Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p020127 Quercus lobata HOM05D005910 ORTHO05D007088 5.0e-55 217.6 118 100.0
QL07p006238 Quercus lobata HOM05D005910 ORTHO05D007088 7.3e-46 187.2 118 87.3
QL07p024560 Quercus lobata HOM05D005910 ORTHO05D007088 9.2e-41 170.2 107 87.9
Ciclev10013918m.g Citrus clementina HOM05D005910 ORTHO05D007088 3.5e-32 141.7 90 83.3
Atru.chr8.1156 Acer truncatum HOM05D005910 ORTHO05D007088 1.0e-31 140.2 107 73.8
PGR142G2565 Punica granatum HOM05D005910 ORTHO05D007088 1.3e-31 139.8 90 83.3
CANSAT64G0849 Cannabis sativa HOM05D005910 ORTHO05D007088 3.9e-31 138.3 107 72.9
CsaV3_3G038630 Cucumis sativus L. HOM05D005910 ORTHO05D007088 8.6e-31 137.1 90 81.1
Manes.09G037701 Manihot esculenta HOM05D005910 ORTHO05D007088 8.6e-31 137.1 90 81.1
ClCG10G017690 Citrullus lanatus HOM05D005910 ORTHO05D007088 1.1e-30 136.7 90 80.0
MELO3C009607.2 Cucumis melo HOM05D005910 ORTHO05D007088 2.5e-30 135.6 90 80.0
Medtr7g085050 Medicago truncatula HOM05D005910 ORTHO05D007088 5.6e-30 134.4 90 78.9
Prupe.7G082200 Prunus persica HOM05D005910 ORTHO05D007088 5.6e-30 134.4 91 79.1
Thecc.05G175100 Theobroma cacao HOM05D005910 ORTHO05D007088 5.6e-30 134.4 90 78.9
Glyma.16G043900 Glycine max HOM05D005910 ORTHO05D007088 7.3e-30 134.0 90 77.8
Glyma.19G108300 Glycine max HOM05D005910 ORTHO05D007088 7.3e-30 134.0 90 77.8
MD12G1054500 Malus domestica HOM05D005910 ORTHO05D007088 7.3e-30 134.0 99 74.7
Phvul.001G097100 Phaseolus vulgaris HOM05D005910 ORTHO05D007088 7.3e-30 134.0 90 77.8
TWI77G0716 Tripterygium wilfordii HOM05D005910 ORTHO05D007088 7.3e-30 134.0 90 77.8
VMungo1383G3424 Vigna mungo HOM05D005910 ORTHO05D007088 7.3e-30 134.0 90 77.8
Duzib106G1486 Durio zibethinus HOM05D005910 ORTHO05D007088 9.6e-30 133.7 90 78.9
Lj1g0011929 Lotus japonicus HOM05D005910 ORTHO05D007088 9.6e-30 133.7 90 78.9
TPR.G5912 Trifolium pratense HOM05D005910 ORTHO05D007088 9.6e-30 133.7 90 78.9
Cpa.g.sc85.46 Carica papaya HOM05D005910 ORTHO05D007088 1.2e-29 133.3 107 69.2
Gohir.A09G128900 Gossypium hirsutum HOM05D005910 ORTHO05D007088 1.2e-29 133.3 90 78.9
Gohir.D09G124900 Gossypium hirsutum HOM05D005910 ORTHO05D007088 1.2e-29 133.3 90 78.9
Gorai.006G143800 Gossypium raimondii HOM05D005910 ORTHO05D007088 1.2e-29 133.3 90 78.9
Sed0016712 Sechium edule HOM05D005910 ORTHO05D007088 1.2e-29 133.3 90 77.8
Ca_08246_v3 Cicer arietinum L. HOM05D005910 ORTHO05D007088 1.6e-29 132.9 90 77.8
FAN02G0902 Fragaria x ananassa HOM05D005910 ORTHO05D007088 1.6e-29 132.9 104 71.2
FAN05G0623 Fragaria x ananassa HOM05D005910 ORTHO05D007088 1.6e-29 132.9 104 71.2
FAN14G5103 Fragaria x ananassa HOM05D005910 ORTHO05D007088 1.6e-29 132.9 104 71.2
Psat3g091080 Pisum sativum HOM05D005910 ORTHO05D007088 1.6e-29 132.9 90 77.8
COL.COLO4_29362 Corchorus olitorius HOM05D005910 ORTHO05D007088 2.8e-29 132.1 90 77.8
Lalb_Chr22g0359441 Lupinus albus HOM05D005910 ORTHO05D007088 2.8e-29 132.1 90 76.7
RcHm_v2.0_Chr3g0479191 Rosa chinensis HOM05D005910 ORTHO05D007088 2.8e-29 132.1 104 71.2
FvH4_6g21840 Fragaria vesca HOM05D005910 ORTHO05D007088 3.6e-29 131.7 104 70.2
Lalb_Chr14g0364291 Lupinus albus HOM05D005910 ORTHO05D007088 6.2e-29 131.0 90 76.7
Carub.0003s1137 Capsella rubella HOM05D005910 ORTHO05D007088 1.1e-28 130.2 107 70.1
CiPaw.10G025100 Carya illinoinensis HOM05D005910 ORTHO05D007088 1.4e-28 129.8 106 69.8
AL3G23640 Arabidopsis lyrata HOM05D005910 ORTHO05D007088 1.8e-28 129.4 107 70.1
AT3G12030 Arabidopsis thaliana HOM05D005910 ORTHO05D007088 1.8e-28 129.4 107 70.1
AT5G06660 Arabidopsis thaliana HOM05D005910 ORTHO05D007088 1.8e-28 129.4 107 69.2
Manes.08G042400 Manihot esculenta HOM05D005910 ORTHO05D007088 1.8e-28 129.4 80 83.8
Aa31LG3G5420 Aethionema arabicum HOM05D005910 ORTHO05D007088 2.4e-28 129.0 107 69.2
BcaC09g48209 Brassica carinata HOM05D005910 ORTHO05D007088 2.4e-28 129.0 107 69.2
BraA01t04144Z Brassica rapa HOM05D005910 ORTHO05D007088 3.1e-28 128.6 107 68.2
CARHR206550 Cardamine hirsuta HOM05D005910 ORTHO05D007088 3.1e-28 128.6 107 70.1
Thhalv10022159m.g Eutrema salsugineum HOM05D005910 ORTHO05D007088 4.0e-28 128.3 107 69.2
BolC1t05270H Brassica oleracea HOM05D005910 ORTHO05D007088 5.2e-28 127.9 107 68.2
CARHR086590 Cardamine hirsuta HOM05D005910 ORTHO05D007088 6.9e-28 127.5 107 68.2
Sp6g36210 Schrenkiella parvula HOM05D005910 ORTHO05D007088 6.9e-28 127.5 107 68.2
CiPaw.09G028200 Carya illinoinensis HOM05D005910 ORTHO05D007088 8.9e-28 127.1 106 68.9
BcaB04g21099 Brassica carinata HOM05D005910 ORTHO05D007088 1.5e-27 126.3 107 67.3
AL6G16750 Arabidopsis lyrata HOM05D005910 ORTHO05D007088 2.0e-27 125.9 107 68.2
Carub.0006s0554 Capsella rubella HOM05D005910 ORTHO05D007088 2.6e-27 125.6 104 70.2
Lj1P1133T16 Lonicera japonica HOM05D005910 ORTHO05D007088 2.6e-27 125.6 90 75.6
THA.LOC104799285 Tarenaya hassleriana HOM05D005910 ORTHO05D007088 2.6e-27 125.6 107 67.3
Sp3g10260 Schrenkiella parvula HOM05D005910 ORTHO05D007088 3.4e-27 125.2 107 68.2
Thhalv10016091m.g Eutrema salsugineum HOM05D005910 ORTHO05D007088 5.8e-27 124.4 107 67.3
DCAR_019862 Daucus carota HOM05D005910 ORTHO05D007088 7.6e-27 124.0 90 73.3
Dinv16345 Davidia involucrata HOM05D005910 ORTHO05D007088 7.6e-27 124.0 106 67.9
Rhsim04G0093900 Rhododendron simsii HOM05D005910 ORTHO05D007088 7.6e-27 124.0 107 65.4
Sabra16G0063200 Salix brachista HOM05D005910 ORTHO05D007088 9.9e-27 123.6 90 73.3
GSVIVG01033465001 Vitis vinifera HOM05D005910 ORTHO05D007088 1.3e-26 123.2 86 76.7
Haze_20022 Corylus avellana HOM05D005910 ORTHO05D007088 2.9e-26 122.1 76 81.6
Haze_20025 Corylus avellana HOM05D005910 ORTHO05D007088 2.9e-26 122.1 76 81.6
CSS0007798 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 3.8e-26 121.7 106 67.9
Cc06_g15530 Coffea canephora HOM05D005910 ORTHO05D007088 3.8e-26 121.7 104 67.3
Actinidia38597 Actinidia chinensis HOM05D005910 ORTHO05D007088 4.9e-26 121.3 89 73.0
Actinidia17287 Actinidia chinensis HOM05D005910 ORTHO05D007088 6.4e-26 120.9 90 74.4
Rhsim04G0095300 Rhododendron simsii HOM05D005910 ORTHO05D007088 6.4e-26 120.9 107 64.5
SGA_v2.0_scaffold69G23042 Striga asiatica HOM05D005910 ORTHO05D007088 6.4e-26 120.9 107 63.6
TAR623G1561 Trochodendron aralioides HOM05D005910 ORTHO05D007088 6.4e-26 120.9 83 77.1
ECA238G3575 Erigeron canadensis HOM05D005910 ORTHO05D007088 1.1e-25 120.2 107 65.4
TAR369G0766 Trochodendron aralioides HOM05D005910 ORTHO05D007088 1.1e-25 120.2 83 75.9
Hma1.2p1_0124F.1_g058350 Hydrangea macrophylla HOM05D005910 ORTHO05D007088 1.4e-25 119.8 91 72.5
Lsat_1_v5_gn_2_56160 Lactuca sativa HOM05D005910 ORTHO05D007088 1.4e-25 119.8 91 71.4
PSO478G2464 Papaver somniferum HOM05D005910 ORTHO05D007088 1.9e-25 119.4 92 69.6
Solyc10g079000.1 Solanum lycopersicum HOM05D005910 ORTHO05D007088 1.9e-25 119.4 107 64.5
Sopen10g029620 Solanum pennellii HOM05D005910 ORTHO05D007088 1.9e-25 119.4 107 64.5
PGSC0003DMG400011451 Solanum tuberosum HOM05D005910 ORTHO05D007088 1.9e-25 119.4 107 64.5
vmacro22120 Vaccinium macrocarpon HOM05D005910 ORTHO05D007088 1.9e-25 119.4 86 70.9
CAN.G960.19 Capsicum annuum HOM05D005910 ORTHO05D007088 3.2e-25 118.6 107 63.6
ATR0598G129 Amborella trichopoda HOM05D005910 ORTHO05D007088 4.2e-25 118.2 88 75.0
MSTRG.19925 Avicennia marina HOM05D005910 ORTHO05D007088 4.2e-25 118.2 107 62.6
Sc13g0002410 Simmondsia chinensis HOM05D005910 ORTHO05D007088 7.1e-25 117.5 98 66.3
MD14G1053500 Malus domestica HOM05D005910 ORTHO05D007088 1.2e-24 116.7 99 65.7
Oeu057587.1 Olea europaea HOM05D005910 ORTHO05D007088 1.2e-24 116.7 107 62.6
Pp3c21_11350 Physcomitrium patens HOM05D005910 ORTHO05D007088 1.2e-24 116.7 107 62.6
unitig_26.g10040 Utricularia gibba HOM05D005910 ORTHO05D007088 1.2e-24 116.7 106 60.4
SHI31753 Sapria himalayana HOM05D005910 ORTHO05D007088 2.7e-24 115.5 107 63.6
MD11G1118600 Malus domestica HOM05D005910 ORTHO05D007088 3.5e-24 115.2 99 65.7
Peaxi162Scf00463g00044 Petunia axillaris HOM05D005910 ORTHO05D007088 3.5e-24 115.2 107 60.7
Cfa020141 Carpinus fangiana HOM05D005910 ORTHO05D007088 4.6e-24 114.8 71 81.7
Aqoxy7G00427 Aquilegia oxysepala HOM05D005910 ORTHO05D007088 6.0e-24 114.4 89 68.5
AUR62012008 Chenopodium quinoa HOM05D005910 ORTHO05D007088 6.0e-24 114.4 107 60.7
Migut.J01866 Erythranthe guttata HOM05D005910 ORTHO05D007088 1.0e-23 113.6 104 62.5
Nitab4.5_0009361g0020 Nicotiana tabacum HOM05D005910 ORTHO05D007088 1.0e-23 113.6 107 59.8
Lsat_1_v5_gn_6_36581 Lactuca sativa HOM05D005910 ORTHO05D007088 1.3e-23 113.2 86 69.8
Nitab4.5_0000009g0230 Nicotiana tabacum HOM05D005910 ORTHO05D007088 1.3e-23 113.2 107 59.8
Potri.016G060300 Populus trichocarpa HOM05D005910 ORTHO05D007088 2.3e-23 112.5 79 73.4
AUR62015329 Chenopodium quinoa HOM05D005910 ORTHO05D007088 3.0e-23 112.1 107 58.9
EL10Ac3g06882 Beta vulgaris HOM05D005910 ORTHO05D007088 6.6e-23 110.9 107 58.9
HPP92_021275 Vanilla planifolia HOM05D005910 ORTHO05D007088 6.6e-23 110.9 106 56.6
Sed0026900 Sechium edule HOM05D005910 ORTHO05D007088 1.5e-22 109.8 101 61.4
MD00G1019800 Malus domestica HOM05D005910 ORTHO05D007088 7.3e-22 107.5 87 64.4
Mapoly0107s0023 Marchantia polymorpha HOM05D005910 ORTHO05D007088 1.6e-21 106.3 107 57.9
SMO367G0437 Selaginella moellendorffii HOM05D005910 ORTHO05D007088 2.8e-21 105.5 88 63.6
HanXRQChr14g0438251 Helianthus annuus HOM05D005910 ORTHO05D007088 4.8e-21 104.8 76 69.7
SEGI_08450 Sequoiadendron giganteum HOM05D005910 ORTHO05D007088 8.1e-21 104.0 81 67.9
MD03G1239200 Malus domestica HOM05D005910 ORTHO05D007088 3.1e-20 102.1 102 57.8
Zm00001eb215980 Zea mays HOM05D005910 ORTHO05D007088 3.1e-20 102.1 104 53.8
Os03g0721400 Oryza sativa ssp. japonica HOM05D005910 ORTHO05D007088 5.3e-20 101.3 87 59.8
Zm00001eb055560 Zea mays HOM05D005910 ORTHO05D007088 9.0e-20 100.5 101 55.4
CBR_g49549 Chara braunii HOM05D005910 ORTHO05D007088 3.4e-19 98.6 98 53.1
AagrBONN_evm.TU.Sc2ySwM_117.1513 Anthoceros agrestis HOM05D005910 ORTHO05D007088 4.5e-19 98.2 106 56.6
CSS0042896 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 7.6e-19 97.4 90 64.4
Glyma.07G000600 Glycine max HOM05D005910 ORTHO05D007088 7.1e-17 90.9 67 76.1
CSS0024230 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 1.2e-16 90.1 88 56.8
CDE06G1328 Ceratophyllum demersum HOM05D005910 ORTHO05D007088 1.6e-16 89.7 80 62.5
HanXRQChr03g0075461 Helianthus annuus HOM05D005910 ORTHO05D007088 2.7e-16 89.0 100 53.0
Dinv24042 Davidia involucrata HOM05D005910 ORTHO05D007088 1.0e-15 87.0 64 73.4
DCAR_009688 Daucus carota HOM05D005910 ORTHO05D007088 1.1e-14 83.6 63 63.5
Actinidia38594 Actinidia chinensis HOM05D005910 ORTHO05D007088 3.1e-12 75.5 79 59.5
AUR62043130 Chenopodium quinoa HOM05D005910 ORTHO05D007088 1.2e-11 73.6 73 60.3
Haze_26182 Corylus avellana HOM05D005910 ORTHO05D007088 9.9e-11 70.5 85 40.0
CSS0031188 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 1.7e-10 69.7 118 49.2


User provided reference genes

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