Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p021609 Quercus lobata HOM05D000246 ORTHO05D010002 8.0e-94 347.1 172 100.0
QL03p021621 Quercus lobata HOM05D000246 ORTHO05D007179 3.0e-93 345.1 171 100.0
Haze_04248 Corylus avellana HOM05D000108 ORTHO05D006029 9.7e-31 137.5 141 51.1
Haze_04236 Corylus avellana HOM05D000160 ORTHO05D010002 4.1e-29 132.1 131 51.9
Cfa006546 Carpinus fangiana HOM05D000160 ORTHO05D010002 9.0e-29 131.0 135 51.1
Cfa006548 Carpinus fangiana HOM05D000160 ORTHO05D010002 1.2e-28 130.6 135 51.1
QL05p074554 Quercus lobata HOM05D000068 ORTHO05D010002 8.5e-27 124.4 166 45.2
QL03p001287 Quercus lobata HOM05D000246 ORTHO05D010002 2.5e-26 122.9 191 39.3
QL03p001227 Quercus lobata HOM05D000246 ORTHO05D010002 1.1e-23 114.0 183 38.8
Cpa.g.sc953.3 Carica papaya HOM05D000160 ORTHO05D010002 4.1e-21 105.5 127 45.7
Cpa.g.sc67.18 Carica papaya HOM05D000160 ORTHO05D010002 7.7e-20 101.3 130 42.3
Dinv40345 Davidia involucrata HOM05D000160 ORTHO05D010002 9.1e-13 77.8 118 36.4
Dinv40347 Davidia involucrata HOM05D000160 ORTHO05D010002 5.9e-12 75.1 119 36.1
Sabra19G0082100 Salix brachista HOM05D000246 ORTHO05D010002 2.9e-11 72.8 113 37.2
TAR624G0515 Trochodendron aralioides HOM05D000160 ORTHO05D010002 1.1e-10 70.9 121 33.9
SGA_v2.0_scaffold181G39683 Striga asiatica HOM05D000160 ORTHO05D000496 2.5e-10 69.7 123 34.1
Potri.015G097500 Populus trichocarpa HOM05D000160 ORTHO05D000496 5.5e-10 68.6 119 35.3
Sed0001317 Sechium edule HOM05D000160 ORTHO05D000496 7.2e-10 68.2 120 32.5
Cpa.g.sc57.20 Carica papaya HOM05D000160 ORTHO05D010002 4.7e-09 65.5 121 37.2
Sed0014850 Sechium edule HOM05D000160 ORTHO05D000496 4.7e-09 65.5 120 30.8
MELO3C024200.2 Cucumis melo HOM05D000160 ORTHO05D000496 6.1e-09 65.1 120 31.7
CsaV3_7G002580 Cucumis sativus L. HOM05D000160 ORTHO05D000496 6.1e-09 65.1 120 31.7
DCAR_007001 Daucus carota HOM05D000160 ORTHO05D000496 6.1e-09 65.1 129 34.9
ClCG02G002800 Citrullus lanatus HOM05D000160 ORTHO05D000496 8.0e-09 64.7 120 31.7
Sabra15G0118200 Salix brachista HOM05D000160 ORTHO05D000496 2.3e-08 63.2 119 33.6
CAN.G1036.5 Capsicum annuum HOM05D000160 ORTHO05D000496 3.0e-08 62.8 125 31.2
Ciclev10030731m.g Citrus clementina HOM05D000160 ORTHO05D000496 5.2e-08 62.0 118 33.1
Dinv22339 Davidia involucrata HOM05D000160 ORTHO05D010002 6.7e-08 61.6 116 31.0
Lsat_1_v5_gn_9_58021 Lactuca sativa HOM05D000160 ORTHO05D000496 2.6e-07 59.7 118 32.2
Oeu018553.1 Olea europaea HOM05D000160 ORTHO05D016357 2.6e-07 59.7 110 35.5
TWI23G0593 Tripterygium wilfordii HOM05D000160 ORTHO05D000496 7.4e-07 58.2 120 31.7
HPP92_013606 Vanilla planifolia HOM05D000160 ORTHO05D000496 7.4e-07 58.2 119 28.6
THA.LOC104826626 Tarenaya hassleriana HOM05D000160 ORTHO05D000496 1.3e-06 57.4 117 28.2
Dinv22334 Davidia involucrata HOM05D000160 ORTHO05D010002 1.7e-06 57.0 116 28.4
THA.LOC104826625 Tarenaya hassleriana HOM05D000160 ORTHO05D000496 1.7e-06 57.0 117 28.2
HanXRQChr15g0493151 Helianthus annuus HOM05D000160 ORTHO05D000496 2.2e-06 56.6 118 31.4
Oeu018465.1 Olea europaea HOM05D001406 ORTHO05D002467 2.2e-06 56.6 85 41.2
FAN13G0072 Fragaria x ananassa HOM05D000160 ORTHO05D000496 2.8e-06 56.2 138 28.3
PGSC0003DMG400015261 Solanum tuberosum HOM05D000160 ORTHO05D000496 3.7e-06 55.8 119 32.8
TPR.G22355 Trifolium pratense HOM05D001406 ORTHO05D002467 3.7e-06 55.8 91 38.5
TAR627G0717 Trochodendron aralioides HOM05D000160 ORTHO05D000496 3.7e-06 55.8 139 26.6
Ah.13g069970 Amaranthus hybridus HOM05D000160 ORTHO05D000496 6.3e-06 55.1 139 30.2


User provided reference genes

Program Settings