Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p022214 Quercus lobata HOM05D000023 ORTHO05D000014 2.1e-42 175.3 88 100.0
QL10p065953 Quercus lobata HOM05D000023 ORTHO05D000014 3.4e-40 167.9 88 94.3
QL10p003965 Quercus lobata HOM05D000023 ORTHO05D000014 9.0e-33 143.3 88 81.8
QL05p037792 Quercus lobata HOM05D000003 ORTHO05D000014 2.3e-28 128.6 88 73.9
QL10p013035 Quercus lobata HOM05D000023 ORTHO05D000014 1.1e-27 126.3 79 79.7
QL01p046256 Quercus lobata HOM05D000003 ORTHO05D000006 2.2e-15 85.5 58 75.9
Hma1.2p1_0696F.1_g204565 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.5e-11 72.8 87 47.1
Hma1.2p1_0696F.1_g204590 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.5e-11 72.8 87 47.1
Hma1.2p1_0696F.1_g204600 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 2.5e-11 72.0 80 47.5
Hma1.2p1_0924F.1_g237305 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 2.5e-11 72.0 80 47.5
Hma1.2p1_0696F.1_g204543 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 4.3e-11 71.2 81 45.7
Hma1.2p1_0696F.1_g204566 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 4.3e-11 71.2 81 45.7
Hma1.2p1_0696F.1_g204567 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 4.3e-11 71.2 81 45.7
Hma1.2p1_0696F.1_g204592 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 4.3e-11 71.2 81 45.7
Hma1.2p1_0696F.1_g204593 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 4.3e-11 71.2 81 45.7
Hma1.2p1_0696F.1_g204597 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 9.7e-11 70.1 81 45.7
Hma1.2p1_0153F.1_g067910 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.3e-10 69.7 81 45.7
Hma1.2p1_0696F.1_g204560 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.3e-10 69.7 81 45.7
Hma1.2p1_0696F.1_g204562 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.3e-10 69.7 81 45.7
Hma1.2p1_0696F.1_g204563 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.3e-10 69.7 80 45.0
Hma1.2p1_0696F.1_g204564 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.3e-10 69.7 80 45.0
Hma1.2p1_0696F.1_g204573 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.3e-10 69.7 81 45.7
Hma1.2p1_0696F.1_g204576 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.3e-10 69.7 81 45.7
Hma1.2p1_0696F.1_g204579 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.3e-10 69.7 80 45.0
Hma1.2p1_0696F.1_g204580 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.3e-10 69.7 80 45.0
Hma1.2p1_0696F.1_g204595 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.3e-10 69.7 81 45.7
Hma1.2p1_0696F.1_g204596 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.3e-10 69.7 81 45.7
Hma1.2p1_2288F.1_g318960 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.7e-10 69.3 79 50.6
Actinidia33656 Actinidia chinensis HOM05D000023 ORTHO05D000014 6.3e-10 67.4 87 48.3
CSS0011756 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 8.2e-10 67.0 88 46.6
CSS0002633 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.1e-09 66.6 88 46.6
CSS0016346 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.1e-09 66.6 88 46.6
CSS0028127 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.1e-09 66.6 88 46.6
CSS0029366 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.1e-09 66.6 88 46.6
GSVIVG01012413001 Vitis vinifera HOM05D000023 ORTHO05D000014 1.4e-09 66.2 87 47.1
PGSC0003DMG400030247 Solanum tuberosum HOM05D000023 ORTHO05D000014 2.4e-09 65.5 91 45.1
Glyma.01G121600 Glycine max HOM05D000023 ORTHO05D000014 3.1e-09 65.1 85 43.5
Glyma.02G159600 Glycine max HOM05D000023 ORTHO05D000014 3.1e-09 65.1 85 43.5
Glyma.09G000200 Glycine max HOM05D000023 ORTHO05D000014 3.1e-09 65.1 85 43.5
Glyma.13G192700 Glycine max HOM05D000023 ORTHO05D000014 3.1e-09 65.1 85 43.5
Glyma.18G099100 Glycine max HOM05D000023 ORTHO05D000014 3.1e-09 65.1 85 43.5
Glyma.19G102600 Glycine max HOM05D000023 ORTHO05D000014 4.1e-09 64.7 85 42.4
Glyma.20G072800 Glycine max HOM05D000023 ORTHO05D000014 4.1e-09 64.7 84 44.0
Glyma.06G230700 Glycine max HOM05D000023 ORTHO05D000014 5.3e-09 64.3 85 42.4
Glyma.03G080400 Glycine max HOM05D000023 ORTHO05D000014 9.1e-09 63.5 85 42.4
GSVIVG01028492001 Vitis vinifera HOM05D000023 ORTHO05D012697 9.1e-09 63.5 87 44.8
CSS0009102 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.2e-08 63.2 91 44.0
Glyma.06G237800 Glycine max HOM05D000023 ORTHO05D000014 1.2e-08 63.2 74 45.9
Glyma.10G113200 Glycine max HOM05D000023 ORTHO05D000014 1.2e-08 63.2 74 45.9
Glyma.14G162700 Glycine max HOM05D000023 ORTHO05D000014 1.2e-08 63.2 74 45.9
Hma1.2p1_2277F.1_g318660 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.2e-08 63.2 69 50.7
Glyma.04G114900 Glycine max HOM05D000023 ORTHO05D000014 1.5e-08 62.8 70 47.1
Glyma.06G219500 Glycine max HOM05D000023 ORTHO05D000014 1.5e-08 62.8 70 47.1
Glyma.20G074600 Glycine max HOM05D000023 ORTHO05D000014 1.5e-08 62.8 70 47.1
Glyma.19G103700 Glycine max HOM05D000023 ORTHO05D000014 2.0e-08 62.4 65 56.9
CSS0034212 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 2.6e-08 62.0 91 44.0
Lj4g0000084 Lotus japonicus HOM05D000023 ORTHO05D000014 2.6e-08 62.0 84 45.2
Glyma.06G236900 Glycine max HOM05D000023 ORTHO05D000014 3.4e-08 61.6 74 45.9
SHI11824 Sapria himalayana HOM05D000023 ORTHO05D000014 3.4e-08 61.6 67 50.7
Nn8g40496 Nelumbo nucifera HOM05D017141 ORTHO05D000014 4.5e-08 61.2 82 48.8
QL01p001421 Quercus lobata HOM05D000023 ORTHO05D000014 4.5e-08 61.2 73 47.9
QL02p096245 Quercus lobata HOM05D000023 ORTHO05D000014 4.5e-08 61.2 87 42.5
Glyma.12G152900 Glycine max HOM05D000023 ORTHO05D000014 7.7e-08 60.5 85 42.4
Glyma.04G163700 Glycine max HOM05D000023 ORTHO05D000014 1.7e-07 59.3 76 42.1
CSS0008268 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 2.2e-07 58.9 73 49.3
CSS0050122 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 2.2e-07 58.9 73 49.3
Lj4g0005907 Lotus japonicus HOM05D000023 ORTHO05D000014 2.2e-07 58.9 73 43.8
Glyma.12G105500 Glycine max HOM05D000023 ORTHO05D000014 2.9e-07 58.5 65 53.8
Sopen01g010490 Solanum pennellii HOM05D000023 ORTHO05D000014 2.9e-07 58.5 65 49.2
Sopen01g050040 Solanum pennellii HOM05D000023 ORTHO05D000014 2.9e-07 58.5 65 49.2
Sopen02g012930 Solanum pennellii HOM05D000023 ORTHO05D000014 2.9e-07 58.5 65 49.2
Sopen09g012170 Solanum pennellii HOM05D000023 ORTHO05D000014 2.9e-07 58.5 65 49.2
Sopen10g005310 Solanum pennellii HOM05D000023 ORTHO05D000014 2.9e-07 58.5 65 49.2
Sopen10g007400 Solanum pennellii HOM05D000023 ORTHO05D000014 2.9e-07 58.5 65 49.2
Sopen10g023190 Solanum pennellii HOM05D000002 ORTHO05D000001 2.9e-07 58.5 62 51.6
Sopen11g018050 Solanum pennellii HOM05D000023 ORTHO05D000014 2.9e-07 58.5 65 49.2
Glyma.10G121900 Glycine max HOM05D000023 ORTHO05D000014 3.8e-07 58.2 70 44.3
MSTRG.16385 Avicennia marina HOM05D000023 ORTHO05D000014 5.0e-07 57.8 88 38.6
MSTRG.22845 Avicennia marina HOM05D000023 ORTHO05D000014 5.0e-07 57.8 88 38.6
Lj1g0014944 Lotus japonicus HOM05D000023 ORTHO05D000014 5.0e-07 57.8 73 46.6
QL04p080373 Quercus lobata HOM05D000023 ORTHO05D000014 5.0e-07 57.8 91 41.8
QL10p011117 Quercus lobata HOM05D000023 ORTHO05D000014 5.0e-07 57.8 87 41.4
Sopen04g029610 Solanum pennellii HOM05D000023 ORTHO05D000014 5.0e-07 57.8 64 50.0
CSS0008330 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 6.5e-07 57.4 70 45.7
CSS0009823 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 6.5e-07 57.4 91 40.7
Sopen04g027700 Solanum pennellii HOM05D000023 ORTHO05D000014 6.5e-07 57.4 64 48.4
C09p51190 Brassica napus HOM05D000023 ORTHO05D000014 8.5e-07 57.0 70 41.4
Hund19619 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.1e-06 56.6 84 44.0
SHI30376 Sapria himalayana HOM05D000023 ORTHO05D000014 1.9e-06 55.8 75 45.3
Sopen02g003630 Solanum pennellii HOM05D000023 ORTHO05D000014 1.9e-06 55.8 65 47.7
Sopen11g015710 Solanum pennellii HOM05D000023 ORTHO05D000014 1.9e-06 55.8 65 47.7
CSS0017113 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 2.5e-06 55.5 70 45.7
CSS0019963 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 2.5e-06 55.5 70 50.0
CSS0005925 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 3.2e-06 55.1 53 50.9
Nn4g22042 Nelumbo nucifera HOM05D017141 ORTHO05D000014 3.2e-06 55.1 85 44.7
SHI38292 Sapria himalayana HOM05D000023 ORTHO05D000014 3.2e-06 55.1 67 47.8
SGA_v2.0_scaffold33G13370 Striga asiatica HOM05D000023 ORTHO05D000014 3.2e-06 55.1 88 37.5
BraA09t39253Z Brassica rapa HOM05D000023 ORTHO05D000014 4.2e-06 54.7 62 45.2
SHI22314 Sapria himalayana HOM05D000023 ORTHO05D000014 4.2e-06 54.7 96 41.7
Hund00488 Selenicereus undatus HOM05D000023 ORTHO05D000014 4.2e-06 54.7 84 42.9
HanXRQChr08g0234151 Helianthus annuus HOM05D000766 ORTHO05D000587 5.5e-06 54.3 82 41.5
SHI03802 Sapria himalayana HOM05D000023 ORTHO05D000014 5.5e-06 54.3 82 45.1
Hund12079 Selenicereus undatus HOM05D000023 ORTHO05D000014 5.5e-06 54.3 84 41.7
Sopen11g024690 Solanum pennellii HOM05D000023 ORTHO05D000014 5.5e-06 54.3 81 43.2
arahy.Tifrunner.gnm1.ann1.QTT6TB Arachis hypogaea HOM05D000023 ORTHO05D000014 9.4e-06 53.5 88 39.8
C09p38450 Brassica napus HOM05D000023 ORTHO05D000014 9.4e-06 53.5 70 44.3
BolC5t30750H Brassica oleracea HOM05D000023 ORTHO05D000014 9.4e-06 53.5 62 43.5
BolC9t56699H Brassica oleracea HOM05D000023 ORTHO05D000014 9.4e-06 53.5 70 44.3
Glyma.08G294500 Glycine max HOM05D000023 ORTHO05D000014 9.4e-06 53.5 58 44.8
SHI05693 Sapria himalayana HOM05D000023 ORTHO05D000014 9.4e-06 53.5 67 49.3


User provided reference genes

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