.5
THA.LOC104801254 Tarenaya hassleriana HOM05D003908 ORTHO05D004488 3.7e-59 231.5 130 90.0
Lalb_Chr12g0209211 Lupinus albus HOM05D003908 ORTHO05D004488 4.8e-59 231.1 130 88.5
Cpa.g.sc117.89 Carica papaya HOM05D003908 ORTHO05D004488 6.3e-59 230.7 130 90.8
arahy.Tifrunner.gnm1.ann1.95Q6AF Arachis hypogaea HOM05D003908 ORTHO05D004488 8.3e-59 230.3 130 90.8
Duzib106G0327 Durio zibethinus HOM05D003908 ORTHO05D004488 8.3e-59 230.3 129 89.9
Atru.chr2.813 Acer truncatum HOM05D003908 ORTHO05D004488 1.1e-58 229.9 130 90.8
SalBow3G3620 Salvia bowleyana HOM05D003908 ORTHO05D004488 1.1e-58 229.9 130 90.8
Sed0027410 Sechium edule HOM05D003908 ORTHO05D004488 1.1e-58 229.9 130 90.0
arahy.Tifrunner.gnm1.ann1.Y10HXA Arachis hypogaea HOM05D003908 ORTHO05D004488 1.4e-58 229.6 130 90.0
Ca_18213_v3 Cicer arietinum L. HOM05D003908 ORTHO05D004488 1.4e-58 229.6 130 89.2
COL.COLO4_15346 Corchorus olitorius HOM05D003908 ORTHO05D004488 1.4e-58 229.6 129 90.7
FvH4_6g02960 Fragaria vesca HOM05D003908 ORTHO05D004488 1.4e-58 229.6 130 90.0
FAN05G0658 Fragaria x ananassa HOM05D003908 ORTHO05D004488 1.4e-58 229.6 130 90.0
Os02g0824700 Oryza sativa ssp. japonica HOM05D003908 ORTHO05D004488 1.4e-58 229.6 130 89.2
Os04g0137500 Oryza sativa ssp. japonica HOM05D003908 ORTHO05D004488 1.4e-58 229.6 130 89.2
Actinidia19977 Actinidia chinensis HOM05D003908 ORTHO05D004488 1.8e-58 229.2 130 90.8
Actinidia27523 Actinidia chinensis HOM05D003908 ORTHO05D004488 1.8e-58 229.2 130 90.8
arahy.Tifrunner.gnm1.ann1.LT9XWZ Arachis hypogaea HOM05D003908 ORTHO05D004488 1.8e-58 229.2 130 89.2
FAN09G2689 Fragaria x ananassa HOM05D003908 ORTHO05D004488 1.8e-58 229.2 130 90.0
Peaxi162Scf00199g00925 Petunia axillaris HOM05D003908 ORTHO05D004488 1.8e-58 229.2 130 90.8
Zm00001eb330190 Zea mays HOM05D003908 ORTHO05D004488 1.8e-58 229.2 130 87.7
Atru.chr4.2009 Acer truncatum HOM05D003908 ORTHO05D004488 2.4e-58 228.8 130 90.0
Dinv34562 Davidia involucrata HOM05D003908 ORTHO05D004488 2.4e-58 228.8 130 90.0
RcHm_v2.0_Chr3g0451151 Rosa chinensis HOM05D003908 ORTHO05D004488 3.1e-58 228.4 130 90.0
FAN14G5491 Fragaria x ananassa HOM05D003908 ORTHO05D004488 5.4e-58 227.6 130 89.2
unitig_22.g5278 Utricularia gibba HOM05D003908 ORTHO05D004488 5.4e-58 227.6 130 90.0
MSTRG.21514 Avicennia marina HOM05D003908 ORTHO05D004488 1.2e-57 226.5 130 89.2
Gohir.D08G232100 Gossypium hirsutum HOM05D003908 ORTHO05D004488 1.2e-57 226.5 130 88.5
CSS0036720 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 1.6e-57 226.1 130 87.7
CSS0040700 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 1.6e-57 226.1 130 87.7
Duzib138G1305 Durio zibethinus HOM05D003908 ORTHO05D004488 1.6e-57 226.1 130 88.5
Hma1.2p1_0760F.1_g214230 Hydrangea macrophylla HOM05D003908 ORTHO05D004488 1.6e-57 226.1 130 86.9
Lj4g0023890 Lotus japonicus HOM05D003908 ORTHO05D004488 1.6e-57 226.1 130 87.7
Thecc.01G268300 Theobroma cacao HOM05D003908 ORTHO05D004488 1.6e-57 226.1 130 88.5
Zm00001eb111070 Zea mays HOM05D003908 ORTHO05D004488 2.0e-57 225.7 130 86.2
Aa31LG5G2250 Aethionema arabicum HOM05D003908 ORTHO05D004488 2.7e-57 225.3 130 86.2
CSS0040042 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 2.7e-57 225.3 130 88.5
Migut.D00367 Erythranthe guttata HOM05D003908 ORTHO05D004488 2.7e-57 225.3 130 88.5
HPP92_018775 Vanilla planifolia HOM05D003908 ORTHO05D004488 2.7e-57 225.3 130 86.2
CSS0027656 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 4.5e-57 224.6 130 86.9
Hma1.2p1_0172F.1_g076150 Hydrangea macrophylla HOM05D003908 ORTHO05D004488 4.5e-57 224.6 130 87.7
Nn3g19495 Nelumbo nucifera HOM05D003908 ORTHO05D004488 4.5e-57 224.6 130 89.2
Rhsim01G0201300 Rhododendron simsii HOM05D003908 ORTHO05D004488 4.5e-57 224.6 130 86.9
ECA240G0363 Erigeron canadensis HOM05D003908 ORTHO05D004488 5.9e-57 224.2 130 86.2
Gohir.D08G206400 Gossypium hirsutum HOM05D003908 ORTHO05D004488 5.9e-57 224.2 130 86.9
Gorai.004G218600 Gossypium raimondii HOM05D003908 ORTHO05D004488 5.9e-57 224.2 130 86.9
Rhsim01G0270200 Rhododendron simsii HOM05D003908 ORTHO05D004488 5.9e-57 224.2 130 86.9
Sed0024016 Sechium edule HOM05D003908 ORTHO05D004488 5.9e-57 224.2 130 87.7
SGA_v2.0_scaffold138G35289 Striga asiatica HOM05D003696 ORTHO05D005158 5.9e-57 224.2 130 88.5
TWI12G1100 Tripterygium wilfordii HOM05D003908 ORTHO05D004488 7.7e-57 223.8 130 86.9
HPP92_001854 Vanilla planifolia HOM05D003908 ORTHO05D004488 7.7e-57 223.8 130 86.2
ClCG03G017370 Citrullus lanatus HOM05D003908 ORTHO05D004488 1.0e-56 223.4 130 87.7
Manes.07G050600 Manihot esculenta HOM05D003908 ORTHO05D004488 1.0e-56 223.4 130 87.7
Hund02874 Selenicereus undatus HOM05D003908 ORTHO05D004488 1.0e-56 223.4 129 87.6
MELO3C015218.2 Cucumis melo HOM05D003908 ORTHO05D004488 1.3e-56 223.0 129 88.4
CsaV3_1G042520 Cucumis sativus L. HOM05D003908 ORTHO05D004488 1.3e-56 223.0 129 88.4
Glyma.05G135300 Glycine max HOM05D003908 ORTHO05D004488 1.3e-56 223.0 130 86.2
Glyma.08G090500 Glycine max HOM05D003908 ORTHO05D004488 1.3e-56 223.0 130 86.2
Potri.005G217600 Populus trichocarpa HOM05D003908 ORTHO05D004488 1.3e-56 223.0 130 88.5
Sc17g0001030 Simmondsia chinensis HOM05D003908 ORTHO05D004488 1.3e-56 223.0 130 86.2
Lsat_1_v5_gn_6_91060 Lactuca sativa HOM05D003908 ORTHO05D004488 1.7e-56 222.6 130 85.4
Oeu018177.1 Olea europaea HOM05D003908 ORTHO05D004488 1.7e-56 222.6 130 88.5
PSO210G0243 Papaver somniferum HOM05D003908 ORTHO05D004488 1.7e-56 222.6 130 89.2
PSO832G4196 Papaver somniferum HOM05D003908 ORTHO05D004488 1.7e-56 222.6 130 89.2
Gohir.A08G188000 Gossypium hirsutum HOM05D003908 ORTHO05D004488 2.3e-56 222.2 130 86.2
Phvul.002G186900 Phaseolus vulgaris HOM05D003908 ORTHO05D004488 2.3e-56 222.2 130 86.2
SGA_v2.0_scaffold580G53041 Striga asiatica HOM05D006471 ORTHO05D004488 2.3e-56 222.2 130 86.9
Sabra05G0166800 Salix brachista HOM05D003908 ORTHO05D004488 3.8e-56 221.5 130 88.5
Psat7g086640 Pisum sativum HOM05D003908 ORTHO05D004488 5.0e-56 221.1 130 86.2
Ah.02g111400 Amaranthus hybridus HOM05D003908 ORTHO05D004488 6.6e-56 220.7 129 86.0
TPR.G34752 Trifolium pratense HOM05D003908 ORTHO05D004488 6.6e-56 220.7 130 84.6
CDE09G0316 Ceratophyllum demersum HOM05D003908 ORTHO05D004488 1.1e-55 219.9 129 86.8
VMungo0251G3698 Vigna mungo HOM05D003908 ORTHO05D004488 1.1e-55 219.9 130 84.6
Lj1g0011223 Lotus japonicus HOM05D003908 ORTHO05D004488 1.5e-55 219.5 130 86.9
PSO135G0069 Papaver somniferum HOM05D003908 ORTHO05D004488 3.3e-55 218.4 130 86.9
PSO384G1262 Papaver somniferum HOM05D003908 ORTHO05D004488 3.3e-55 218.4 130 87.7
AL6G50430 Arabidopsis lyrata HOM05D003908 ORTHO05D004488 5.5e-55 217.6 126 83.3
Carub.0006s3452 Capsella rubella HOM05D003908 ORTHO05D004488 5.5e-55 217.6 126 83.3
TWI18G0751 Tripterygium wilfordii HOM05D003908 ORTHO05D004488 5.5e-55 217.6 130 84.6
Actinidia24932 Actinidia chinensis HOM05D005044 ORTHO05D006799 7.2e-55 217.2 123 89.4
CARHR250910 Cardamine hirsuta HOM05D003908 ORTHO05D004488 9.5e-55 216.9 126 83.3
Thhalv10029066m.g Eutrema salsugineum HOM05D003908 ORTHO05D004488 1.2e-54 216.5 126 84.9
BcaB01g02026 Brassica carinata HOM05D003908 ORTHO05D004488 1.6e-54 216.1 126 84.1
BcaB01g02477 Brassica carinata HOM05D003908 ORTHO05D004488 1.6e-54 216.1 126 84.1
BcaC04g24002 Brassica carinata HOM05D003908 ORTHO05D004488 1.6e-54 216.1 126 84.1
A03p30970 Brassica napus HOM05D003908 ORTHO05D004488 1.6e-54 216.1 126 84.1
A09p02050 Brassica napus HOM05D003908 ORTHO05D004488 1.6e-54 216.1 126 84.1
C09p02140 Brassica napus HOM05D003908 ORTHO05D004488 1.6e-54 216.1 126 84.1
BolC9t53144H Brassica oleracea HOM05D003908 ORTHO05D004488 1.6e-54 216.1 126 84.1
BcaC01g06745 Brassica carinata HOM05D003908 ORTHO05D004488 3.6e-54 214.9 126 83.3
C03p37740 Brassica napus HOM05D003908 ORTHO05D004488 3.6e-54 214.9 126 83.3
BolC3t16064H Brassica oleracea HOM05D003908 ORTHO05D004488 3.6e-54 214.9 126 83.3
Gohir.A13G052900 Gossypium hirsutum HOM05D003908 ORTHO05D004488 3.6e-54 214.9 129 85.3
Sp6g02530 Schrenkiella parvula HOM05D003908 ORTHO05D004488 3.6e-54 214.9 126 84.1
AT4G02620 Arabidopsis thaliana HOM05D003908 ORTHO05D004488 4.7e-54 214.5 126 82.5
EL10Ac5g10467 Beta vulgaris HOM05D003908 ORTHO05D004488 4.7e-54 214.5 130 83.1
Gorai.013G079800 Gossypium raimondii HOM05D003908 ORTHO05D004488 8.0e-54 213.8 129 85.3
Dinv04731 Davidia involucrata HOM05D003908 ORTHO05D004488 2.3e-53 212.2 114 93.9
HanXRQChr03g0088561 Helianthus annuus HOM05D003908 ORTHO05D004488 3.0e-53 211.8 114 91.2
Gohir.D13G069500 Gossypium hirsutum HOM05D003908 ORTHO05D004488 5.2e-53 211.1 129 83.7
MD04G1224300 Malus domestica HOM05D003908 ORTHO05D004488 5.2e-53 211.1 114 92.1
BraA09t35854Z Brassica rapa HOM05D003908 ORTHO05D004488 6.8e-53 210.7 129 82.2
BraA03t12274Z Brassica rapa HOM05D003908 ORTHO05D004488 2.0e-52 209.1 133 79.7
CSS0045088 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 2.6e-52 208.8 130 83.1
MD12G1241000 Malus domestica HOM05D003908 ORTHO05D004488 2.6e-52 208.8 114 91.2
C02p39240 Brassica napus HOM05D003908 ORTHO05D004488 4.9e-51 204.5 139 75.5
BolC2t09935H Brassica oleracea HOM05D003908 ORTHO05D004488 1.4e-50 203.0 139 74.8
Nitab4.5_0002305g0050 Nicotiana tabacum HOM05D003908 ORTHO05D004488 1.4e-50 203.0 110 92.7
arahy.Tifrunner.gnm1.ann1.XQ21SD Arachis hypogaea HOM05D003908 ORTHO05D004488 1.8e-50 202.6 109 92.7
Duzib133G0635 Durio zibethinus HOM05D003908 ORTHO05D004488 4.1e-50 201.4 114 88.6
Mapoly0079s0004 Marchantia polymorpha HOM05D003908 ORTHO05D004488 1.2e-49 199.9 123 78.0
vmacro14877 Vaccinium macrocarpon HOM05D003908 ORTHO05D004488 2.0e-49 199.1 159 69.2
Ciclev10022651m.g Citrus clementina HOM05D003908 ORTHO05D004488 3.5e-49 198.4 155 71.0
Pp3c6_17470 Physcomitrium patens HOM05D003908 ORTHO05D004488 5.9e-49 197.6 132 74.2
Pp3c25_8080 Physcomitrium patens HOM05D003908 ORTHO05D004488 3.9e-48 194.9 119 77.3
SGA_v2.0_scaffold1G00551 Striga asiatica HOM05D006471 ORTHO05D008157 5.0e-48 194.5 114 84.2
Peaxi162Scf00198g01017 Petunia axillaris HOM05D003908 ORTHO05D004488 8.6e-48 193.7 121 83.5
SMO367G0680 Selaginella moellendorffii HOM05D003908 ORTHO05D004488 3.3e-47 191.8 126 72.2
Haze_21722 Corylus avellana HOM05D003908 ORTHO05D004488 5.6e-47 191.0 129 79.1
CDE11G1041 Ceratophyllum demersum HOM05D005443 ORTHO05D004488 9.5e-47 190.3 100 93.0
CSS0024256 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 1.4e-45 186.4 105 87.6
CSS0029390 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 1.4e-45 186.4 105 87.6
CSS0046821 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 1.8e-45 186.0 102 89.2
CSS0044738 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 5.2e-45 184.5 117 80.3
CBR_g38932 Chara braunii HOM05D003908 ORTHO05D004488 2.0e-44 182.6 121 72.7
CSS0043230 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 4.1e-42 174.9 102 83.3
Actinidia04661 Actinidia chinensis HOM05D003908 ORTHO05D004488 1.6e-41 172.9 114 79.8
Actinidia21151 Actinidia chinensis HOM05D003908 ORTHO05D004488 1.6e-41 172.9 114 79.8
BcaC03g16154 Brassica carinata HOM05D003908 ORTHO05D004488 3.9e-40 168.3 98 81.6
COL.COLO4_30210 Corchorus olitorius HOM05D003908 ORTHO05D004488 1.6e-38 162.9 130 70.0
CSS0038153 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 3.6e-38 161.8 112 74.1
PRCOL_00000544 Prasinoderma coloniale HOM05D003908 ORTHO05D004488 4.7e-38 161.4 108 69.4
TAR362G1230 Trochodendron aralioides HOM05D003908 ORTHO05D004488 2.3e-37 159.1 102 80.4
Haze_04363 Corylus avellana HOM05D003908 ORTHO05D004488 4.0e-37 158.3 88 90.9
MCO03G460 Micromonas commoda HOM05D003908 ORTHO05D004488 6.8e-37 157.5 115 65.2
Hund09564 Selenicereus undatus HOM05D003908 ORTHO05D004488 1.2e-36 156.8 129 66.7
Cre10.g446550 Chlamydomonas reinhardtii HOM05D003908 ORTHO05D004488 1.7e-35 152.9 115 61.7
COL.COLO4_06708 Corchorus olitorius HOM05D003908 ORTHO05D004488 1.9e-34 149.4 82 89.0
Ah.11g050040 Amaranthus hybridus HOM05D005044 ORTHO05D006799 2.4e-34 149.1 82 89.0
CiPaw.04G181400 Carya illinoinensis HOM05D003908 ORTHO05D004488 5.1e-32 141.4 81 84.0
Lalb_Chr20g0122801 Lupinus albus HOM05D003908 ORTHO05D004488 5.2e-29 131.3 80 81.2
SEGI_40634 Sequoiadendron giganteum HOM05D003908 ORTHO05D004488 2.9e-27 125.6 78 79.5
AagrBONN_evm.TU.Sc2ySwM_368.148 Anthoceros agrestis HOM05D003908 ORTHO05D004488 2.4e-26 122.5 77 74.0
BcaB05g23651 Brassica carinata HOM05D003908 ORTHO05D004488 1.3e-24 116.7 113 56.6
Haze_26154 Corylus avellana HOM05D003908 ORTHO05D004488 1.3e-24 116.7 112 48.2
Nitab4.5_0000138g0160 Nicotiana tabacum HOM05D003908 ORTHO05D004488 5.1e-24 114.8 63 90.5
Nitab4.5_0008708g0010 Nicotiana tabacum HOM05D003908 ORTHO05D004488 2.8e-22 109.0 67 79.1
Actinidia30711 Actinidia chinensis HOM05D005044 ORTHO05D006799 2.4e-21 105.9 69 78.3
Lalb_Chr20g0122811 Lupinus albus HOM05D003908 ORTHO05D004488 8.9e-21 104.0 54 92.6
DCAR_018445 Daucus carota HOM05D003908 ORTHO05D004488 1.5e-20 103.2 51 96.1
DCAR_012514 Daucus carota HOM05D003908 ORTHO05D004488 4.4e-20 101.7 51 94.1
SHI24544 Sapria himalayana HOM05D003908 ORTHO05D000023 2.9e-19 99.0 67 71.6
Sopen12g012850 Solanum pennellii HOM05D003908 ORTHO05D004488 2.5e-15 85.9 58 81.0
AUR62011951 Chenopodium quinoa HOM05D003908 ORTHO05D004488 5.8e-12 74.7 48 77.1
CSS0012932 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 1.1e-10 70.5 35 88.6
Peaxi162Scf01294g00317 Petunia axillaris HOM05D003908 ORTHO05D004488 1.4e-10 70.1 35 91.4


User provided reference genes

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