Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p018243 Quercus lobata HOM05D006698 ORTHO05D008415 1.2e-61 239.6 119 100.0
QL02p011012 Quercus lobata HOM05D006698 ORTHO05D008415 7.1e-49 197.2 197 58.4
Haze_22605 Corylus avellana HOM05D006698 ORTHO05D008415 1.1e-41 173.3 197 49.7
Cfa013924 Carpinus fangiana HOM05D006698 ORTHO05D008415 9.3e-41 170.2 197 49.2
CiPaw.09G133200 Carya illinoinensis HOM05D006698 ORTHO05D008415 8.1e-37 157.1 197 45.7
Lalb_Chr08g0238541 Lupinus albus HOM05D006698 ORTHO05D008415 1.1e-36 156.8 196 45.4
Prupe.1G368700 Prunus persica HOM05D006698 ORTHO05D008415 1.1e-36 156.8 197 45.2
Glyma.04G215400 Glycine max HOM05D006698 ORTHO05D008415 1.8e-36 156.0 197 44.7
Thecc.08G041000 Theobroma cacao HOM05D006698 ORTHO05D008415 1.8e-36 156.0 197 44.7
Gohir.D01G099300 Gossypium hirsutum HOM05D006698 ORTHO05D008415 2.4e-36 155.6 197 45.2
Gorai.002G124600 Gossypium raimondii HOM05D006698 ORTHO05D008415 2.4e-36 155.6 197 45.2
Manes.18G015700 Manihot esculenta HOM05D006698 ORTHO05D008415 5.3e-36 154.5 196 45.9
Gohir.A01G112500 Gossypium hirsutum HOM05D006698 ORTHO05D008415 1.5e-35 152.9 197 44.2
Atru.chr13.326 Acer truncatum HOM05D006698 ORTHO05D008415 2.0e-35 152.5 196 43.9
Ca_16921_v3 Cicer arietinum L. HOM05D006698 ORTHO05D008415 2.0e-35 152.5 197 43.1
Duzib093G0690 Durio zibethinus HOM05D006698 ORTHO05D008415 3.4e-35 151.8 197 43.7
CSS0038613 Camellia sinensis var. sinensis HOM05D006698 ORTHO05D008415 5.8e-35 151.0 197 44.2
Dinv31825 Davidia involucrata HOM05D006698 ORTHO05D008415 5.8e-35 151.0 197 42.6
FAN20G0171 Fragaria x ananassa HOM05D006698 ORTHO05D008415 7.6e-35 150.6 197 44.2
THA.LOC104823101 Tarenaya hassleriana HOM05D006698 ORTHO05D008415 7.6e-35 150.6 196 43.4
Ciclev10000799m.g Citrus clementina HOM05D006698 ORTHO05D008415 1.3e-34 149.8 197 44.2
MD09G1232000 Malus domestica HOM05D006698 ORTHO05D008415 1.3e-34 149.8 197 42.1
FvH4_2g38790 Fragaria vesca HOM05D006698 ORTHO05D008415 1.7e-34 149.4 197 43.7
FAN27G1564 Fragaria x ananassa HOM05D006698 ORTHO05D008415 1.7e-34 149.4 197 43.7
RcHm_v2.0_Chr6g0302501 Rosa chinensis HOM05D006698 ORTHO05D008415 2.2e-34 149.1 197 43.1
FAN15G2932 Fragaria x ananassa HOM05D006698 ORTHO05D008415 4.9e-34 147.9 197 43.1
Medtr3g095660 Medicago truncatula HOM05D006698 ORTHO05D008415 6.5e-34 147.5 197 42.1
Phvul.009G147800 Phaseolus vulgaris HOM05D006698 ORTHO05D008415 1.1e-33 146.7 197 42.1
PGR083G1075 Punica granatum HOM05D006698 ORTHO05D008415 1.1e-33 146.7 197 42.6
arahy.Tifrunner.gnm1.ann1.32JQZQ Arachis hypogaea HOM05D006698 ORTHO05D008415 1.4e-33 146.4 197 42.6
Lj1g0011928 Lotus japonicus HOM05D006698 ORTHO05D008415 1.4e-33 146.4 200 42.0
Cpa.g.sc14.105 Carica papaya HOM05D006698 ORTHO05D008415 1.9e-33 146.0 197 42.6
MELO3C003770.2 Cucumis melo HOM05D006698 ORTHO05D008415 2.5e-33 145.6 197 42.6
VMungo1309G0200 Vigna mungo HOM05D006698 ORTHO05D008415 3.2e-33 145.2 197 42.6
GSVIVG01009862001 Vitis vinifera HOM05D006698 ORTHO05D008415 3.2e-33 145.2 197 43.1
Lj4A795T33 Lonicera japonica HOM05D006698 ORTHO05D008415 4.2e-33 144.8 196 41.3
Nn6g32301 Nelumbo nucifera HOM05D006698 ORTHO05D008415 5.5e-33 144.4 197 42.6
Rhsim06G0023700 Rhododendron simsii HOM05D006698 ORTHO05D008415 5.5e-33 144.4 197 42.1
Potri.005G236400 Populus trichocarpa HOM05D006698 ORTHO05D008415 7.1e-33 144.1 197 41.1
Potri.002G025032 Populus trichocarpa HOM05D006698 ORTHO05D008415 9.3e-33 143.7 197 41.6
CsaV3_3G045670 Cucumis sativus L. HOM05D006698 ORTHO05D008415 2.7e-32 142.1 197 41.6
TPR.G18731 Trifolium pratense HOM05D006698 ORTHO05D008415 2.7e-32 142.1 197 39.6
arahy.Tifrunner.gnm1.ann1.HU0S2W Arachis hypogaea HOM05D006698 ORTHO05D008415 1.0e-31 140.2 197 41.1
BcaB06g27346 Brassica carinata HOM05D006698 ORTHO05D008415 1.3e-31 139.8 174 42.5
Sabra05G0182800 Salix brachista HOM05D006698 ORTHO05D008415 1.8e-31 139.4 197 40.1
TAR628G0086 Trochodendron aralioides HOM05D006698 ORTHO05D008415 1.8e-31 139.4 198 41.4
Oeu027550.1 Olea europaea HOM05D006698 ORTHO05D008415 3.9e-31 138.3 197 41.1
Oeu027551.1 Olea europaea HOM05D006698 ORTHO05D008415 3.9e-31 138.3 197 41.1
Cc10_g01920 Coffea canephora HOM05D006698 ORTHO05D008415 8.7e-31 137.1 197 41.6
DCAR_009935 Daucus carota HOM05D006698 ORTHO05D008415 8.7e-31 137.1 197 39.6
unitig_27.g25099 Utricularia gibba HOM05D006698 ORTHO05D008415 1.1e-30 136.7 161 46.6
vmacro21711 Vaccinium macrocarpon HOM05D006698 ORTHO05D008415 1.5e-30 136.3 197 38.6
TWI12G1415 Tripterygium wilfordii HOM05D006698 ORTHO05D008415 2.5e-30 135.6 196 41.8
SalBow8G5338 Salvia bowleyana HOM05D006698 ORTHO05D008415 3.3e-30 135.2 195 39.0
Ah.11g039450 Amaranthus hybridus HOM05D006698 ORTHO05D008415 5.7e-30 134.4 197 40.1
Hund24100 Selenicereus undatus HOM05D006698 ORTHO05D008415 9.6e-30 133.7 197 41.1
Sopen04g034840 Solanum pennellii HOM05D006698 ORTHO05D008415 9.6e-30 133.7 187 41.7
C04p46000 Brassica napus HOM05D006698 ORTHO05D008415 1.3e-29 133.3 197 38.1
MBI09_g13764_MAGBIO Magnolia biondii HOM05D006698 ORTHO05D008415 1.6e-29 132.9 198 39.4
Solyc04g081230.3 Solanum lycopersicum HOM05D006698 ORTHO05D008415 2.1e-29 132.5 187 41.2
AL7G50720 Arabidopsis lyrata HOM05D006698 ORTHO05D008415 2.8e-29 132.1 197 37.1
PSO210G1198 Papaver somniferum HOM05D006698 ORTHO05D008415 2.8e-29 132.1 198 39.9
PGSC0003DMG400003770 Solanum tuberosum HOM05D006698 ORTHO05D008415 2.8e-29 132.1 187 41.7
Nitab4.5_0001988g0020 Nicotiana tabacum HOM05D006698 ORTHO05D008415 3.7e-29 131.7 187 41.2
A04p12330 Brassica napus HOM05D006698 ORTHO05D008415 4.8e-29 131.3 197 38.1
BolC4t26182H Brassica oleracea HOM05D006698 ORTHO05D008415 4.8e-29 131.3 197 37.6
BraA04t16897Z Brassica rapa HOM05D006698 ORTHO05D008415 4.8e-29 131.3 197 38.1
CARHR262700 Cardamine hirsuta HOM05D006698 ORTHO05D008415 4.8e-29 131.3 197 37.1
ATR0147G003 Amborella trichopoda HOM05D006698 ORTHO05D008415 1.4e-28 129.8 164 48.2
Sed0002694 Sechium edule HOM05D006698 ORTHO05D008415 1.4e-28 129.8 189 40.2
CAN.G1271.13 Capsicum annuum HOM05D006698 ORTHO05D008415 1.8e-28 129.4 187 41.2
PSO170G6283 Papaver somniferum HOM05D006698 ORTHO05D008415 1.8e-28 129.4 198 38.9
EL10Ac1g02260 Beta vulgaris HOM05D006698 ORTHO05D008415 2.4e-28 129.0 197 39.1
Eucgr.F01632 Eucalyptus grandis HOM05D006698 ORTHO05D008415 2.4e-28 129.0 197 38.6
CANSAT35G1394 Cannabis sativa HOM05D006698 ORTHO05D008415 3.1e-28 128.6 195 41.0
Peaxi162Scf00287g01719 Petunia axillaris HOM05D006698 ORTHO05D008415 4.1e-28 128.3 187 40.6
Sp7g02400 Schrenkiella parvula HOM05D006698 ORTHO05D008415 5.3e-28 127.9 197 36.0
MSTRG.22331 Avicennia marina HOM05D006698 ORTHO05D008415 6.9e-28 127.5 184 38.6
Zm00001eb067290 Zea mays HOM05D006698 ORTHO05D008415 1.2e-27 126.7 189 40.2
Carub.0007s3635 Capsella rubella HOM05D006698 ORTHO05D008415 1.5e-27 126.3 197 35.5
AT5G39590 Arabidopsis thaliana HOM05D006698 ORTHO05D008415 2.0e-27 125.9 197 35.5
CDE09G0091 Ceratophyllum demersum HOM05D006698 ORTHO05D008415 2.0e-27 125.9 197 38.6
SGA_v2.0_scaffold47G17495 Striga asiatica HOM05D006698 ORTHO05D008415 2.0e-27 125.9 197 37.6
Migut.N03146 Erythranthe guttata HOM05D006698 ORTHO05D008415 2.6e-27 125.6 196 37.8
Aqoxy5G01450 Aquilegia oxysepala HOM05D006698 ORTHO05D008415 1.0e-26 123.6 197 37.6
AUR62035724 Chenopodium quinoa HOM05D006698 ORTHO05D008415 1.0e-26 123.6 180 39.4
Actinidia16965 Actinidia chinensis HOM05D006698 ORTHO05D008415 1.3e-26 123.2 74 75.7
PSO170G5361 Papaver somniferum HOM05D006698 ORTHO05D008415 1.7e-26 122.9 196 37.8
PSO210G5790 Papaver somniferum HOM05D006698 ORTHO05D008415 1.7e-26 122.9 196 37.2
HPP92_014935 Vanilla planifolia HOM05D006698 ORTHO05D008415 1.7e-26 122.9 195 35.9
Os04g0663700 Oryza sativa ssp. japonica HOM05D006698 ORTHO05D008415 2.2e-26 122.5 197 37.6
SHI08084 Sapria himalayana HOM05D006698 ORTHO05D008415 2.2e-26 122.5 197 37.6
AUR62035437 Chenopodium quinoa HOM05D006698 ORTHO05D008415 2.9e-26 122.1 179 39.1
Aa31LG9G16490 Aethionema arabicum HOM05D006698 ORTHO05D008415 1.9e-25 119.4 211 34.6
HanXRQChr04g0101141 Helianthus annuus HOM05D006698 ORTHO05D008415 3.2e-25 118.6 195 38.5
Lsat_1_v5_gn_2_11660 Lactuca sativa HOM05D006698 ORTHO05D008415 7.2e-25 117.5 192 37.0
ECA238G1455 Erigeron canadensis HOM05D006698 ORTHO05D008415 1.3e-23 113.2 192 37.0
QL03p018220 Quercus lobata HOM05D006698 ORTHO05D008415 2.3e-23 112.5 58 93.1
Thhalv10027724m.g Eutrema salsugineum HOM05D006698 ORTHO05D008415 3.0e-23 112.1 74 68.9
SEGI_26467 Sequoiadendron giganteum HOM05D006698 ORTHO05D008415 2.5e-22 109.0 197 34.0
Pp3c16_7090 Physcomitrium patens HOM05D006698 ORTHO05D008415 1.2e-19 100.1 198 32.3
Mapoly0043s0042 Marchantia polymorpha HOM05D006698 ORTHO05D008415 1.7e-18 96.3 74 58.1
Pp3c5_11350 Physcomitrium patens HOM05D006698 ORTHO05D008415 1.7e-18 96.3 198 30.8
SMO145G0265 Selaginella moellendorffii HOM05D006698 ORTHO05D008415 1.7e-18 96.3 74 56.8
ClCG05G018510 Citrullus lanatus HOM05D006698 ORTHO05D008415 1.4e-15 86.7 197 30.5
AagrBONN_evm.TU.Sc2ySwM_344.812 Anthoceros agrestis HOM05D006698 ORTHO05D008415 2.2e-13 79.3 74 55.4
AagrBONN_evm.TU.Sc2ySwM_344.842 Anthoceros agrestis HOM05D006698 ORTHO05D008415 2.4e-12 75.9 67 56.7
Actinidia16966 Actinidia chinensis HOM05D006698 ORTHO05D008415 2.7e-08 62.4 45 57.8
Glyma.06G150801 Glycine max HOM05D006698 ORTHO05D008415 1.8e-07 59.7 45 53.3
Duzib116G0861 Durio zibethinus HOM05D006698 ORTHO05D008415 3.0e-07 58.9 52 53.8
Sc15g0005110 Simmondsia chinensis HOM05D006698 ORTHO05D008415 3.9e-07 58.5 55 54.5


User provided reference genes

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