Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p021882 Quercus lobata HOM05D006406 ORTHO05D007883 1.7e-188 662.5 333 100.0
QL03p020986 Quercus lobata HOM05D006406 ORTHO05D007883 1.2e-186 656.4 333 97.0
Haze_04140 Corylus avellana HOM05D006406 ORTHO05D007883 1.1e-158 563.5 336 83.6
Cfa006628 Carpinus fangiana HOM05D006406 ORTHO05D007883 2.6e-157 558.9 336 83.0
CiPaw.08G161900 Carya illinoinensis HOM05D006406 ORTHO05D007883 8.7e-153 543.9 342 78.7
MD04G1200800 Malus domestica HOM05D006406 ORTHO05D007883 3.3e-136 488.8 340 74.4
RcHm_v2.0_Chr3g0455711 Rosa chinensis HOM05D006406 ORTHO05D007883 5.6e-136 488.0 340 72.9
Duzib177G0190 Durio zibethinus HOM05D006406 ORTHO05D007883 1.1e-134 483.8 336 71.1
Sabra13G0015900 Salix brachista HOM05D006406 ORTHO05D007883 3.4e-133 478.8 341 71.0
Thecc.05G312900 Theobroma cacao HOM05D006406 ORTHO05D007883 3.4e-133 478.8 335 70.7
Sabra13G0020100 Salix brachista HOM05D006406 ORTHO05D007883 1.3e-132 476.9 341 70.7
Potri.013G017100 Populus trichocarpa HOM05D006406 ORTHO05D007883 2.9e-132 475.7 346 69.7
Glyma.03G235700 Glycine max HOM05D006406 ORTHO05D007883 6.4e-132 474.6 338 69.8
Manes.08G117600 Manihot esculenta HOM05D006406 ORTHO05D007883 6.4e-132 474.6 338 70.4
Prupe.6G320900 Prunus persica HOM05D006406 ORTHO05D007883 6.4e-132 474.6 315 76.8
COL.COLO4_10518 Corchorus olitorius HOM05D006406 ORTHO05D007883 3.2e-131 472.2 336 70.8
Ciclev10001711m.g Citrus clementina HOM05D006406 ORTHO05D007883 7.1e-131 471.1 341 68.0
Medtr7g112650 Medicago truncatula HOM05D006406 ORTHO05D007883 6.7e-129 464.5 317 70.7
PGR083G2713 Punica granatum HOM05D006406 ORTHO05D007883 8.7e-129 464.2 300 75.3
arahy.Tifrunner.gnm1.ann1.Q6XDLT Arachis hypogaea HOM05D006406 ORTHO05D007883 1.1e-128 463.8 336 67.9
Cpa.g.sc48.95 Carica papaya HOM05D006406 ORTHO05D007883 5.6e-128 461.5 307 73.0
Lalb_Chr18g0045761 Lupinus albus HOM05D006406 ORTHO05D007883 2.1e-127 459.5 336 67.9
FAN14G3705 Fragaria x ananassa HOM05D006406 ORTHO05D007883 2.8e-127 459.1 310 74.2
arahy.Tifrunner.gnm1.ann1.PP7FUY Arachis hypogaea HOM05D006406 ORTHO05D007883 4.8e-127 458.4 336 67.0
Atru.chr2.29 Acer truncatum HOM05D006406 ORTHO05D007883 3.1e-126 455.7 341 67.7
Gohir.A13G109200 Gossypium hirsutum HOM05D006406 ORTHO05D007883 9.0e-126 454.1 335 67.2
GSVIVG01031144001 Vitis vinifera HOM05D006406 ORTHO05D007883 2.0e-125 453.0 346 68.2
Gorai.013G125700 Gossypium raimondii HOM05D006406 ORTHO05D007883 2.6e-125 452.6 335 67.2
Lj1g0022852 Lotus japonicus HOM05D006406 ORTHO05D007883 4.5e-125 451.8 320 69.4
Rhsim07G0188300 Rhododendron simsii HOM05D006406 ORTHO05D007883 1.7e-124 449.9 298 73.2
TAR633G0157 Trochodendron aralioides HOM05D006406 ORTHO05D007883 2.2e-124 449.5 351 65.0
Ca_05800_v3 Cicer arietinum L. HOM05D006406 ORTHO05D007883 3.8e-124 448.7 303 70.3
Eucgr.B01914 Eucalyptus grandis HOM05D006406 ORTHO05D007883 4.9e-124 448.4 362 65.7
TPR.G33225 Trifolium pratense HOM05D006406 ORTHO05D007883 1.1e-123 447.2 325 68.9
Hma1.2p1_1212F.1_g267260 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 1.4e-123 446.8 330 67.3
Phvul.006G089700 Phaseolus vulgaris HOM05D006406 ORTHO05D007883 4.2e-123 445.3 333 66.1
TWI12G0288 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 5.5e-123 444.9 344 65.7
Gohir.D13G112000 Gossypium hirsutum HOM05D006406 ORTHO05D007883 1.6e-122 443.4 313 69.6
CsaV3_1G038840 Cucumis sativus L. HOM05D006406 ORTHO05D007883 2.7e-122 442.6 336 64.9
Nn4g25830 Nelumbo nucifera HOM05D006406 ORTHO05D007883 2.7e-122 442.6 359 63.2
CANSAT54G1062 Cannabis sativa HOM05D006406 ORTHO05D007883 1.0e-121 440.7 344 65.4
Lj9C146T2 Lonicera japonica HOM05D006406 ORTHO05D007883 1.3e-121 440.3 310 69.4
Actinidia35561 Actinidia chinensis HOM05D006406 ORTHO05D007883 2.3e-121 439.5 350 64.6
TWI36G0652 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 2.3e-121 439.5 344 65.1
Aqoxy5G00730 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 3.9e-121 438.7 314 69.1
FAN05G5419 Fragaria x ananassa HOM05D006406 ORTHO05D007883 3.9e-121 438.7 306 72.9
VMungo0540G0116 Vigna mungo HOM05D006406 ORTHO05D007883 6.7e-121 438.0 338 65.4
vmacro04816 Vaccinium macrocarpon HOM05D006406 ORTHO05D007883 2.5e-120 436.0 355 63.1
Oeu043348.1 Olea europaea HOM05D006406 ORTHO05D007883 3.3e-120 435.6 314 69.1
Carub.0006s2486 Capsella rubella HOM05D006406 ORTHO05D007883 4.3e-120 435.3 334 63.5
Hund07096 Selenicereus undatus HOM05D006406 ORTHO05D007883 4.3e-120 435.3 339 64.9
AT5G27710 Arabidopsis thaliana HOM05D006406 ORTHO05D007883 5.7e-120 434.9 336 63.4
Sc16g0008820 Simmondsia chinensis HOM05D006406 ORTHO05D007883 4.8e-119 431.8 340 64.4
ClCG03G017120 Citrullus lanatus HOM05D006406 ORTHO05D007883 6.3e-119 431.4 340 63.2
Thhalv10005730m.g Eutrema salsugineum HOM05D006406 ORTHO05D007883 1.4e-118 430.3 329 65.0
MBI18_g46420_MAGBIO Magnolia biondii HOM05D006406 ORTHO05D007883 1.4e-118 430.3 319 65.8
CAN.G1459.10 Capsicum annuum HOM05D006406 ORTHO05D007883 3.1e-118 429.1 314 67.5
Psat0s27g0120 Pisum sativum HOM05D006406 ORTHO05D007883 3.1e-118 429.1 315 66.3
SalBow7G2778 Salvia bowleyana HOM05D006406 ORTHO05D007883 3.1e-118 429.1 298 68.5
Aa31LG11G9460 Aethionema arabicum HOM05D006406 ORTHO05D007883 5.3e-118 428.3 329 64.4
AL6G39250 Arabidopsis lyrata HOM05D006406 ORTHO05D007883 9.0e-118 427.6 336 62.5
THA.LOC104818716 Tarenaya hassleriana HOM05D006406 ORTHO05D007883 1.5e-117 426.8 336 64.6
EL10Ac4g09916 Beta vulgaris HOM05D006406 ORTHO05D007883 2.0e-117 426.4 298 69.8
Nitab4.5_0003658g0090 Nicotiana tabacum HOM05D006406 ORTHO05D007883 4.5e-117 425.2 304 66.4
Hund07097 Selenicereus undatus HOM05D006406 ORTHO05D007883 4.5e-117 425.2 296 68.6
Sed0006495 Sechium edule HOM05D006406 ORTHO05D007883 1.3e-116 423.7 341 61.3
Sp2g20880 Schrenkiella parvula HOM05D006406 ORTHO05D007883 5.0e-116 421.8 335 62.7
Peaxi162Scf00037g01125 Petunia axillaris HOM05D006406 ORTHO05D007883 7.2e-115 417.9 299 67.9
Sopen01g043220 Solanum pennellii HOM05D006406 ORTHO05D007883 9.4e-115 417.5 304 66.8
Solyc01g099700.3 Solanum lycopersicum HOM05D006406 ORTHO05D007883 1.2e-114 417.2 304 66.4
SGA_v2.0_scaffold172G38986 Striga asiatica HOM05D006406 ORTHO05D007883 1.2e-114 417.2 304 68.1
Nitab4.5_0003844g0020 Nicotiana tabacum HOM05D006406 ORTHO05D007883 1.0e-113 414.1 293 67.9
PGSC0003DMG400007542 Solanum tuberosum HOM05D006406 ORTHO05D007883 1.0e-113 414.1 307 66.1
unitig_52.g17112 Utricularia gibba HOM05D006406 ORTHO05D007883 3.7e-111 405.6 298 65.8
BcaB04g19684 Brassica carinata HOM05D006406 ORTHO05D007883 4.8e-111 405.2 333 61.9
CSS0003718 Camellia sinensis var. sinensis HOM05D006406 ORTHO05D007883 6.3e-111 404.8 347 62.2
AUR62000764 Chenopodium quinoa HOM05D006406 ORTHO05D007883 8.2e-111 404.4 302 65.2
A09p05410 Brassica napus HOM05D006406 ORTHO05D007883 9.1e-110 401.0 330 62.1
BraA09t36179Z Brassica rapa HOM05D006406 ORTHO05D007883 1.2e-109 400.6 330 62.1
Migut.N01744 Erythranthe guttata HOM05D006406 ORTHO05D007883 1.7e-108 396.7 305 64.3
BcaC04g23642 Brassica carinata HOM05D006406 ORTHO05D007883 7.2e-107 391.3 330 60.6
PSO210G1688 Papaver somniferum HOM05D006406 ORTHO05D007883 4.7e-106 388.7 333 61.9
HanXRQChr11g0339311 Helianthus annuus HOM05D006406 ORTHO05D007883 1.0e-105 387.5 279 66.7
C09p05890 Brassica napus HOM05D006406 ORTHO05D007883 2.3e-105 386.3 331 60.7
BolC9t53515H Brassica oleracea HOM05D006406 ORTHO05D007883 2.3e-105 386.3 331 60.7
PSO210G1514 Papaver somniferum HOM05D006406 ORTHO05D007883 2.3e-105 386.3 340 60.9
CARHR186230 Cardamine hirsuta HOM05D006406 ORTHO05D007883 3.0e-105 386.0 311 60.8
ECA236G2290 Erigeron canadensis HOM05D006406 ORTHO05D007883 6.7e-105 384.8 289 64.7
Lsat_1_v5_gn_9_88181 Lactuca sativa HOM05D006406 ORTHO05D007883 7.4e-104 381.3 328 59.8
Cc02_g34120 Coffea canephora HOM05D006406 ORTHO05D007883 6.3e-103 378.3 214 80.8
Os07g0673000 Oryza sativa ssp. japonica HOM05D006406 ORTHO05D007883 5.9e-101 371.7 267 65.5
Ah.06g189770 Amaranthus hybridus HOM05D006406 ORTHO05D007883 3.8e-100 369.0 269 66.5
Dinv30810 Davidia involucrata HOM05D006406 ORTHO05D007883 3.8e-100 369.0 254 70.5
CDE11G0411 Ceratophyllum demersum HOM05D001335 ORTHO05D001184 8.5e-100 367.9 306 58.2
AUR62005205 Chenopodium quinoa HOM05D006406 ORTHO05D007883 1.1e-99 367.5 321 59.2
Glyma.19G233500 Glycine max HOM05D006406 ORTHO05D007883 7.2e-99 364.8 284 65.5
ATR0796G153 Amborella trichopoda HOM05D006406 ORTHO05D007883 6.7e-97 358.2 231 69.7
FvH4_6g06560 Fragaria vesca HOM05D006406 ORTHO05D007883 2.9e-92 342.8 246 70.3
DCAR_029393 Daucus carota HOM05D006406 ORTHO05D007883 6.5e-92 341.7 348 53.2
SEGI_05797 Sequoiadendron giganteum HOM05D006406 ORTHO05D007883 9.7e-88 327.8 299 53.8
MELO3C015308.2 Cucumis melo HOM05D006406 ORTHO05D007883 3.4e-80 302.8 343 49.3
Pp3c6_26830 Physcomitrium patens HOM05D006406 ORTHO05D007883 3.2e-70 269.6 346 38.4
Mapoly0054s0047 Marchantia polymorpha HOM05D006406 ORTHO05D007883 2.7e-69 266.5 302 44.0
SMO172G0153 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 4.5e-69 265.8 284 45.8
SMO172G0232 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 7.3e-67 258.5 285 44.6
Zm00001eb111280 Zea mays HOM05D006406 ORTHO05D007883 7.3e-67 258.5 244 55.3
Hma1.2p1_1212F.1_g267270 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 3.4e-64 249.6 217 60.4
Oeu043349.1 Olea europaea HOM05D006406 ORTHO05D007883 1.0e-60 238.0 201 62.2
CBR_g19246 Chara braunii HOM05D006406 ORTHO05D007883 4.3e-59 232.6 238 45.0
PGSC0003DMG400024710 Solanum tuberosum HOM05D006406 ORTHO05D007883 9.5e-59 231.5 196 60.2
HPP92_011843 Vanilla planifolia HOM05D006406 ORTHO05D007883 3.7e-55 219.5 313 41.2
SMO198G0100 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 3.1e-49 199.9 275 39.6
arahy.Tifrunner.gnm1.ann1.AST3BR Arachis hypogaea HOM05D006406 ORTHO05D007883 4.4e-48 196.1 165 57.0
PSO421G0497 Papaver somniferum HOM05D006406 ORTHO05D007883 1.6e-42 177.6 327 34.9
FAN02G3513 Fragaria x ananassa HOM05D006406 ORTHO05D007883 6.4e-39 165.6 160 58.8
MSTRG.16393 Avicennia marina HOM05D006406 ORTHO05D007883 6.9e-33 145.6 144 56.9
AagrBONN_evm.TU.Sc2ySwM_362.2555 Anthoceros agrestis HOM05D006406 ORTHO05D007883 5.8e-32 142.5 114 56.1
BcaB07g32734 Brassica carinata HOM05D006406 ORTHO05D007883 1.9e-19 100.9 135 45.2
Lsat_1_v5_gn_5_186620 Lactuca sativa HOM05D006406 ORTHO05D007883 3.3e-11 73.6 162 35.2
AL3G41450 Arabidopsis lyrata HOM05D000059 ORTHO05D000128 1.4e-09 68.2 41 75.6
Cre09.g392700 Chlamydomonas reinhardtii HOM05D006406 ORTHO05D007883 1.8e-09 67.8 95 43.2
Aqoxy601s001 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 1.2e-08 65.1 34 82.4
SMO172G0225 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 6.5e-07 59.3 78 38.5


User provided reference genes

Program Settings