Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p016561 Quercus lobata HOM05D000264 ORTHO05D000152 1.2e-97 359.8 179 100.0
QL03p016676 Quercus lobata HOM05D000264 ORTHO05D000152 3.2e-77 292.0 206 74.8
QL03p016731 Quercus lobata HOM05D000264 ORTHO05D000152 3.2e-77 292.0 206 74.8
QL03p016541 Quercus lobata HOM05D000264 ORTHO05D000152 6.9e-40 167.9 198 51.5
QL03p016466 Quercus lobata HOM05D000264 ORTHO05D000152 6.1e-36 154.8 199 50.3
QL03p016328 Quercus lobata HOM05D000264 ORTHO05D000152 3.0e-35 152.5 177 53.1
QL03p016358 Quercus lobata HOM05D000264 ORTHO05D000152 7.7e-31 137.9 199 48.2
QL03p016821 Quercus lobata HOM05D000264 ORTHO05D000152 2.2e-30 136.3 205 43.9
QL03p027958 Quercus lobata HOM05D000264 ORTHO05D000152 3.8e-30 135.6 195 45.6
QL03p027806 Quercus lobata HOM05D000264 ORTHO05D000152 1.6e-23 113.6 195 41.0
Duzib177G0874 Durio zibethinus HOM05D000264 ORTHO05D000152 5.2e-19 98.6 161 39.1
Manes.09G150800 Manihot esculenta HOM05D000264 ORTHO05D000152 2.6e-18 96.3 154 39.6
QL03p027896 Quercus lobata HOM05D000264 ORTHO05D000152 7.0e-16 88.2 166 38.0
Duzib177G0309 Durio zibethinus HOM05D000264 ORTHO05D000152 1.6e-15 87.0 151 39.1
Dinv29924 Davidia involucrata HOM05D000264 ORTHO05D000152 2.2e-14 83.2 162 37.0
QL09p045542 Quercus lobata HOM05D000264 ORTHO05D000152 6.5e-14 81.6 169 34.9
CANSAT78G1487 Cannabis sativa HOM05D000264 ORTHO05D000152 1.1e-13 80.9 143 42.0
Dinv14086 Davidia involucrata HOM05D000096 ORTHO05D000045 1.1e-13 80.9 162 36.4
Dinv29918 Davidia involucrata HOM05D000264 ORTHO05D000152 1.5e-13 80.5 159 34.6
FvH4_1g18590 Fragaria vesca HOM05D000264 ORTHO05D000152 8.0e-12 74.7 180 34.4
FAN19G0588 Fragaria x ananassa HOM05D000264 ORTHO05D000152 8.0e-12 74.7 180 34.4
Prupe.7G182300 Prunus persica HOM05D000264 ORTHO05D000152 8.0e-12 74.7 178 30.9
CANSAT78G2268 Cannabis sativa HOM05D000264 ORTHO05D000152 4.0e-11 72.4 150 38.0
Dinv14025 Davidia involucrata HOM05D000001 ORTHO05D000003 4.0e-11 72.4 197 28.4
CANSAT78G0525 Cannabis sativa HOM05D000264 ORTHO05D000152 6.8e-11 71.6 138 37.7
Sed0022421 Sechium edule HOM05D000264 ORTHO05D000152 6.8e-11 71.6 118 39.0
FAN21G2481 Fragaria x ananassa HOM05D000264 ORTHO05D000152 8.8e-11 71.2 167 32.9
MD02G1116900 Malus domestica HOM05D000264 ORTHO05D000152 8.8e-11 71.2 153 30.1
FvH4_1g10430 Fragaria vesca HOM05D000264 ORTHO05D000152 1.2e-10 70.9 155 34.8
RcHm_v2.0_Chr2g0109381 Rosa chinensis HOM05D000264 ORTHO05D000152 1.2e-10 70.9 183 33.3
CANSAT25G0846 Cannabis sativa HOM05D000264 ORTHO05D000152 1.5e-10 70.5 168 29.2
Eucgr.H02695 Eucalyptus grandis HOM05D000264 ORTHO05D000152 1.5e-10 70.5 201 30.8
FvH4_3g16160 Fragaria vesca HOM05D000264 ORTHO05D000152 1.5e-10 70.5 167 32.9
QL03p028215 Quercus lobata HOM05D000264 ORTHO05D000152 1.5e-10 70.5 157 35.0
CANSAT64G1402 Cannabis sativa HOM05D000264 ORTHO05D000152 2.6e-10 69.7 167 30.5
Thecc.05G278000 Theobroma cacao HOM05D000264 ORTHO05D000152 2.6e-10 69.7 104 42.3
ClCG02G016840 Citrullus lanatus HOM05D000264 ORTHO05D000152 3.4e-10 69.3 104 41.3
FAN28G1654 Fragaria x ananassa HOM05D000264 ORTHO05D000152 4.4e-10 68.9 180 32.8
MELO3C004399.2 Cucumis melo HOM05D000264 ORTHO05D000152 7.5e-10 68.2 210 30.5
FAN26G1698 Fragaria x ananassa HOM05D000264 ORTHO05D000152 7.5e-10 68.2 181 33.1
Dinv14027 Davidia involucrata HOM05D000264 ORTHO05D000152 9.8e-10 67.8 145 33.1
Dinv29921 Davidia involucrata HOM05D000264 ORTHO05D000152 1.3e-09 67.4 155 29.7
Gorai.012G179800 Gossypium raimondii HOM05D000264 ORTHO05D000152 1.3e-09 67.4 164 32.9
CANSAT78G2137 Cannabis sativa HOM05D000264 ORTHO05D000152 1.7e-09 67.0 137 35.8
FAN26G1085 Fragaria x ananassa HOM05D000264 ORTHO05D000152 1.7e-09 67.0 174 29.3
CANSAT78G2263 Cannabis sativa HOM05D000264 ORTHO05D000152 2.2e-09 66.6 139 35.3
CiPaw.01G049800 Carya illinoinensis HOM05D000264 ORTHO05D000152 2.2e-09 66.6 147 32.7
QL10p054050 Quercus lobata HOM05D000264 ORTHO05D000152 2.2e-09 66.6 147 30.6
CANSAT25G2290 Cannabis sativa HOM05D000264 ORTHO05D000152 2.8e-09 66.2 168 29.2
ECA247G3275 Erigeron canadensis HOM05D000264 ORTHO05D000152 3.7e-09 65.9 145 32.4
Hma1.2p1_1276F.1_g272240 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 3.7e-09 65.9 170 30.0
QL03p028233 Quercus lobata HOM05D000264 ORTHO05D000152 4.9e-09 65.5 62 53.2
RcHm_v2.0_Chr7g0237491 Rosa chinensis HOM05D000264 ORTHO05D000152 4.9e-09 65.5 147 30.6
FvH4_1g10402 Fragaria vesca HOM05D000264 ORTHO05D001690 6.3e-09 65.1 146 29.5
MD05G1212100 Malus domestica HOM05D000264 ORTHO05D000152 6.3e-09 65.1 211 29.9
Prupe.4G144800 Prunus persica HOM05D000264 ORTHO05D000152 8.3e-09 64.7 147 36.1
QL03p028184 Quercus lobata HOM05D000264 ORTHO05D000152 8.3e-09 64.7 189 30.2
Thecc.05G278100 Theobroma cacao HOM05D000264 ORTHO05D000152 8.3e-09 64.7 136 33.8
Gohir.D08G233766 Gossypium hirsutum HOM05D000264 ORTHO05D000152 1.4e-08 63.9 167 33.5
Nitab4.5_0001587g0100 Nicotiana tabacum HOM05D000264 ORTHO05D000152 1.4e-08 63.9 143 34.3
Prupe.4G145100 Prunus persica HOM05D000264 ORTHO05D000152 1.4e-08 63.9 147 34.0
arahy.Tifrunner.gnm1.ann1.S75E27 Arachis hypogaea HOM05D000264 ORTHO05D000152 1.8e-08 63.5 155 30.3
Manes.12G005300 Manihot esculenta HOM05D000264 ORTHO05D000152 1.8e-08 63.5 56 57.1
Ciclev10006407m.g Citrus clementina HOM05D000264 ORTHO05D000152 2.4e-08 63.2 146 28.1
FAN11G3759 Fragaria x ananassa HOM05D000264 ORTHO05D000152 2.4e-08 63.2 180 32.8
QL02p020235 Quercus lobata HOM05D000264 ORTHO05D000152 2.4e-08 63.2 64 54.7
QL02p020291 Quercus lobata HOM05D000264 ORTHO05D000152 2.4e-08 63.2 64 54.7
arahy.Tifrunner.gnm1.ann1.02EYZX Arachis hypogaea HOM05D000264 ORTHO05D000152 3.1e-08 62.8 155 29.7
Ciclev10004701m.g Citrus clementina HOM05D000264 ORTHO05D000152 3.1e-08 62.8 169 26.0
FvH4_1g10400 Fragaria vesca HOM05D000264 ORTHO05D000152 3.1e-08 62.8 151 27.2
FAN19G0684 Fragaria x ananassa HOM05D000264 ORTHO05D000152 3.1e-08 62.8 151 27.2
Gorai.012G179100 Gossypium raimondii HOM05D000264 ORTHO05D000152 3.1e-08 62.8 164 32.3
Hma1.2p1_1193F.1_g265580 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 3.1e-08 62.8 139 29.5
Ciclev10004518m.g Citrus clementina HOM05D000264 ORTHO05D000152 4.1e-08 62.4 137 29.9
Duzib212G0970 Durio zibethinus HOM05D000264 ORTHO05D000152 4.1e-08 62.4 155 31.0
Hma1.2p1_1193F.1_g265640 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 4.1e-08 62.4 170 30.6
QL02p099732 Quercus lobata HOM05D000264 ORTHO05D000152 4.1e-08 62.4 65 52.3
vmacro04094 Vaccinium macrocarpon HOM05D000264 ORTHO05D000152 4.1e-08 62.4 151 30.5
Ciclev10004698m.g Citrus clementina HOM05D000264 ORTHO05D000152 5.4e-08 62.0 149 28.2
FAN16G3628 Fragaria x ananassa HOM05D000264 ORTHO05D000152 7.0e-08 61.6 151 33.8
Aqoxy1G04212 Aquilegia oxysepala HOM05D000264 ORTHO05D000152 9.1e-08 61.2 148 30.4
arahy.Tifrunner.gnm1.ann1.98V0PV Arachis hypogaea HOM05D000992 ORTHO05D006704 9.1e-08 61.2 162 29.0
CANSAT54G1172 Cannabis sativa HOM05D000264 ORTHO05D000152 9.1e-08 61.2 58 56.9
FvH4_1g10390 Fragaria vesca HOM05D000264 ORTHO05D000152 9.1e-08 61.2 153 28.8
Nitab4.5_0008566g0050 Nicotiana tabacum HOM05D000264 ORTHO05D000152 9.1e-08 61.2 150 31.3
QL10p052455 Quercus lobata HOM05D000264 ORTHO05D000152 9.1e-08 61.2 141 31.2
CANSAT25G3901 Cannabis sativa HOM05D000264 ORTHO05D000152 1.6e-07 60.5 152 28.9
THA.LOC104803112 Tarenaya hassleriana HOM05D000264 ORTHO05D000152 1.6e-07 60.5 163 28.2
Ciclev10004657m.g Citrus clementina HOM05D000264 ORTHO05D000152 2.0e-07 60.1 149 27.5
Dinv14029 Davidia involucrata HOM05D000264 ORTHO05D000152 2.7e-07 59.7 145 31.0
Dinv14030 Davidia involucrata HOM05D000264 ORTHO05D000152 2.7e-07 59.7 196 26.5
Lj6P649T13 Lonicera japonica HOM05D000264 ORTHO05D000152 2.7e-07 59.7 150 33.3
CANSAT78G1322 Cannabis sativa HOM05D000264 ORTHO05D000152 3.5e-07 59.3 142 33.8
CiPaw.01G190700 Carya illinoinensis HOM05D000264 ORTHO05D000152 3.5e-07 59.3 165 27.9
Duzib212G0755 Durio zibethinus HOM05D000264 ORTHO05D000152 3.5e-07 59.3 153 31.4
Nn1g06590 Nelumbo nucifera HOM05D000264 ORTHO05D000152 3.5e-07 59.3 164 29.3
RcHm_v2.0_Chr7g0213401 Rosa chinensis HOM05D000264 ORTHO05D000152 3.5e-07 59.3 146 29.5
Ciclev10006866m.g Citrus clementina HOM05D000264 ORTHO05D000152 4.5e-07 58.9 143 31.5
Gorai.012G180100 Gossypium raimondii HOM05D000264 ORTHO05D000152 4.5e-07 58.9 172 27.9
Duzib212G1007 Durio zibethinus HOM05D000264 ORTHO05D000152 5.9e-07 58.5 145 29.0
Gohir.D04G184200 Gossypium hirsutum HOM05D000264 ORTHO05D000152 5.9e-07 58.5 161 28.0
Gorai.012G179600 Gossypium raimondii HOM05D000264 ORTHO05D000152 5.9e-07 58.5 161 28.0
Hma1.2p1_1193F.1_g265660 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 5.9e-07 58.5 161 29.2
CiPaw.12G052000 Carya illinoinensis HOM05D000264 ORTHO05D000152 7.7e-07 58.2 146 28.8
Ciclev10006527m.g Citrus clementina HOM05D000264 ORTHO05D000152 7.7e-07 58.2 151 26.5
Ciclev10016608m.g Citrus clementina HOM05D000264 ORTHO05D000152 7.7e-07 58.2 160 25.6
COL.COLO4_15780 Corchorus olitorius HOM05D000264 ORTHO05D000152 7.7e-07 58.2 154 26.0
Gohir.D04G184400 Gossypium hirsutum HOM05D000264 ORTHO05D000152 7.7e-07 58.2 162 29.0
Gorai.012G178000 Gossypium raimondii HOM05D000264 ORTHO05D000152 7.7e-07 58.2 162 29.0
CANSAT78G0315 Cannabis sativa HOM05D000264 ORTHO05D000152 1.0e-06 57.8 115 31.3
Gohir.D04G184900 Gossypium hirsutum HOM05D000264 ORTHO05D000152 1.0e-06 57.8 172 27.9
Gohir.D04G185250 Gossypium hirsutum HOM05D000264 ORTHO05D000152 1.0e-06 57.8 162 27.8
Gorai.012G179400 Gossypium raimondii HOM05D000264 ORTHO05D000152 1.0e-06 57.8 172 27.9
Oeu020735.1 Olea europaea HOM05D000264 ORTHO05D000152 1.0e-06 57.8 150 30.7
Peaxi162Scf00071g00095 Petunia axillaris HOM05D000264 ORTHO05D000152 1.0e-06 57.8 166 28.9
Gohir.D04G184750 Gossypium hirsutum HOM05D000264 ORTHO05D000152 1.3e-06 57.4 162 27.8
Gorai.012G177500 Gossypium raimondii HOM05D000264 ORTHO05D000152 1.3e-06 57.4 161 28.6
Gorai.012G179000 Gossypium raimondii HOM05D000264 ORTHO05D000152 1.3e-06 57.4 162 27.8
Potri.019G108200 Populus trichocarpa HOM05D000264 ORTHO05D000152 1.3e-06 57.4 158 27.2
Eucgr.D01261 Eucalyptus grandis HOM05D000264 ORTHO05D000152 1.7e-06 57.0 139 32.4
Gohir.D04G183800 Gossypium hirsutum HOM05D000264 ORTHO05D000152 1.7e-06 57.0 151 31.1
Gorai.012G177400 Gossypium raimondii HOM05D000264 ORTHO05D000152 1.7e-06 57.0 152 30.3
Atru.chr2.960 Acer truncatum HOM05D000264 ORTHO05D000152 2.3e-06 56.6 121 34.7
Cc11_g14510 Coffea canephora HOM05D000264 ORTHO05D000152 2.3e-06 56.6 173 28.9
ECA233G1129 Erigeron canadensis HOM05D000264 ORTHO05D000152 2.3e-06 56.6 139 28.1
Potri.019G107700 Populus trichocarpa HOM05D000264 ORTHO05D000152 2.3e-06 56.6 146 30.1
CiPaw.12G052300 Carya illinoinensis HOM05D000264 ORTHO05D000152 2.9e-06 56.2 85 38.8
Nitab4.5_0002409g0020 Nicotiana tabacum HOM05D000264 ORTHO05D000152 2.9e-06 56.2 147 30.6
Ciclev10007017m.g Citrus clementina HOM05D000264 ORTHO05D000152 3.8e-06 55.8 143 25.2
Hma1.2p1_1276F.1_g272230 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 3.8e-06 55.8 173 28.9
Lj6A647T16 Lonicera japonica HOM05D000264 ORTHO05D000152 3.8e-06 55.8 148 31.1
Ciclev10024428m.g Citrus clementina HOM05D000264 ORTHO05D000152 5.0e-06 55.5 146 30.8
Gorai.012G176800 Gossypium raimondii HOM05D000264 ORTHO05D000152 5.0e-06 55.5 165 30.9
Prupe.4G144900 Prunus persica HOM05D000264 ORTHO05D000152 5.0e-06 55.5 91 39.6
Eucgr.D01523 Eucalyptus grandis HOM05D000264 ORTHO05D000152 6.6e-06 55.1 166 31.3
Eucgr.D01531 Eucalyptus grandis HOM05D000264 ORTHO05D000152 6.6e-06 55.1 139 31.7
Gorai.012G177600 Gossypium raimondii HOM05D000264 ORTHO05D000152 6.6e-06 55.1 162 27.2
Ciclev10007078m.g Citrus clementina HOM05D000264 ORTHO05D000152 8.6e-06 54.7 162 26.5
Eucgr.D01232 Eucalyptus grandis HOM05D000264 ORTHO05D000152 8.6e-06 54.7 144 31.2
Gorai.012G180200 Gossypium raimondii HOM05D000264 ORTHO05D000152 8.6e-06 54.7 163 27.6
Nitab4.5_0000804g0220 Nicotiana tabacum HOM05D000264 ORTHO05D000152 8.6e-06 54.7 130 32.3
QL03p028301 Quercus lobata HOM05D000264 ORTHO05D000152 8.6e-06 54.7 167 30.5
TAR627G0592 Trochodendron aralioides HOM05D000264 ORTHO05D000152 8.6e-06 54.7 140 32.9


User provided reference genes

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