Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p024077 Quercus lobata HOM05D000358 ORTHO05D337207 3.2e-63 245.0 130 100.0
QL03p024150 Quercus lobata HOM05D000358 ORTHO05D000004 1.7e-35 152.9 193 52.8
QL03p024480 Quercus lobata HOM05D000358 ORTHO05D010243 1.2e-22 110.2 79 73.4
QL03p024487 Quercus lobata HOM05D000358 ORTHO05D010243 1.2e-22 110.2 79 72.2
Cfa006464 Carpinus fangiana HOM05D000358 ORTHO05D010243 1.5e-20 103.2 76 71.1
Haze_04328 Corylus avellana HOM05D000358 ORTHO05D010243 1.5e-20 103.2 76 71.1
CiPaw.07G006500 Carya illinoinensis HOM05D000358 ORTHO05D010243 1.7e-19 99.8 80 68.8
CiPaw.08G179400 Carya illinoinensis HOM05D000358 ORTHO05D010243 6.4e-19 97.8 59 78.0
Atru.chr2.730 Acer truncatum HOM05D000358 ORTHO05D010243 5.4e-18 94.7 59 72.9
Cpa.g.sc117.64 Carica papaya HOM05D000358 ORTHO05D010243 5.4e-18 94.7 57 78.9
Duzib128G1761 Durio zibethinus HOM05D000358 ORTHO05D010243 7.1e-18 94.4 60 76.7
FAN02G0108 Fragaria x ananassa HOM05D000358 ORTHO05D010243 9.2e-18 94.0 78 60.3
FvH4_6g03450 Fragaria vesca HOM05D000358 ORTHO05D010243 1.2e-17 93.6 76 61.8
FAN09G2792 Fragaria x ananassa HOM05D000358 ORTHO05D010243 1.2e-17 93.6 76 61.8
FAN14G3100 Fragaria x ananassa HOM05D000358 ORTHO05D010243 1.2e-17 93.6 76 61.8
Prupe.6G339700 Prunus persica HOM05D000358 ORTHO05D010243 1.2e-17 93.6 79 59.5
Thecc.05G288600 Theobroma cacao HOM05D000358 ORTHO05D010243 1.2e-17 93.6 55 80.0
Duzib177G1055 Durio zibethinus HOM05D000358 ORTHO05D010243 3.5e-17 92.0 60 75.0
MD04G1220700 Malus domestica HOM05D000358 ORTHO05D010243 4.6e-17 91.7 79 58.2
Dinv11555 Davidia involucrata HOM05D000358 ORTHO05D010243 6.0e-17 91.3 79 58.2
FAN05G0124 Fragaria x ananassa HOM05D000358 ORTHO05D010243 7.8e-17 90.9 76 60.5
TAR365G0142 Trochodendron aralioides HOM05D000358 ORTHO05D010243 7.8e-17 90.9 76 59.2
FAN05G0041 Fragaria x ananassa HOM05D000358 ORTHO05D010243 1.3e-16 90.1 76 60.5
Aqoxy5G00477 Aquilegia oxysepala HOM05D000358 ORTHO05D010243 1.7e-16 89.7 53 77.4
Hma1.2p1_0332F.1_g127670 Hydrangea macrophylla HOM05D000358 ORTHO05D010243 2.3e-16 89.4 59 67.8
Potri.013G036400 Populus trichocarpa HOM05D000358 ORTHO05D010243 3.0e-16 89.0 80 61.2
Gohir.A11G255300 Gossypium hirsutum HOM05D000358 ORTHO05D010243 3.9e-16 88.6 60 71.7
Gohir.D11G265000 Gossypium hirsutum HOM05D000358 ORTHO05D010243 5.1e-16 88.2 60 71.7
CANSAT54G3035 Cannabis sativa HOM05D000358 ORTHO05D010243 6.6e-16 87.8 72 63.9
Ciclev10001704m.g Citrus clementina HOM05D000358 ORTHO05D010243 8.7e-16 87.4 60 71.7
Potri.005G050000 Populus trichocarpa HOM05D000358 ORTHO05D010243 8.7e-16 87.4 57 75.4
MD12G1237000 Malus domestica HOM05D000358 ORTHO05D010243 1.9e-15 86.3 76 57.9
Gorai.007G285100 Gossypium raimondii HOM05D000358 ORTHO05D010243 2.5e-15 85.9 60 70.0
CSS0042359 Camellia sinensis var. sinensis HOM05D000358 ORTHO05D010243 5.6e-15 84.7 52 73.1
Sc20g0000260 Simmondsia chinensis HOM05D000358 ORTHO05D010243 1.6e-14 83.2 74 56.8
Sabra13G0035500 Salix brachista HOM05D000358 ORTHO05D010243 2.1e-14 82.8 53 73.6
Manes.09G156100 Manihot esculenta HOM05D000358 ORTHO05D010243 2.8e-14 82.4 81 54.3
Lj9A670T64 Lonicera japonica HOM05D000358 ORTHO05D010243 1.4e-13 80.1 71 56.3
Glyma.03G245600 Glycine max HOM05D000358 ORTHO05D010243 1.8e-13 79.7 53 73.6
Nn1g02299 Nelumbo nucifera HOM05D000358 ORTHO05D010243 2.4e-13 79.3 53 69.8
MBI04_g20813_MAGBIO Magnolia biondii HOM05D000358 ORTHO05D010243 3.1e-13 79.0 76 51.3
Glyma.19G243100 Glycine max HOM05D000358 ORTHO05D010243 4.0e-13 78.6 53 71.7
Lj9A666T49 Lonicera japonica HOM05D000358 ORTHO05D010243 4.0e-13 78.6 84 52.4
CAN.G134.167 Capsicum annuum HOM05D000358 ORTHO05D010243 5.3e-13 78.2 71 57.7
PSO210G4654 Papaver somniferum HOM05D000358 ORTHO05D010243 5.3e-13 78.2 73 54.8
Peaxi162Scf00404g00003 Petunia axillaris HOM05D000358 ORTHO05D010243 5.3e-13 78.2 71 56.3
Nitab4.5_0002361g0080 Nicotiana tabacum HOM05D000358 ORTHO05D010243 6.9e-13 77.8 73 56.2
arahy.Tifrunner.gnm1.ann1.QI99PU Arachis hypogaea HOM05D000358 ORTHO05D010243 1.5e-12 76.6 53 66.0
PSO761G0071 Papaver somniferum HOM05D000358 ORTHO05D010243 1.5e-12 76.6 73 53.4
Solyc01g097830.2 Solanum lycopersicum HOM05D000358 ORTHO05D010243 1.5e-12 76.6 71 56.3
PGSC0003DMG400039443 Solanum tuberosum HOM05D000358 ORTHO05D010243 1.5e-12 76.6 71 56.3
Rhsim05G0160600 Rhododendron simsii HOM05D000358 ORTHO05D010243 2.0e-12 76.3 73 56.2
Sopen01g041430 Solanum pennellii HOM05D000358 ORTHO05D010243 2.0e-12 76.3 71 56.3
AUR62004987 Chenopodium quinoa HOM05D000358 ORTHO05D010243 2.6e-12 75.9 119 40.3
Nn4g26308 Nelumbo nucifera HOM05D000358 ORTHO05D010243 2.6e-12 75.9 80 53.8
Phvul.006G099900 Phaseolus vulgaris HOM05D000358 ORTHO05D010243 2.6e-12 75.9 60 65.0
Lj1g0027335 Lotus japonicus HOM05D000358 ORTHO05D010243 4.4e-12 75.1 52 67.3
Sed0009364 Sechium edule HOM05D000358 ORTHO05D010243 1.7e-11 73.2 54 66.7
VMungo0540G0996 Vigna mungo HOM05D000358 ORTHO05D010243 2.9e-11 72.4 75 57.3
AUR62000978 Chenopodium quinoa HOM05D000358 ORTHO05D010243 1.1e-10 70.5 53 62.3
ClCG02G016430 Citrullus lanatus HOM05D000358 ORTHO05D010243 3.2e-10 68.9 51 68.6
MELO3C004362.2 Cucumis melo HOM05D000358 ORTHO05D010243 9.3e-10 67.4 52 65.4
CsaV3_2G004320 Cucumis sativus L. HOM05D000358 ORTHO05D010243 9.3e-10 67.4 52 65.4
Ah.06g192630 Amaranthus hybridus HOM05D000358 ORTHO05D010243 1.2e-09 67.0 53 58.5
Glyma.10G160700 Glycine max HOM05D000358 ORTHO05D010243 1.6e-09 66.6 86 44.2
Phvul.007G186200 Phaseolus vulgaris HOM05D000358 ORTHO05D010243 2.7e-09 65.9 86 44.2
VMungo0720G2909 Vigna mungo HOM05D000358 ORTHO05D010243 2.7e-09 65.9 86 45.3
EL10Ac4g09181 Beta vulgaris HOM05D000358 ORTHO05D010243 4.6e-09 65.1 53 60.4
Glyma.20G227700 Glycine max HOM05D000358 ORTHO05D010243 2.1e-06 56.2 57 52.6


User provided reference genes

Program Settings