Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p019528 Quercus lobata HOM05D007682 ORTHO05D009690 2.2e-25 119.8 63 100.0
Haze_04118 Corylus avellana HOM05D007682 ORTHO05D009690 5.3e-24 115.2 63 95.2
CiPaw.08G159600 Carya illinoinensis HOM05D007682 ORTHO05D009690 7.7e-23 111.3 62 93.5
Cfa006654 Carpinus fangiana HOM05D007682 ORTHO05D009690 2.9e-22 109.4 63 92.1
Prupe.8G021600 Prunus persica HOM05D007682 ORTHO05D009690 2.1e-20 103.2 63 84.1
PGR031G1366 Punica granatum HOM05D007682 ORTHO05D009690 2.1e-20 103.2 63 84.1
Glyma.19G231600 Glycine max HOM05D007682 ORTHO05D009690 7.9e-20 101.3 63 82.5
TAR633G0769 Trochodendron aralioides HOM05D007682 ORTHO05D009690 1.0e-19 100.9 63 79.4
Gorai.007G301900 Gossypium raimondii HOM05D007682 ORTHO05D009690 1.4e-19 100.5 62 83.9
Gohir.A08G208100 Gossypium hirsutum HOM05D007682 ORTHO05D009690 2.3e-19 99.8 62 82.3
Glyma.03G234200 Glycine max HOM05D007682 ORTHO05D009690 3.0e-19 99.4 63 81.0
Hma1.2p1_0472F.1_g159680 Hydrangea macrophylla HOM05D007682 ORTHO05D009690 3.0e-19 99.4 62 80.6
Gohir.D11G279700 Gossypium hirsutum HOM05D007682 ORTHO05D009690 3.9e-19 99.0 62 82.3
Potri.005G023000 Populus trichocarpa HOM05D007682 ORTHO05D009690 3.9e-19 99.0 63 81.0
Eucgr.H03256 Eucalyptus grandis HOM05D007682 ORTHO05D009690 5.1e-19 98.6 63 77.8
Gohir.A11G269500 Gossypium hirsutum HOM05D007682 ORTHO05D009690 5.1e-19 98.6 62 82.3
MD10G1017700 Malus domestica HOM05D007682 ORTHO05D009690 5.1e-19 98.6 61 83.6
RcHm_v2.0_Chr6g0276771 Rosa chinensis HOM05D007682 ORTHO05D009690 5.1e-19 98.6 62 80.6
Phvul.006G088300 Phaseolus vulgaris HOM05D007682 ORTHO05D009690 6.7e-19 98.2 63 79.4
Manes.08G115600 Manihot esculenta HOM05D007682 ORTHO05D009690 8.8e-19 97.8 60 85.0
Oeu010924.1 Olea europaea HOM05D007682 ORTHO05D009690 8.8e-19 97.8 60 81.7
CSS0049840 Camellia sinensis var. sinensis HOM05D007682 ORTHO05D009690 1.1e-18 97.4 62 79.0
Peaxi162Scf00037g01515 Petunia axillaris HOM05D007682 ORTHO05D009690 1.1e-18 97.4 60 83.3
FAN20G0672 Fragaria x ananassa HOM05D007682 ORTHO05D009690 1.5e-18 97.1 62 79.0
FAN24G1339 Fragaria x ananassa HOM05D007682 ORTHO05D009690 1.5e-18 97.1 62 79.0
AUR62000737 Chenopodium quinoa HOM05D007682 ORTHO05D009690 2.0e-18 96.7 61 77.0
Nn4g25761 Nelumbo nucifera HOM05D007682 ORTHO05D009690 2.0e-18 96.7 61 82.0
SGA_v2.0_scaffold81G26104 Striga asiatica HOM05D007682 ORTHO05D009690 2.0e-18 96.7 62 79.0
Migut.N02098 Erythranthe guttata HOM05D007682 ORTHO05D009690 2.6e-18 96.3 60 83.3
BcaNung04745 Brassica carinata HOM05D007682 ORTHO05D009690 3.3e-18 95.9 58 84.5
Nitab4.5_0003113g0070 Nicotiana tabacum HOM05D007682 ORTHO05D009690 4.4e-18 95.5 60 81.7
Sed0011876 Sechium edule HOM05D007682 ORTHO05D009690 4.4e-18 95.5 61 80.3
THA.LOC104821730 Tarenaya hassleriana HOM05D007682 ORTHO05D009690 4.4e-18 95.5 61 78.7
arahy.Tifrunner.gnm1.ann1.P6132C Arachis hypogaea HOM05D007682 ORTHO05D009690 5.7e-18 95.1 63 76.2
CAN.G1273.42 Capsicum annuum HOM05D007682 ORTHO05D009690 5.7e-18 95.1 63 77.8
FAN15G0817 Fragaria x ananassa HOM05D007682 ORTHO05D009690 5.7e-18 95.1 62 79.0
Psat3g011680 Pisum sativum HOM05D007682 ORTHO05D009690 5.7e-18 95.1 63 79.4
ECA236G4368 Erigeron canadensis HOM05D000036 ORTHO05D000441 7.4e-18 94.7 62 77.4
Gohir.D08G224900 Gossypium hirsutum HOM05D007682 ORTHO05D009690 7.4e-18 94.7 61 78.7
PSO407G0292 Papaver somniferum HOM05D007682 ORTHO05D009690 7.4e-18 94.7 60 80.0
THA.LOC104818730 Tarenaya hassleriana HOM05D007682 ORTHO05D009690 7.4e-18 94.7 63 74.6
Thecc.05G315600 Theobroma cacao HOM05D007682 ORTHO05D009690 7.4e-18 94.7 62 79.0
AUR62005227 Chenopodium quinoa HOM05D007682 ORTHO05D009690 9.7e-18 94.4 61 73.8
A06p37270 Brassica napus HOM05D007682 ORTHO05D009690 1.3e-17 94.0 58 82.8
C07p41180 Brassica napus HOM05D007682 ORTHO05D009690 1.3e-17 94.0 58 82.8
BolC7t44646H Brassica oleracea HOM05D007682 ORTHO05D009690 1.3e-17 94.0 58 82.8
BraA06t26650Z Brassica rapa HOM05D007682 ORTHO05D009690 1.3e-17 94.0 58 82.8
Gorai.004G238900 Gossypium raimondii HOM05D007682 ORTHO05D009690 1.3e-17 94.0 61 78.7
Os12g0516700 Oryza sativa ssp. japonica HOM05D007682 ORTHO05D009690 1.3e-17 94.0 63 74.6
Solyc01g099930.3 Solanum lycopersicum HOM05D007682 ORTHO05D009690 1.3e-17 94.0 63 76.2
TPR.G1619 Trifolium pratense HOM05D007682 ORTHO05D009690 1.3e-17 94.0 63 77.8
Medtr7g112600 Medicago truncatula HOM05D007682 ORTHO05D009690 1.7e-17 93.6 60 81.7
Os12g0554000 Oryza sativa ssp. japonica HOM05D007682 ORTHO05D009690 1.7e-17 93.6 63 74.6
PSO170G1207 Papaver somniferum HOM05D007682 ORTHO05D009690 1.7e-17 93.6 60 78.3
Sp2g20980 Schrenkiella parvula HOM05D007682 ORTHO05D009690 1.7e-17 93.6 58 82.8
MSTRG.27972 Avicennia marina HOM05D007682 ORTHO05D009690 2.2e-17 93.2 57 82.5
arahy.Tifrunner.gnm1.ann1.S47DRU Arachis hypogaea HOM05D007682 ORTHO05D009690 2.8e-17 92.8 63 74.6
CARHR186340 Cardamine hirsuta HOM05D007682 ORTHO05D009690 2.8e-17 92.8 58 82.8
DCAR_022138 Daucus carota HOM05D007682 ORTHO05D009690 2.8e-17 92.8 63 73.0
Aa31LG11G9610 Aethionema arabicum HOM05D007682 ORTHO05D009690 3.7e-17 92.4 58 81.0
Duzib177G0692 Durio zibethinus HOM05D007682 ORTHO05D009690 3.7e-17 92.4 58 81.0
Lsat_1_v5_gn_7_72960 Lactuca sativa HOM05D007682 ORTHO05D009690 3.7e-17 92.4 62 75.8
GSVIVG01031165001 Vitis vinifera HOM05D000036 ORTHO05D000441 3.7e-17 92.4 60 80.0
Actinidia21502 Actinidia chinensis HOM05D007682 ORTHO05D009690 4.8e-17 92.0 61 77.0
Lalb_Chr15g0077471 Lupinus albus HOM05D007682 ORTHO05D009690 4.8e-17 92.0 63 76.2
Sabra05G0029000 Salix brachista HOM05D007682 ORTHO05D009690 4.8e-17 92.0 61 78.7
SMO367G0406 Selaginella moellendorffii HOM05D007682 ORTHO05D009690 4.8e-17 92.0 63 73.0
Atru.chr2.100 Acer truncatum HOM05D007682 ORTHO05D009690 8.2e-17 91.3 62 75.8
AT5G27860 Arabidopsis thaliana HOM05D007682 ORTHO05D009690 8.2e-17 91.3 58 81.0
SEGI_39810 Sequoiadendron giganteum HOM05D007682 ORTHO05D009690 8.2e-17 91.3 58 77.6
Dinv30837 Davidia involucrata HOM05D007682 ORTHO05D009690 1.1e-16 90.9 62 74.2
Sc16g0008750 Simmondsia chinensis HOM05D000036 ORTHO05D001038 1.1e-16 90.9 61 73.8
HanXRQChr11g0340111 Helianthus annuus HOM05D007682 ORTHO05D009690 1.8e-16 90.1 62 74.2
TWI56G1223 Tripterygium wilfordii HOM05D007682 ORTHO05D009690 1.8e-16 90.1 60 75.0
Lj1g0016295 Lotus japonicus HOM05D007682 ORTHO05D009690 2.4e-16 89.7 68 73.5
HPP92_010663 Vanilla planifolia HOM05D007682 ORTHO05D009690 2.4e-16 89.7 63 77.8
CSS0031357 Camellia sinensis var. sinensis HOM05D007682 ORTHO05D009690 4.1e-16 89.0 63 71.4
CsaV3_1G038640 Cucumis sativus L. HOM05D007682 ORTHO05D009690 4.1e-16 89.0 60 76.7
CDE11G0615 Ceratophyllum demersum HOM05D007682 ORTHO05D009690 6.9e-16 88.2 60 75.0
CDE05G1347 Ceratophyllum demersum HOM05D007682 ORTHO05D009690 1.2e-15 87.4 57 77.2
Cc02_g34370 Coffea canephora HOM05D007682 ORTHO05D009690 1.2e-15 87.4 58 75.9
Zm00001eb410110 Zea mays HOM05D007682 ORTHO05D009690 2.6e-15 86.3 62 74.2
MBI19_g44105_MAGBIO Magnolia biondii HOM05D007682 ORTHO05D009690 8.5e-14 81.3 53 75.5
AL6G39080 Arabidopsis lyrata HOM05D007682 ORTHO05D009690 1.1e-13 80.9 58 74.1
unitig_699.g19250 Utricularia gibba HOM05D007682 ORTHO05D009690 1.4e-13 80.5 49 83.7
Hund07111 Selenicereus undatus HOM05D007682 ORTHO05D009690 2.5e-13 79.7 82 54.9
Nitab4.5_0003497g0050 Nicotiana tabacum HOM05D007682 ORTHO05D009690 3.2e-13 79.3 51 78.4
Ah.06g189950 Amaranthus hybridus HOM05D007682 ORTHO05D009690 4.2e-13 79.0 50 76.0
EL10Ac4g09894 Beta vulgaris HOM05D007682 ORTHO05D009690 9.4e-13 77.8 50 74.0
ATR0693G225 Amborella trichopoda HOM05D007682 ORTHO05D009690 2.3e-11 73.2 51 70.6
HPP92_010684 Vanilla planifolia HOM05D007682 ORTHO05D009690 6.7e-11 71.6 60 66.7
DCAR_022140 Daucus carota HOM05D007682 ORTHO05D009690 1.7e-09 67.0 52 65.4
MBI19_g47767_MAGBIO Magnolia biondii HOM05D007682 ORTHO05D009690 6.3e-09 65.1 53 66.0
VMungo0540G1787 Vigna mungo HOM05D007682 ORTHO05D009690 3.8e-06 55.8 34 76.5


User provided reference genes

Program Settings