Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p017988 Quercus lobata HOM05D000125 ORTHO05D000120 7.1e-77 290.4 137 100.0
QL03p007034 Quercus lobata HOM05D000125 ORTHO05D000120 4.5e-39 164.9 170 53.5
QL03p007619 Quercus lobata HOM05D000125 ORTHO05D000120 2.2e-38 162.5 167 51.5
QL05p055394 Quercus lobata HOM05D000125 ORTHO05D000120 1.4e-37 159.8 169 51.5
QL09p047139 Quercus lobata HOM05D000125 ORTHO05D000120 5.5e-37 157.9 146 58.2
QL05p012534 Quercus lobata HOM05D000125 ORTHO05D000120 1.2e-36 156.8 174 49.4
QL03p007579 Quercus lobata HOM05D000125 ORTHO05D000120 3.9e-35 151.8 167 49.1
QL09p047154 Quercus lobata HOM05D000125 ORTHO05D000120 3.3e-34 148.7 175 50.3
QL09p047064 Quercus lobata HOM05D000125 ORTHO05D000120 5.7e-34 147.9 180 48.9
QL09p047056 Quercus lobata HOM05D000125 ORTHO05D000120 1.7e-33 146.4 121 62.8
QL03p004389 Quercus lobata HOM05D000125 ORTHO05D000120 3.7e-33 145.2 172 48.8
QL09p047279 Quercus lobata HOM05D000125 ORTHO05D000120 1.4e-32 143.3 175 49.1
QL03p006577 Quercus lobata HOM05D000125 ORTHO05D000120 5.3e-32 141.4 167 46.1
QL03p007490 Quercus lobata HOM05D000125 ORTHO05D000120 1.5e-31 139.8 167 46.1
QL03p006702 Quercus lobata HOM05D000125 ORTHO05D000120 3.5e-31 138.7 167 46.7
QL05p015151 Quercus lobata HOM05D000125 ORTHO05D000120 5.0e-30 134.8 167 46.7
QL03p007536 Quercus lobata HOM05D000125 ORTHO05D000120 1.1e-29 133.7 98 66.3
QL03p004456 Quercus lobata HOM05D000125 ORTHO05D000120 3.2e-29 132.1 175 46.3
QL03p074516 Quercus lobata HOM05D000125 ORTHO05D000120 3.2e-29 132.1 174 43.7
QL03p006698 Quercus lobata HOM05D000125 ORTHO05D000120 7.2e-29 131.0 167 45.5
QL03p004058 Quercus lobata HOM05D000125 ORTHO05D000120 6.7e-27 124.4 175 45.7
QL12p030745 Quercus lobata HOM05D000125 ORTHO05D000120 3.3e-26 122.1 173 46.2
QL03p074351 Quercus lobata HOM05D000125 ORTHO05D000120 4.4e-26 121.7 121 59.5
QL11p003228 Quercus lobata HOM05D000125 ORTHO05D000120 2.4e-24 115.9 176 43.2
QL11p014290 Quercus lobata HOM05D000125 ORTHO05D000120 2.2e-22 109.4 120 54.2
QL11p014934 Quercus lobata HOM05D000125 ORTHO05D000120 2.2e-22 109.4 120 54.2
QL07p009736 Quercus lobata HOM05D000125 ORTHO05D000120 6.5e-22 107.8 115 53.0
QL09p001329 Quercus lobata HOM05D000125 ORTHO05D000120 6.5e-22 107.8 121 54.5
Haze_04218 Corylus avellana HOM05D000125 ORTHO05D000120 1.4e-19 100.1 146 44.5
QL05p051439 Quercus lobata HOM05D000010 ORTHO05D338178 2.0e-18 96.3 71 69.0
QL03p006292 Quercus lobata HOM05D000125 ORTHO05D000120 5.7e-18 94.7 124 46.8
Haze_04189 Corylus avellana HOM05D000125 ORTHO05D000120 1.3e-17 93.6 117 44.4
QL03p007957 Quercus lobata HOM05D000125 ORTHO05D000120 1.3e-17 93.6 187 34.2
Haze_04188 Corylus avellana HOM05D000125 ORTHO05D000120 2.2e-17 92.8 117 44.4
Haze_04187 Corylus avellana HOM05D000125 ORTHO05D000120 2.8e-17 92.4 179 36.3
QL03p007149 Quercus lobata HOM05D000125 ORTHO05D000120 4.8e-17 91.7 176 35.2
Haze_04180 Corylus avellana HOM05D000125 ORTHO05D000120 8.3e-17 90.9 177 38.4
QL03p005315 Quercus lobata HOM05D000125 ORTHO05D000120 7.0e-16 87.8 118 41.5
QL03p007125 Quercus lobata HOM05D000254 ORTHO05D000165 7.0e-16 87.8 124 41.1
CiPaw.07G018400 Carya illinoinensis HOM05D000125 ORTHO05D000120 1.6e-15 86.7 127 40.9
QL03p006201 Quercus lobata HOM05D001619 ORTHO05D001541 3.5e-15 85.5 104 44.2
QL03p074230 Quercus lobata HOM05D000677 ORTHO05D000727 5.9e-15 84.7 150 40.0
QL01p002329 Quercus lobata HOM05D000125 ORTHO05D000120 3.8e-14 82.0 167 34.1
QL10p019154 Quercus lobata HOM05D000125 ORTHO05D000120 1.1e-13 80.5 87 51.7
QL03p012897 Quercus lobata HOM05D000125 ORTHO05D000120 4.2e-13 78.6 56 76.8
CiPaw.10G124000 Carya illinoinensis HOM05D000125 ORTHO05D000807 7.2e-13 77.8 84 42.9
CiPaw.07G008600 Carya illinoinensis HOM05D000125 ORTHO05D000120 1.2e-12 77.0 115 42.6
CiPaw.08G162300 Carya illinoinensis HOM05D000125 ORTHO05D000120 4.7e-12 75.1 118 41.5
TWI74G0807 Tripterygium wilfordii HOM05D000125 ORTHO05D000120 8.0e-12 74.3 118 39.0
CiPaw.08G162400 Carya illinoinensis HOM05D000125 ORTHO05D000120 5.2e-11 71.6 119 38.7
Sabra16G0061100 Salix brachista HOM05D000125 ORTHO05D000120 6.8e-11 71.2 117 36.8
Potri.016G047200 Populus trichocarpa HOM05D000125 ORTHO05D000120 8.8e-11 70.9 117 34.2
QL03p007966 Quercus lobata HOM05D000125 ORTHO05D000807 8.8e-11 70.9 142 33.8
Haze_19282 Corylus avellana HOM05D000125 ORTHO05D000120 1.2e-10 70.5 137 37.2
Duzib106G1937 Durio zibethinus HOM05D000125 ORTHO05D000120 1.2e-10 70.5 118 35.6
Potri.016G044800 Populus trichocarpa HOM05D000125 ORTHO05D000120 1.5e-10 70.1 117 32.5
Potri.016G044732 Populus trichocarpa HOM05D000125 ORTHO05D000120 2.0e-10 69.7 117 33.3
Potri.016G044432 Populus trichocarpa HOM05D000125 ORTHO05D000120 2.6e-10 69.3 117 35.0
Potri.016G047000 Populus trichocarpa HOM05D000125 ORTHO05D000120 4.4e-10 68.6 117 33.3
Potri.016G047300 Populus trichocarpa HOM05D000125 ORTHO05D000120 5.7e-10 68.2 117 34.2
Potri.016G057800 Populus trichocarpa HOM05D000125 ORTHO05D000120 9.8e-10 67.4 117 32.5
CiPaw.08G165900 Carya illinoinensis HOM05D000125 ORTHO05D000807 2.2e-09 66.2 119 39.5
Potri.016G044600 Populus trichocarpa HOM05D000125 ORTHO05D000120 2.2e-09 66.2 117 32.5
Cpa.g.sc681.4 Carica papaya HOM05D000125 ORTHO05D000120 2.8e-09 65.9 124 35.5
COL.COLO4_08796 Corchorus olitorius HOM05D000125 ORTHO05D000120 3.7e-09 65.5 168 29.2
Haze_19284 Corylus avellana HOM05D000125 ORTHO05D000120 3.7e-09 65.5 115 37.4
QL03p073969 Quercus lobata HOM05D000070 ORTHO05D006344 1.4e-08 63.5 115 38.3
Duzib114G1013 Durio zibethinus HOM05D000125 ORTHO05D000120 1.8e-08 63.2 117 34.2
Gohir.D10G222950 Gossypium hirsutum HOM05D000125 ORTHO05D000120 1.8e-08 63.2 170 25.9
Duzib106G1761 Durio zibethinus HOM05D000125 ORTHO05D000120 3.1e-08 62.4 119 34.5
Cpa.g.sc12.42 Carica papaya HOM05D000125 ORTHO05D000120 4.1e-08 62.0 124 33.1
CiPaw.08G119200 Carya illinoinensis HOM05D000125 ORTHO05D000120 4.1e-08 62.0 118 38.1
Potri.016G044200 Populus trichocarpa HOM05D000125 ORTHO05D000120 4.1e-08 62.0 117 29.9
COL.COLO4_16601 Corchorus olitorius HOM05D000125 ORTHO05D000120 7.0e-08 61.2 112 39.3
Gohir.D06G173300 Gossypium hirsutum HOM05D000125 ORTHO05D000120 7.0e-08 61.2 167 28.7
Gorai.010G202500 Gossypium raimondii HOM05D000125 ORTHO05D000120 7.0e-08 61.2 167 28.7
Gorai.011G253500 Gossypium raimondii HOM05D000125 ORTHO05D000120 7.0e-08 61.2 167 25.7
Gorai.011G253800 Gossypium raimondii HOM05D000125 ORTHO05D000120 9.1e-08 60.8 167 25.1
CiPaw.15G184800 Carya illinoinensis HOM05D000125 ORTHO05D000120 1.2e-07 60.5 149 30.9
Cpa.g.sc12.39 Carica papaya HOM05D000125 ORTHO05D000120 1.6e-07 60.1 124 31.5
COL.COLO4_14649 Corchorus olitorius HOM05D000125 ORTHO05D000120 1.6e-07 60.1 120 32.5
Cpa.g.sc681.3 Carica papaya HOM05D000125 ORTHO05D000120 2.0e-07 59.7 136 31.6
CiPaw.09G029900 Carya illinoinensis HOM05D000125 ORTHO05D000120 2.0e-07 59.7 114 29.8
Gohir.A10G215640 Gossypium hirsutum HOM05D000125 ORTHO05D000120 2.0e-07 59.7 121 32.2
COL.COLO4_16584 Corchorus olitorius HOM05D000125 ORTHO05D000120 3.5e-07 58.9 138 31.9
Duzib251G0454 Durio zibethinus HOM05D000125 ORTHO05D000120 3.5e-07 58.9 114 32.5
Gohir.A10G213800 Gossypium hirsutum HOM05D000125 ORTHO05D000120 3.5e-07 58.9 170 25.3
Gohir.A02G013101 Gossypium hirsutum HOM05D000125 ORTHO05D000120 4.5e-07 58.5 131 29.0
Gohir.D10G217300 Gossypium hirsutum HOM05D000125 ORTHO05D000120 4.5e-07 58.5 116 33.6
COL.COLO4_27081 Corchorus olitorius HOM05D000125 ORTHO05D000120 5.9e-07 58.2 117 32.5
Gorai.005G019200 Gossypium raimondii HOM05D000125 ORTHO05D000120 5.9e-07 58.2 138 33.3
Gohir.A09G225300 Gossypium hirsutum HOM05D000125 ORTHO05D000120 7.7e-07 57.8 111 34.2
Gohir.A10G214100 Gossypium hirsutum HOM05D000125 ORTHO05D000120 7.7e-07 57.8 167 25.7
Haze_19311 Corylus avellana HOM05D000125 ORTHO05D000120 1.0e-06 57.4 59 47.5
Gohir.A10G209000 Gossypium hirsutum HOM05D000125 ORTHO05D000120 1.0e-06 57.4 116 33.6
Gohir.A10G214000 Gossypium hirsutum HOM05D000125 ORTHO05D000120 1.0e-06 57.4 117 35.0
Gohir.D09G227000 Gossypium hirsutum HOM05D000125 ORTHO05D000120 1.0e-06 57.4 117 33.3
Gohir.D10G222900 Gossypium hirsutum HOM05D000125 ORTHO05D000120 1.0e-06 57.4 166 26.5
Thecc.05G289300 Theobroma cacao HOM05D000125 ORTHO05D000120 1.0e-06 57.4 121 31.4
COL.COLO4_10321 Corchorus olitorius HOM05D000125 ORTHO05D000120 1.3e-06 57.0 108 34.3
Cpa.g.sc12.43 Carica papaya HOM05D000125 ORTHO05D000120 1.7e-06 56.6 119 33.6
COL.COLO4_38431 Corchorus olitorius HOM05D000125 ORTHO05D000120 1.7e-06 56.6 120 34.2
Gorai.006G248900 Gossypium raimondii HOM05D000125 ORTHO05D000120 1.7e-06 56.6 115 33.0
TWI39G0227 Tripterygium wilfordii HOM05D000125 ORTHO05D000120 1.7e-06 56.6 130 33.8
Thecc.10G010400 Theobroma cacao HOM05D000125 ORTHO05D000120 2.3e-06 56.2 112 35.7
Cpa.g.sc12.41 Carica papaya HOM05D000125 ORTHO05D000120 2.9e-06 55.8 126 31.0
COL.COLO4_04761 Corchorus olitorius HOM05D000125 ORTHO05D000120 2.9e-06 55.8 89 36.0
Gorai.011G253700 Gossypium raimondii HOM05D000125 ORTHO05D000120 2.9e-06 55.8 175 25.1
Thecc.10G050200 Theobroma cacao HOM05D000125 ORTHO05D000120 2.9e-06 55.8 112 35.7
Gohir.D02G015366 Gossypium hirsutum HOM05D000125 ORTHO05D000120 3.8e-06 55.5 116 33.6
Thecc.10G051300 Theobroma cacao HOM05D000125 ORTHO05D000120 3.8e-06 55.5 117 31.6
COL.COLO4_16602 Corchorus olitorius HOM05D000125 ORTHO05D000120 5.0e-06 55.1 175 26.3
Thecc.10G050800 Theobroma cacao HOM05D000125 ORTHO05D000120 5.0e-06 55.1 115 31.3
COL.COLO4_36154 Corchorus olitorius HOM05D000125 ORTHO05D000120 6.6e-06 54.7 117 31.6
Gohir.A10G215528 Gossypium hirsutum HOM05D000125 ORTHO05D000120 6.6e-06 54.7 121 32.2
Gorai.011G253600 Gossypium raimondii HOM05D000125 ORTHO05D000120 6.6e-06 54.7 113 29.2
COL.COLO4_29323 Corchorus olitorius HOM05D000125 ORTHO05D000120 8.6e-06 54.3 120 32.5
Gohir.D02G015400 Gossypium hirsutum HOM05D000125 ORTHO05D000120 8.6e-06 54.3 109 35.8
Gorai.011G242900 Gossypium raimondii HOM05D000125 ORTHO05D000120 8.6e-06 54.3 117 33.3
Thecc.10G051500 Theobroma cacao HOM05D000125 ORTHO05D000120 8.6e-06 54.3 117 29.1


User provided reference genes

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