Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p024758 Quercus lobata HOM05D009728 ORTHO05D011965 3.1e-111 405.2 212 100.0
QL03p024609 Quercus lobata HOM05D009728 ORTHO05D011965 3.6e-96 355.1 212 90.6
Ciclev10002536m.g Citrus clementina HOM05D009728 ORTHO05D011965 2.0e-41 173.3 216 51.4
Manes.08G128200 Manihot esculenta HOM05D009728 ORTHO05D011965 3.1e-39 166.0 213 47.9
Manes.09G155500 Manihot esculenta HOM05D009728 ORTHO05D011965 1.9e-36 156.8 217 46.5
TWI12G0190 Tripterygium wilfordii HOM05D009728 ORTHO05D011965 1.2e-35 154.1 223 48.0
Eucgr.L02102 Eucalyptus grandis HOM05D009728 ORTHO05D011965 3.0e-34 149.4 199 47.7
Gohir.D08G231300 Gossypium hirsutum HOM05D009728 ORTHO05D011965 9.7e-33 144.4 218 42.7
Gorai.004G245700 Gossypium raimondii HOM05D009728 ORTHO05D011965 1.3e-32 144.1 218 42.7
GSVIVG01021841001 Vitis vinifera HOM05D009728 ORTHO05D011965 9.1e-31 137.9 162 53.7
Duzib106G1249 Durio zibethinus HOM05D009728 ORTHO05D011965 1.2e-30 137.5 221 43.9
Gohir.A08G214300 Gossypium hirsutum HOM05D009728 ORTHO05D011965 1.6e-30 137.1 218 40.8
Sabra13G0035900 Salix brachista HOM05D009728 ORTHO05D011965 1.6e-30 137.1 215 45.6
PGR004G2732 Punica granatum HOM05D009728 ORTHO05D011965 2.7e-30 136.3 221 44.3
Prupe.6G340300 Prunus persica HOM05D009728 ORTHO05D011965 1.0e-26 124.4 132 56.1
Thecc.05G288100 Theobroma cacao HOM05D009728 ORTHO05D011965 1.4e-26 124.0 157 48.4
Potri.013G037900 Populus trichocarpa HOM05D009728 ORTHO05D011965 2.0e-25 120.2 168 47.6
TAR362G0291 Trochodendron aralioides HOM05D009728 ORTHO05D011965 7.5e-25 118.2 145 49.7
COL.COLO4_15288 Corchorus olitorius HOM05D009728 ORTHO05D011965 1.3e-24 117.5 229 38.9
arahy.Tifrunner.gnm1.ann1.UKXE3V Arachis hypogaea HOM05D009728 ORTHO05D011965 3.1e-23 112.8 209 41.1
arahy.Tifrunner.gnm1.ann1.06AVZ6 Arachis hypogaea HOM05D009728 ORTHO05D011965 1.6e-22 110.5 204 41.7
Dinv11539 Davidia involucrata HOM05D009728 ORTHO05D011965 2.2e-16 90.1 68 66.2
Nn1g02325 Nelumbo nucifera HOM05D009728 ORTHO05D011965 2.4e-15 86.7 120 42.5
Potri.005G050800 Populus trichocarpa HOM05D009728 ORTHO05D011965 1.5e-12 77.4 69 58.0
TAR362G0346 Trochodendron aralioides HOM05D009728 ORTHO05D414740 4.0e-10 69.3 111 43.2
Cpa.g.sc117.68 Carica papaya HOM05D009728 ORTHO05D011965 3.4e-09 66.2 115 47.0
Mapoly0004s0228 Marchantia polymorpha HOM05D002614 ORTHO05D002794 3.7e-08 62.8 135 34.1


User provided reference genes

Program Settings