Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p025010 Quercus lobata HOM05D005403 ORTHO05D006572 2.4e-47 191.8 94 100.0
CiPaw.08G124800 Carya illinoinensis HOM05D005403 ORTHO05D006572 1.2e-38 162.9 84 92.9
Dinv05370 Davidia involucrata HOM05D005403 ORTHO05D006572 4.9e-37 157.5 84 88.1
Prupe.6G341600 Prunus persica HOM05D005403 ORTHO05D006572 6.4e-37 157.1 84 90.5
TAR362G0997 Trochodendron aralioides HOM05D005403 ORTHO05D006572 1.1e-36 156.4 84 86.9
arahy.Tifrunner.gnm1.ann1.XU8J57 Arachis hypogaea HOM05D005403 ORTHO05D006572 2.4e-36 155.2 84 85.7
HanXRQChr15g0493451 Helianthus annuus HOM05D005403 ORTHO05D006572 3.2e-36 154.8 84 86.9
RcHm_v2.0_Chr3g0451391 Rosa chinensis HOM05D005403 ORTHO05D006572 3.2e-36 154.8 84 89.3
MD04G1222600 Malus domestica HOM05D005403 ORTHO05D006572 4.2e-36 154.5 84 86.9
Gohir.A13G170400 Gossypium hirsutum HOM05D005403 ORTHO05D006572 5.4e-36 154.1 83 85.5
Hund06962 Selenicereus undatus HOM05D005403 ORTHO05D006572 5.4e-36 154.1 84 85.7
SGA_v2.0_scaffold81G26087 Striga asiatica HOM05D005403 ORTHO05D006572 5.4e-36 154.1 84 88.1
Actinidia05774 Actinidia chinensis HOM05D005403 ORTHO05D006572 7.1e-36 153.7 84 85.7
Glyma.10G161600 Glycine max HOM05D005403 ORTHO05D006572 7.1e-36 153.7 84 83.3
Dinv20864 Davidia involucrata HOM05D005403 ORTHO05D006572 1.2e-35 152.9 84 85.7
Gohir.D13G175800 Gossypium hirsutum HOM05D005403 ORTHO05D006572 1.6e-35 152.5 83 84.3
MD12G1238700 Malus domestica HOM05D005403 ORTHO05D006572 1.6e-35 152.5 84 84.5
Cc02_g31920 Coffea canephora HOM05D005403 ORTHO05D006572 2.1e-35 152.1 84 84.5
TWI74G0584 Tripterygium wilfordii HOM05D005403 ORTHO05D006572 2.1e-35 152.1 84 86.9
CANSAT54G1830 Cannabis sativa HOM05D005403 ORTHO05D006572 2.7e-35 151.8 84 86.9
Gorai.013G201200 Gossypium raimondii HOM05D005403 ORTHO05D006572 3.5e-35 151.4 83 84.3
TWI77G0725 Tripterygium wilfordii HOM05D005403 ORTHO05D006572 3.5e-35 151.4 84 86.9
Haze_04345 Corylus avellana HOM05D005403 ORTHO05D006572 4.6e-35 151.0 99 76.8
Lsat_1_v5_gn_4_137100 Lactuca sativa HOM05D005403 ORTHO05D006572 4.6e-35 151.0 84 85.7
Actinidia30938 Actinidia chinensis HOM05D005403 ORTHO05D006572 6.0e-35 150.6 84 83.3
FvH4_6g03140 Fragaria vesca HOM05D005403 ORTHO05D006572 6.0e-35 150.6 84 85.7
FAN02G1200 Fragaria x ananassa HOM05D005403 ORTHO05D006572 6.0e-35 150.6 84 85.7
FAN09G2181 Fragaria x ananassa HOM05D005403 ORTHO05D006572 6.0e-35 150.6 84 85.7
FAN05G1135 Fragaria x ananassa HOM05D005403 ORTHO05D006572 7.9e-35 150.2 84 84.5
FAN05G5291 Fragaria x ananassa HOM05D005403 ORTHO05D006572 7.9e-35 150.2 84 84.5
Manes.08G133000 Manihot esculenta HOM05D005403 ORTHO05D006572 7.9e-35 150.2 82 84.1
THA.LOC104818636 Tarenaya hassleriana HOM05D005403 ORTHO05D006572 7.9e-35 150.2 84 84.5
Ca_10048_v3 Cicer arietinum L. HOM05D005403 ORTHO05D006572 1.0e-34 149.8 84 81.0
Duzib177G0905 Durio zibethinus HOM05D005403 ORTHO05D006572 1.0e-34 149.8 83 85.5
SGA_v2.0_scaffold80G25907 Striga asiatica HOM05D005403 ORTHO05D006572 1.0e-34 149.8 84 84.5
Thecc.05G286500 Theobroma cacao HOM05D005403 ORTHO05D006572 1.0e-34 149.8 81 86.4
TAR365G0414 Trochodendron aralioides HOM05D005403 ORTHO05D006572 1.0e-34 149.8 84 83.3
Eucgr.B02113 Eucalyptus grandis HOM05D005403 ORTHO05D006572 1.3e-34 149.4 84 83.3
Nn6g34152 Nelumbo nucifera HOM05D005403 ORTHO05D006572 1.3e-34 149.4 84 83.3
GSVIVG01021827001 Vitis vinifera HOM05D005403 ORTHO05D006572 1.3e-34 149.4 84 85.7
Migut.N01905 Erythranthe guttata HOM05D005403 ORTHO05D006572 1.8e-34 149.1 84 84.5
Lj5g0020047 Lotus japonicus HOM05D005403 ORTHO05D006572 1.8e-34 149.1 84 83.3
Ah.06g192240 Amaranthus hybridus HOM05D005403 ORTHO05D006572 2.3e-34 148.7 84 84.5
AT3G04780 Arabidopsis thaliana HOM05D005403 ORTHO05D006572 2.3e-34 148.7 84 84.5
Carub.0003s0395 Capsella rubella HOM05D005403 ORTHO05D006572 2.3e-34 148.7 84 84.5
Duzib106G1152 Durio zibethinus HOM05D005403 ORTHO05D006572 2.3e-34 148.7 83 83.1
FAN14G0649 Fragaria x ananassa HOM05D005403 ORTHO05D006572 2.3e-34 148.7 84 83.3
Manes.09G153900 Manihot esculenta HOM05D005403 ORTHO05D006572 2.3e-34 148.7 84 83.3
Oeu027466.2 Olea europaea HOM05D005403 ORTHO05D006572 3.0e-34 148.3 84 82.1
Nitab4.5_0005582g0040 Nicotiana tabacum HOM05D005403 ORTHO05D006572 3.9e-34 147.9 84 83.3
AL3G14940 Arabidopsis lyrata HOM05D005403 ORTHO05D006572 5.1e-34 147.5 84 83.3
CARHR079030 Cardamine hirsuta HOM05D005403 ORTHO05D006572 5.1e-34 147.5 84 83.3
Sp3g03620 Schrenkiella parvula HOM05D005403 ORTHO05D006572 6.7e-34 147.1 84 84.5
Nitab4.5_0004469g0080 Nicotiana tabacum HOM05D005403 ORTHO05D006572 8.7e-34 146.7 84 83.3
C05p62500 Brassica napus HOM05D005403 ORTHO05D006572 1.1e-33 146.4 84 83.3
SalBow8G2599 Salvia bowleyana HOM05D005403 ORTHO05D006572 1.1e-33 146.4 84 78.6
EL10Ac4g09116 Beta vulgaris HOM05D005403 ORTHO05D006572 1.5e-33 146.0 92 78.3
BcaB04g21347 Brassica carinata HOM05D005403 ORTHO05D006572 1.5e-33 146.0 84 83.3
BcaNung06422 Brassica carinata HOM05D005403 ORTHO05D006572 1.5e-33 146.0 84 83.3
PGR083G0704 Punica granatum HOM05D005403 ORTHO05D006572 1.5e-33 146.0 84 83.3
VMungo0720G0096 Vigna mungo HOM05D005403 ORTHO05D006572 1.5e-33 146.0 84 81.0
Aa31LG5G15180 Aethionema arabicum HOM05D005403 ORTHO05D006572 1.9e-33 145.6 84 82.1
AUR62001024 Chenopodium quinoa HOM05D005403 ORTHO05D006572 1.9e-33 145.6 84 82.1
Phvul.007G187000 Phaseolus vulgaris HOM05D005403 ORTHO05D006572 1.9e-33 145.6 84 81.0
A05p42780 Brassica napus HOM05D005403 ORTHO05D006572 2.5e-33 145.2 84 82.1
DCAR_027617 Daucus carota HOM05D005403 ORTHO05D006572 2.5e-33 145.2 84 82.1
Thhalv10021632m.g Eutrema salsugineum HOM05D005403 ORTHO05D006572 2.5e-33 145.2 84 82.1
Peaxi162Scf00282g00219 Petunia axillaris HOM05D005403 ORTHO05D006572 3.3e-33 144.8 84 81.0
Nn1g02427 Nelumbo nucifera HOM05D005403 ORTHO05D006572 4.3e-33 144.4 83 81.9
PSO210G2729 Papaver somniferum HOM05D005403 ORTHO05D006572 4.3e-33 144.4 85 85.9
Potri.005G052100 Populus trichocarpa HOM05D005403 ORTHO05D006572 4.3e-33 144.4 84 83.3
CAN.G134.109 Capsicum annuum HOM05D005403 ORTHO05D006572 5.6e-33 144.1 84 82.1
AUR62004927 Chenopodium quinoa HOM05D005403 ORTHO05D006572 5.6e-33 144.1 84 79.8
BNapus_Darmor_BZH_scaffold_78p01010 Brassica napus HOM05D005403 ORTHO05D006572 7.4e-33 143.7 84 81.0
BolC1t05726H Brassica oleracea HOM05D005403 ORTHO05D006572 7.4e-33 143.7 84 81.0
BraA01t04505Z Brassica rapa HOM05D005403 ORTHO05D006572 7.4e-33 143.7 84 81.0
Ciclev10002653m.g Citrus clementina HOM05D005403 ORTHO05D006572 7.4e-33 143.7 84 77.4
PSO832G0823 Papaver somniferum HOM05D005403 ORTHO05D006572 7.4e-33 143.7 85 84.7
Sc09g0003870 Simmondsia chinensis HOM05D005403 ORTHO05D006572 7.4e-33 143.7 84 82.1
BraA05t22974Z Brassica rapa HOM05D005403 ORTHO05D006572 1.3e-32 142.9 84 81.0
TPR.G30942 Trifolium pratense HOM05D005403 ORTHO05D006572 1.3e-32 142.9 85 78.8
Hma1.2p1_0332F.1_g127630 Hydrangea macrophylla HOM05D005403 ORTHO05D006572 1.6e-32 142.5 84 78.6
Atru.chr2.798 Acer truncatum HOM05D005403 ORTHO05D006572 2.1e-32 142.1 85 78.8
MBI11_g35357_MAGBIO Magnolia biondii HOM05D005403 ORTHO05D006572 2.8e-32 141.7 84 77.4
Medtr1g080960 Medicago truncatula HOM05D005403 ORTHO05D006572 2.8e-32 141.7 85 76.5
Potri.013G039500 Populus trichocarpa HOM05D005403 ORTHO05D006572 2.8e-32 141.7 84 79.8
unitig_21.g20052 Utricularia gibba HOM05D005403 ORTHO05D006572 2.8e-32 141.7 84 81.0
ECA232G3347 Erigeron canadensis HOM05D005403 ORTHO05D006572 3.7e-32 141.4 80 83.8
PGSC0003DMG400019449 Solanum tuberosum HOM05D005403 ORTHO05D006572 3.7e-32 141.4 84 81.0
Sabra05G0045800 Salix brachista HOM05D005403 ORTHO05D006572 4.8e-32 141.0 84 82.1
Sopen01g041120 Solanum pennellii HOM05D005403 ORTHO05D006572 1.1e-31 139.8 84 78.6
Sabra13G0036900 Salix brachista HOM05D005403 ORTHO05D006572 1.4e-31 139.4 84 79.8
Cfa006448 Carpinus fangiana HOM05D005403 ORTHO05D006572 1.8e-31 139.0 72 88.9
Solyc01g097450.3 Solanum lycopersicum HOM05D005403 ORTHO05D006572 2.4e-31 138.7 84 78.6
Aqoxy2G03453 Aquilegia oxysepala HOM05D005403 ORTHO05D006572 4.0e-31 137.9 84 78.6
ATR0665G176 Amborella trichopoda HOM05D005403 ORTHO05D006572 5.3e-31 137.5 79 81.0
Lalb_Chr02g0148771 Lupinus albus HOM05D005403 ORTHO05D006572 3.4e-30 134.8 86 75.6
HPP92_015625 Vanilla planifolia HOM05D005403 ORTHO05D006572 3.4e-30 134.8 80 77.5
COL.COLO4_15309 Corchorus olitorius HOM05D005403 ORTHO05D006572 1.3e-29 132.9 73 83.6
Lalb_Chr06g0168031 Lupinus albus HOM05D005403 ORTHO05D006572 1.3e-29 132.9 86 76.7
CAN.G141.8 Capsicum annuum HOM05D005403 ORTHO05D006572 2.9e-29 131.7 80 78.8
Gohir.A11G253700 Gossypium hirsutum HOM05D005403 ORTHO05D006572 4.9e-29 131.0 71 83.1
Sed0002619 Sechium edule HOM05D005403 ORTHO05D006572 1.9e-28 129.0 84 71.4
MELO3C004371.2 Cucumis melo HOM05D005403 ORTHO05D006572 2.1e-27 125.6 84 71.4
ClCG02G016540 Citrullus lanatus HOM05D005403 ORTHO05D006572 2.7e-27 125.2 84 71.4
SEGI_41475 Sequoiadendron giganteum HOM05D005403 ORTHO05D006572 6.0e-27 124.0 77 72.7
Os03g0795500 Oryza sativa ssp. japonica HOM05D005403 ORTHO05D006572 1.3e-26 122.9 76 73.7
CDE06G0313 Ceratophyllum demersum HOM05D005403 ORTHO05D006572 1.8e-26 122.5 84 70.2
Zm00001eb213000 Zea mays HOM05D005403 ORTHO05D006572 1.8e-26 122.5 76 72.4
Sed0000415 Sechium edule HOM05D005403 ORTHO05D006572 3.9e-26 121.3 84 70.2
CsaV3_2G004230 Cucumis sativus L. HOM05D005403 ORTHO05D006572 1.1e-25 119.8 77 74.0
CDE07G0028 Ceratophyllum demersum HOM05D005403 ORTHO05D006572 4.3e-25 117.9 84 67.9
Rhsim10G0108600 Rhododendron simsii HOM05D005403 ORTHO05D006572 6.2e-24 114.0 150 45.3
Pp3c5_6010 Physcomitrium patens HOM05D005403 ORTHO05D006572 3.1e-23 111.7 72 69.4
AagrBONN_evm.TU.Sc2ySwM_344.2056 Anthoceros agrestis HOM05D005403 ORTHO05D006572 2.0e-22 109.0 71 66.2
Mapoly0034s0051 Marchantia polymorpha HOM05D005403 ORTHO05D006572 2.0e-22 109.0 74 64.9
Psat6g146440 Pisum sativum HOM05D005403 ORTHO05D006572 2.6e-22 108.6 84 63.1
CBR_g8269 Chara braunii HOM05D005403 ORTHO05D006572 5.8e-22 107.5 76 67.1
Gohir.D11G263600 Gossypium hirsutum HOM05D005403 ORTHO05D006572 5.8e-22 107.5 83 63.9
SMO340G0197 Selaginella moellendorffii HOM05D005403 ORTHO05D006572 1.7e-21 105.9 70 67.1
Sopen04g005140 Solanum pennellii HOM05D005403 ORTHO05D006572 1.1e-17 93.2 73 60.3
vmacro05240 Vaccinium macrocarpon HOM05D005403 ORTHO05D006572 1.5e-17 92.8 200 33.5
Solyc04g010010.3 Solanum lycopersicum HOM05D005403 ORTHO05D006572 4.3e-17 91.3 80 56.2
Pp3c6_27050 Physcomitrium patens HOM05D005403 ORTHO05D006572 1.3e-16 89.7 106 45.3
PGSC0003DMG400011476 Solanum tuberosum HOM05D005403 ORTHO05D006572 2.8e-16 88.6 72 58.3
PRCOL_00004155 Prasinoderma coloniale HOM05D005403 ORTHO05D006572 1.4e-15 86.3 66 59.1
Solyc04g010030.1 Solanum lycopersicum HOM05D005403 ORTHO05D006572 5.3e-15 84.3 72 59.7
Sopen04g005160 Solanum pennellii HOM05D005403 ORTHO05D006572 5.3e-15 84.3 72 59.7
Cre17.g730250 Chlamydomonas reinhardtii HOM05D005403 ORTHO05D006572 3.4e-14 81.6 68 54.4
Lj7A489G21 Lonicera japonica HOM05D005403 ORTHO05D006572 1.0e-13 80.1 43 86.0
Gorai.007G283600 Gossypium raimondii HOM05D005403 ORTHO05D006572 1.4e-12 76.3 46 73.9
MCO08G264 Micromonas commoda HOM05D005403 ORTHO05D006572 4.2e-12 74.7 67 50.7
Cc02_g31890 Coffea canephora HOM05D005403 ORTHO05D006572 1.2e-11 73.2 42 76.2
Zm00001eb060640 Zea mays HOM05D005403 ORTHO05D006572 6.1e-11 70.9 76 48.7
CSS0036106 Camellia sinensis var. sinensis HOM05D005403 ORTHO05D006572 3.3e-09 65.1 43 67.4
Haze_27143 Corylus avellana HOM05D005403 ORTHO05D006572 3.7e-08 61.6 80 41.2
DCAR_011699 Daucus carota HOM05D005403 ORTHO05D006572 1.8e-07 59.3 38 65.8
Pp3s396_10 Physcomitrium patens HOM05D050862 ORTHO05D006572 1.5e-06 56.2 73 38.4


User provided reference genes

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