Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p024856 Quercus lobata HOM05D004556 ORTHO05D005298 8.6e-168 593.6 302 100.0
Thecc.05G287400 Theobroma cacao HOM05D004556 ORTHO05D005298 5.1e-152 541.2 300 89.7
CiPaw.07G064700 Carya illinoinensis HOM05D004556 ORTHO05D005298 2.5e-151 538.9 302 89.4
Prupe.6G340800 Prunus persica HOM05D004556 ORTHO05D005298 1.1e-149 533.5 302 88.7
Duzib106G0883 Durio zibethinus HOM05D004556 ORTHO05D005298 1.4e-149 533.1 300 87.7
Gohir.D08G231400 Gossypium hirsutum HOM05D004556 ORTHO05D005298 4.0e-149 531.6 300 87.3
Duzib177G0375 Durio zibethinus HOM05D004556 ORTHO05D005298 6.9e-149 530.8 316 83.9
Gohir.A08G214400 Gossypium hirsutum HOM05D004556 ORTHO05D005298 9.0e-149 530.4 300 87.3
Duzib128G0953 Durio zibethinus HOM05D004556 ORTHO05D005298 1.2e-148 530.0 300 87.0
Gorai.004G245800 Gossypium raimondii HOM05D004556 ORTHO05D005298 1.2e-148 530.0 300 87.3
COL.COLO4_15298 Corchorus olitorius HOM05D004556 ORTHO05D005298 1.5e-148 529.6 300 86.7
Gorai.007G284100 Gossypium raimondii HOM05D004556 ORTHO05D005298 4.5e-148 528.1 300 86.0
GSVIVG01021835001 Vitis vinifera HOM05D004556 ORTHO05D005298 4.5e-148 528.1 300 87.0
Gohir.D11G264100 Gossypium hirsutum HOM05D004556 ORTHO05D005298 1.7e-147 526.2 300 85.7
Dinv17770 Davidia involucrata HOM05D004556 ORTHO05D005298 8.4e-147 523.9 302 85.8
MD12G1237600 Malus domestica HOM05D004556 ORTHO05D005298 1.4e-146 523.1 302 87.1
TWI56G0949 Tripterygium wilfordii HOM05D004556 ORTHO05D005298 3.2e-146 521.9 301 85.4
Ciclev10001991m.g Citrus clementina HOM05D004556 ORTHO05D005298 3.5e-145 518.5 301 85.0
Dinv11531 Davidia involucrata HOM05D004556 ORTHO05D005298 4.6e-145 518.1 300 86.0
MD04G1221600 Malus domestica HOM05D004556 ORTHO05D005298 7.9e-145 517.3 302 86.8
Potri.005G051300 Populus trichocarpa HOM05D004556 ORTHO05D005298 7.9e-145 517.3 302 83.4
Sabra13G0036200 Salix brachista HOM05D004556 ORTHO05D005298 7.9e-145 517.3 302 85.1
Cfa006453 Carpinus fangiana HOM05D004556 ORTHO05D005298 5.1e-144 514.6 301 86.4
CSS0028825 Camellia sinensis var. sinensis HOM05D004556 ORTHO05D005298 6.7e-144 514.2 302 84.8
FAN02G1055 Fragaria x ananassa HOM05D004556 ORTHO05D005298 1.5e-143 513.1 302 85.4
Potri.013G038700 Populus trichocarpa HOM05D004556 ORTHO05D005298 1.9e-143 512.7 302 83.1
FvH4_6g03340 Fragaria vesca HOM05D004556 ORTHO05D005298 3.3e-143 511.9 302 84.1
Glyma.03G245800 Glycine max HOM05D004556 ORTHO05D005298 3.3e-143 511.9 302 83.8
Lalb_Chr15g0076861 Lupinus albus HOM05D004556 ORTHO05D005298 4.3e-143 511.5 302 84.1
VMungo0540G1874 Vigna mungo HOM05D004556 ORTHO05D005298 5.6e-143 511.1 302 83.8
TPR.G6984 Trifolium pratense HOM05D004556 ORTHO05D005298 9.6e-143 510.4 302 83.4
Hma1.2p1_0083F.1_g042880 Hydrangea macrophylla HOM05D004556 ORTHO05D005298 1.3e-142 510.0 302 84.1
RcHm_v2.0_Chr3g0451841 Rosa chinensis HOM05D004556 ORTHO05D005298 2.1e-142 509.2 302 84.1
ClCG02G016480 Citrullus lanatus HOM05D004556 ORTHO05D005298 3.7e-142 508.4 301 81.7
PGSC0003DMG400022512 Solanum tuberosum HOM05D004556 ORTHO05D005298 3.7e-142 508.4 300 81.7
Ca_09410_v3 Cicer arietinum L. HOM05D004556 ORTHO05D005298 4.8e-142 508.1 302 82.8
FAN05G0551 Fragaria x ananassa HOM05D004556 ORTHO05D005298 4.8e-142 508.1 299 84.6
Manes.09G154700 Manihot esculenta HOM05D004556 ORTHO05D005298 4.8e-142 508.1 302 83.4
arahy.Tifrunner.gnm1.ann1.SCJ0TV Arachis hypogaea HOM05D004556 ORTHO05D005298 8.1e-142 507.3 302 82.5
CsaV3_2G004290 Cucumis sativus L. HOM05D004556 ORTHO05D005298 1.8e-141 506.1 302 81.5
TAR362G0361 Trochodendron aralioides HOM05D004556 ORTHO05D005298 2.4e-141 505.8 302 82.8
FAN05G3160 Fragaria x ananassa HOM05D004556 ORTHO05D005298 3.1e-141 505.4 296 84.8
PGR083G2383 Punica granatum HOM05D004556 ORTHO05D005298 3.1e-141 505.4 302 82.1
arahy.Tifrunner.gnm1.ann1.ZA55QJ Arachis hypogaea HOM05D004556 ORTHO05D005298 4.0e-141 505.0 302 82.1
Phvul.006G100100 Phaseolus vulgaris HOM05D004556 ORTHO05D005298 4.0e-141 505.0 302 82.8
MELO3C004366.2 Cucumis melo HOM05D004556 ORTHO05D005298 5.3e-141 504.6 302 81.1
TAR365G0624 Trochodendron aralioides HOM05D004556 ORTHO05D005298 5.3e-141 504.6 302 82.5
CANSAT54G0892 Cannabis sativa HOM05D004556 ORTHO05D005298 6.9e-141 504.2 302 85.1
Medtr7g114810 Medicago truncatula HOM05D004556 ORTHO05D005298 6.9e-141 504.2 302 83.1
Sopen01g041350 Solanum pennellii HOM05D004556 ORTHO05D005298 1.2e-140 503.4 300 80.7
Sed0015548 Sechium edule HOM05D004556 ORTHO05D005298 1.5e-140 503.1 301 81.1
Cpa.g.sc117.71 Carica papaya HOM05D004556 ORTHO05D005298 2.0e-140 502.7 302 82.5
FAN14G0561 Fragaria x ananassa HOM05D004556 ORTHO05D005298 2.0e-140 502.7 299 83.6
Glyma.19G243300 Glycine max HOM05D004556 ORTHO05D005298 2.0e-140 502.7 302 82.8
THA.LOC104818641 Tarenaya hassleriana HOM05D004556 ORTHO05D005298 2.6e-140 502.3 302 81.8
Eucgr.B01695 Eucalyptus grandis HOM05D004556 ORTHO05D005298 5.8e-140 501.1 302 82.1
Lalb_Chr18g0045051 Lupinus albus HOM05D004556 ORTHO05D005298 5.8e-140 501.1 302 82.5
CSS0008105 Camellia sinensis var. sinensis HOM05D004556 ORTHO05D005298 7.6e-140 500.7 302 83.4
Aqoxy5G00420 Aquilegia oxysepala HOM05D004556 ORTHO05D005298 2.9e-139 498.8 301 81.7
Cc02_g31820 Coffea canephora HOM05D004556 ORTHO05D005298 2.9e-139 498.8 301 82.4
CAN.G134.134 Capsicum annuum HOM05D004556 ORTHO05D005298 3.8e-139 498.4 300 80.0
Nitab4.5_0005441g0010 Nicotiana tabacum HOM05D004556 ORTHO05D005298 3.8e-139 498.4 300 80.7
Peaxi162Scf01049g00037 Petunia axillaris HOM05D004556 ORTHO05D005298 4.9e-139 498.0 300 81.0
Sed0026396 Sechium edule HOM05D004556 ORTHO05D005298 4.9e-139 498.0 301 80.4
Atru.chr2.783 Acer truncatum HOM05D004556 ORTHO05D005298 8.4e-139 497.3 301 80.7
Actinidia05768 Actinidia chinensis HOM05D004556 ORTHO05D005298 1.1e-138 496.9 301 83.1
BcaB04g19297 Brassica carinata HOM05D004556 ORTHO05D005298 1.1e-138 496.9 303 82.2
AL3G14990 Arabidopsis lyrata HOM05D004556 ORTHO05D005298 1.9e-138 496.1 303 81.8
Carub.0003s0402 Capsella rubella HOM05D004556 ORTHO05D005298 1.9e-138 496.1 304 81.6
EL10Ac8g19247 Beta vulgaris HOM05D004556 ORTHO05D005298 2.5e-138 495.7 302 79.5
Rhsim05G0160800 Rhododendron simsii HOM05D004556 ORTHO05D005298 2.5e-138 495.7 302 82.8
A03p33860 Brassica napus HOM05D004556 ORTHO05D005298 3.2e-138 495.4 302 82.1
BraA03t12560Z Brassica rapa HOM05D004556 ORTHO05D005298 3.2e-138 495.4 302 82.1
AT3G04830 Arabidopsis thaliana HOM05D004556 ORTHO05D005298 4.2e-138 495.0 303 81.8
Hund22124 Selenicereus undatus HOM05D004556 ORTHO05D005298 9.3e-138 493.8 300 81.0
Lj1g0006589 Lotus japonicus HOM05D004556 ORTHO05D005298 1.6e-137 493.0 302 80.8
Sp3g03660 Schrenkiella parvula HOM05D004556 ORTHO05D005298 1.6e-137 493.0 303 81.2
BcaC01g04346 Brassica carinata HOM05D004556 ORTHO05D005298 2.1e-137 492.7 302 81.8
Thhalv10021217m.g Eutrema salsugineum HOM05D004556 ORTHO05D005298 2.1e-137 492.7 303 80.5
BolC3t16405H Brassica oleracea HOM05D004556 ORTHO05D005298 3.5e-137 491.9 302 81.5
MSTRG.5093 Avicennia marina HOM05D004556 ORTHO05D005298 1.3e-136 490.0 299 80.6
BolC5t34901H Brassica oleracea HOM05D004556 ORTHO05D005298 2.3e-136 489.2 303 80.9
HanXRQChr08g0230031 Helianthus annuus HOM05D004556 ORTHO05D005298 2.3e-136 489.2 300 80.3
Lsat_1_v5_gn_1_96700 Lactuca sativa HOM05D004556 ORTHO05D005298 3.0e-136 488.8 300 80.3
PSO210G7536 Papaver somniferum HOM05D004556 ORTHO05D005298 3.0e-136 488.8 300 80.3
SalBow4G3027 Salvia bowleyana HOM05D004556 ORTHO05D005298 3.0e-136 488.8 302 80.8
SGA_v2.0_scaffold196G40974 Striga asiatica HOM05D004556 ORTHO05D005298 3.0e-136 488.8 302 81.1
C03p41170 Brassica napus HOM05D004556 ORTHO05D005298 5.1e-136 488.0 303 81.5
PSO832G3279 Papaver somniferum HOM05D004556 ORTHO05D005298 1.9e-135 486.1 300 79.7
SGA_v2.0_scaffold43G16266 Striga asiatica HOM05D004556 ORTHO05D005298 3.3e-135 485.3 300 81.3
C05p62480 Brassica napus HOM05D004556 ORTHO05D005298 9.6e-135 483.8 303 80.2
unitig_0.g2302 Utricularia gibba HOM05D004556 ORTHO05D005298 9.6e-135 483.8 302 78.1
DCAR_029537 Daucus carota HOM05D004556 ORTHO05D005298 1.6e-134 483.0 302 79.1
AUR62034008 Chenopodium quinoa HOM05D004556 ORTHO05D005298 3.7e-134 481.9 299 78.6
ECA232G2012 Erigeron canadensis HOM05D004556 ORTHO05D005298 6.2e-134 481.1 299 79.9
Sc09g0003820 Simmondsia chinensis HOM05D004556 ORTHO05D005298 1.8e-133 479.6 302 78.8
AUR62027473 Chenopodium quinoa HOM05D004556 ORTHO05D005298 4.1e-133 478.4 300 77.7
ATR0665G084 Amborella trichopoda HOM05D004556 ORTHO05D005298 5.3e-133 478.0 300 77.7
vmacro21412 Vaccinium macrocarpon HOM05D004556 ORTHO05D005298 6.9e-133 477.6 321 75.7
BraA05t22977Z Brassica rapa HOM05D004556 ORTHO05D005298 9.0e-133 477.2 303 79.5
Carub.0006s2567 Capsella rubella HOM05D004556 ORTHO05D005298 1.5e-132 476.5 303 76.9
AL6G40460 Arabidopsis lyrata HOM05D004556 ORTHO05D005298 2.6e-132 475.7 303 76.2
Aa31LG5G15220 Aethionema arabicum HOM05D004556 ORTHO05D005298 1.3e-131 473.4 316 75.6
Sabra05G0045300 Salix brachista HOM05D004556 ORTHO05D005298 1.3e-131 473.4 340 71.5
A05p42760 Brassica napus HOM05D004556 ORTHO05D005298 2.9e-131 472.2 303 78.9
AT5G28220 Arabidopsis thaliana HOM05D004556 ORTHO05D005298 1.9e-130 469.5 302 76.5
MBI11_g10323_MAGBIO Magnolia biondii HOM05D004556 ORTHO05D005298 5.5e-130 468.0 308 76.9
Ah.14g085270 Amaranthus hybridus HOM05D004556 ORTHO05D005298 1.2e-129 466.8 291 78.0
SalBow4G2463 Salvia bowleyana HOM05D004556 ORTHO05D005298 1.2e-129 466.8 337 72.7
HPP92_025859 Vanilla planifolia HOM05D004556 ORTHO05D005298 2.7e-129 465.7 302 76.2
Thhalv10004492m.g Eutrema salsugineum HOM05D004556 ORTHO05D005298 3.5e-129 465.3 303 75.9
Nitab4.5_0005729g0050 Nicotiana tabacum HOM05D004556 ORTHO05D005298 8.7e-128 460.7 301 76.1
CDE10G0245 Ceratophyllum demersum HOM05D004556 ORTHO05D005298 4.1e-125 451.8 302 74.2
Manes.08G132100 Manihot esculenta HOM05D004556 ORTHO05D005298 1.0e-123 447.2 249 88.0
Dinv00306 Davidia involucrata HOM05D004556 ORTHO05D005298 8.5e-123 444.1 248 87.9
Solyc01g097740.3 Solanum lycopersicum HOM05D004556 ORTHO05D005298 8.5e-123 444.1 259 82.6
TWI12G0865 Tripterygium wilfordii HOM05D004556 ORTHO05D005298 1.1e-119 433.7 301 74.1
SEGI_22763 Sequoiadendron giganteum HOM05D004556 ORTHO05D005298 4.1e-117 425.2 302 66.9
Os02g0127000 Oryza sativa ssp. japonica HOM05D004556 ORTHO05D005298 2.0e-116 422.9 293 69.3
Oeu045907.1 Olea europaea HOM05D004556 ORTHO05D005298 1.7e-115 419.9 311 71.1
SHI18353 Sapria himalayana HOM05D004556 ORTHO05D005298 1.7e-115 419.9 340 63.5
HanXRQChr11g0340961 Helianthus annuus HOM05D004556 ORTHO05D005298 3.8e-115 418.7 300 71.0
Zm00001eb210860 Zea mays HOM05D004556 ORTHO05D005298 1.6e-113 413.3 293 68.3
Zm00001eb064390 Zea mays HOM05D004556 ORTHO05D005298 3.0e-112 409.1 288 69.1
Nn1g02409 Nelumbo nucifera HOM05D004556 ORTHO05D005298 4.8e-110 401.7 302 68.5
Pp3c22_11510 Physcomitrium patens HOM05D004556 ORTHO05D005298 4.2e-106 388.7 299 64.5
Gohir.A11G254300 Gossypium hirsutum HOM05D004556 ORTHO05D005298 2.1e-105 386.3 300 68.0
vmacro21326 Vaccinium macrocarpon HOM05D004556 ORTHO05D005298 3.7e-102 375.6 509 45.2
Psat3g008080 Pisum sativum HOM05D004556 ORTHO05D005298 1.8e-101 373.2 209 86.1
Mapoly0010s0190 Marchantia polymorpha HOM05D004556 ORTHO05D005298 7.0e-101 371.3 298 63.8
THA.LOC104821680 Tarenaya hassleriana HOM05D004556 ORTHO05D005298 2.0e-100 369.8 209 85.2
Haze_04338 Corylus avellana HOM05D004556 ORTHO05D005298 3.0e-96 355.9 200 89.5
SMO351G0459 Selaginella moellendorffii HOM05D004556 ORTHO05D005298 8.8e-96 354.4 290 59.3
CARHR079090 Cardamine hirsuta HOM05D004556 ORTHO05D005298 1.7e-94 350.1 220 79.5
Lj9C665G12 Lonicera japonica HOM05D004556 ORTHO05D005298 2.9e-83 312.8 241 69.7
AagrBONN_evm.TU.Sc2ySwM_228.926 Anthoceros agrestis HOM05D004556 ORTHO05D005298 8.3e-78 294.7 246 59.3
CBR_g2743 Chara braunii HOM05D004556 ORTHO05D005298 2.7e-76 289.7 298 51.3
Rhsim05G0161200 Rhododendron simsii HOM05D004556 ORTHO05D005298 1.0e-75 287.7 244 65.2
Actinidia30934 Actinidia chinensis HOM05D004556 ORTHO05D005298 2.3e-67 260.0 154 87.0
PRCOL_00003723 Prasinoderma coloniale HOM05D004556 ORTHO05D005298 4.1e-53 212.6 281 42.3
Cre13.g579950 Chlamydomonas reinhardtii HOM05D004556 ORTHO05D005298 9.6e-50 201.4 298 39.6
TAR636G2079 Trochodendron aralioides HOM05D001851 ORTHO05D002237 3.1e-48 196.4 108 87.0
AagrBONN_evm.TU.Sc2ySwM_228.922 Anthoceros agrestis HOM05D004556 ORTHO05D005298 1.7e-46 190.7 148 61.5
Migut.O00800 Erythranthe guttata HOM05D004556 ORTHO05D005298 8.1e-41 171.8 101 81.2
Lj9C668G11 Lonicera japonica HOM05D004556 ORTHO05D005298 3.8e-38 162.9 198 50.0
Potri.013G038501 Populus trichocarpa HOM05D004556 ORTHO05D005298 2.5e-34 150.2 84 84.5
CARHR079080 Cardamine hirsuta HOM05D004556 ORTHO05D005298 1.1e-32 144.8 84 82.1
MCO08G289 Micromonas commoda HOM05D004556 ORTHO05D005298 2.8e-25 120.2 237 30.4
BolC3t16406H Brassica oleracea HOM05D004556 ORTHO05D005298 4.5e-23 112.8 83 68.7
RcHm_v2.0_Chr6g0244381 Rosa chinensis HOM05D004556 ORTHO05D005298 1.0e-22 111.7 87 70.1
Lj9C665T13 Lonicera japonica HOM05D004556 ORTHO05D005298 2.9e-22 110.2 70 75.7
CBR_g57838 Chara braunii HOM05D006582 ORTHO05D008313 4.9e-22 109.4 151 41.1
HanXRQChr13g0394071 Helianthus annuus HOM05D004556 ORTHO05D005298 2.1e-20 104.0 63 74.6
TPR.G31876 Trifolium pratense HOM05D004556 ORTHO05D005298 2.7e-20 103.6 86 65.1
AagrBONN_evm.TU.Sc2ySwM_228.821 Anthoceros agrestis HOM05D004556 ORTHO05D005298 4.6e-20 102.8 161 40.4
RcHm_v2.0_Chr5g0051541 Rosa chinensis HOM05D004556 ORTHO05D005298 1.3e-17 94.7 121 48.8
BcaB04g19294 Brassica carinata HOM05D004556 ORTHO05D005298 4.8e-09 66.2 54 64.8
Sp1g08890 Schrenkiella parvula HOM05D000111 ORTHO05D013786 5.3e-08 62.8 63 57.1
Lj9A668T37 Lonicera japonica HOM05D004556 ORTHO05D005298 3.4e-07 60.1 42 66.7
RcHm_v2.0_Chr7g0229041 Rosa chinensis HOM05D004556 ORTHO05D005298 3.4e-07 60.1 40 70.0


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