Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p015309 Quercus lobata HOM05D008582 ORTHO05D010200 5.7e-89 330.9 165 100.0
QL03p015351 Quercus lobata HOM05D008582 ORTHO05D010200 7.1e-47 191.0 162 66.0
QL03p015301 Quercus lobata HOM05D008582 ORTHO05D010200 6.2e-43 177.9 188 54.8
QL03p015386 Quercus lobata HOM05D008582 ORTHO05D010200 4.4e-41 171.8 168 59.5
QL03p015220 Quercus lobata HOM05D008582 ORTHO05D010200 3.4e-33 145.6 154 53.9
QL03p014248 Quercus lobata HOM05D008582 ORTHO05D010200 6.4e-24 114.8 157 40.8
QL03p015279 Quercus lobata HOM05D008582 ORTHO05D010200 2.7e-22 109.4 102 57.8
Cfa006725 Carpinus fangiana HOM05D008582 ORTHO05D010200 7.9e-22 107.8 159 40.3
CiPaw.07G030600 Carya illinoinensis HOM05D008582 ORTHO05D010200 1.0e-21 107.5 156 40.4
Ciclev10003144m.g Citrus clementina HOM05D008582 ORTHO05D010200 3.0e-21 105.9 152 37.5
QL03p015287 Quercus lobata HOM05D008582 ORTHO05D010200 5.1e-21 105.1 102 55.9
QL03p015391 Quercus lobata HOM05D008582 ORTHO05D010200 2.5e-20 102.8 121 46.3
Haze_04035 Corylus avellana HOM05D008582 ORTHO05D010200 9.6e-20 100.9 160 39.4
COL.COLO4_12929 Corchorus olitorius HOM05D008582 ORTHO05D010200 1.6e-19 100.1 158 36.1
QL03p015213 Quercus lobata HOM05D008582 ORTHO05D010200 6.9e-18 94.7 134 41.0
QL03p015030 Quercus lobata HOM05D008582 ORTHO05D010200 2.0e-17 93.2 158 36.7
QL03p015096 Quercus lobata HOM05D008582 ORTHO05D010200 2.0e-17 93.2 138 39.9
QL03p014613 Quercus lobata HOM05D008582 ORTHO05D010200 4.5e-17 92.0 162 36.4
CANSAT54G1821 Cannabis sativa HOM05D008582 ORTHO05D010200 5.5e-15 85.1 150 38.0
COL.COLO4_12937 Corchorus olitorius HOM05D008582 ORTHO05D010200 2.3e-13 79.7 146 30.8
Atru.chr2.336 Acer truncatum HOM05D011415 ORTHO05D010200 3.9e-13 79.0 151 34.4
FvH4_5g11671 Fragaria vesca HOM05D008582 ORTHO05D010200 1.1e-12 77.4 162 40.1
FvH4_6g07631 Fragaria vesca HOM05D008582 ORTHO05D010200 1.3e-11 73.9 166 34.3
FAN02G2559 Fragaria x ananassa HOM05D008582 ORTHO05D010200 2.1e-11 73.2 158 35.4
FAN14G5961 Fragaria x ananassa HOM05D008582 ORTHO05D010200 2.1e-11 73.2 165 32.7
FvH4_6g07632 Fragaria vesca HOM05D009201 ORTHO05D005238 2.8e-11 72.8 156 34.6
FAN14G3048 Fragaria x ananassa HOM05D008582 ORTHO05D010200 2.8e-11 72.8 154 35.7
Actinidia01501 Actinidia chinensis HOM05D008582 ORTHO05D010200 3.7e-11 72.4 151 33.1
PSO541G1163 Papaver somniferum HOM05D000886 ORTHO05D000525 6.2e-11 71.6 158 29.7
Sopen10g028450 Solanum pennellii HOM05D011415 ORTHO05D010200 1.4e-10 70.5 154 32.5
FvH4_6g07633 Fragaria vesca HOM05D008582 ORTHO05D010200 6.9e-10 68.2 174 31.6
Rhsim05G0128000 Rhododendron simsii HOM05D008582 ORTHO05D010200 6.9e-10 68.2 142 31.7
PSO675G6200 Papaver somniferum HOM05D000886 ORTHO05D000525 1.5e-09 67.0 158 29.7
Nn3g21760 Nelumbo nucifera HOM05D000886 ORTHO05D000525 2.0e-09 66.6 121 34.7
FAN14G0417 Fragaria x ananassa HOM05D008582 ORTHO05D010200 3.4e-09 65.9 174 31.6
FAN05G2556 Fragaria x ananassa HOM05D008582 ORTHO05D010200 4.5e-09 65.5 161 31.1
Lj5P326T20 Lonicera japonica HOM05D008582 ORTHO05D010200 4.5e-09 65.5 138 34.1
Lj5C326G5 Lonicera japonica HOM05D008582 ORTHO05D010200 5.8e-09 65.1 164 32.3
Lj5C326T9 Lonicera japonica HOM05D008582 ORTHO05D010200 5.8e-09 65.1 105 40.0
COL.COLO4_12936 Corchorus olitorius HOM05D008582 ORTHO05D010200 1.3e-08 63.9 117 30.8
Nitab4.5_0004317g0040 Nicotiana tabacum HOM05D011415 ORTHO05D010200 1.3e-08 63.9 110 36.4
Ca_10270_v3 Cicer arietinum L. HOM05D000886 ORTHO05D000525 1.7e-08 63.5 149 26.2
Lj5P327T15 Lonicera japonica HOM05D008582 ORTHO05D010200 1.7e-08 63.5 156 33.3
Peaxi162Scf00011g01434 Petunia axillaris HOM05D000886 ORTHO05D000525 2.9e-08 62.8 119 32.8
Dinv17366 Davidia involucrata HOM05D009288 ORTHO05D011444 4.9e-08 62.0 145 33.1
Lj5C326G8 Lonicera japonica HOM05D008582 ORTHO05D010200 4.9e-08 62.0 151 32.5
PGSC0003DMG400019127 Solanum tuberosum HOM05D011415 ORTHO05D010200 8.4e-08 61.2 163 32.5
Solyc10g076810.1 Solanum lycopersicum HOM05D011415 ORTHO05D010200 1.4e-07 60.5 174 30.5
CBR_g26360 Chara braunii HOM05D000886 ORTHO05D000525 3.2e-07 59.3 151 29.8
CSS0029635 Camellia sinensis var. sinensis HOM05D000886 ORTHO05D000525 4.2e-07 58.9 124 34.7
Peaxi162Scf00429g00052 Petunia axillaris HOM05D011415 ORTHO05D010200 7.1e-07 58.2 151 33.8
ATR0693G315 Amborella trichopoda HOM05D000886 ORTHO05D000525 9.3e-07 57.8 149 24.8
CiPaw.08G087400 Carya illinoinensis HOM05D000886 ORTHO05D000525 9.3e-07 57.8 120 33.3
EL10Ac3g07294 Beta vulgaris HOM05D000886 ORTHO05D000525 1.2e-06 57.4 117 31.6
AUR62006733 Chenopodium quinoa HOM05D019907 ORTHO05D010200 1.2e-06 57.4 165 29.7
Lj5g0012682 Lotus japonicus HOM05D000886 ORTHO05D000525 1.6e-06 57.0 161 29.8
Nitab4.5_0011877g0020 Nicotiana tabacum HOM05D000886 ORTHO05D000525 1.6e-06 57.0 119 30.3
PGSC0003DMG400019128 Solanum tuberosum HOM05D011415 ORTHO05D010200 1.6e-06 57.0 180 30.0
CANSAT56G3317 Cannabis sativa HOM05D000886 ORTHO05D000525 2.1e-06 56.6 146 30.1
AUR62000380 Chenopodium quinoa HOM05D019907 ORTHO05D010200 2.7e-06 56.2 165 29.7
COL.COLO4_23199 Corchorus olitorius HOM05D000886 ORTHO05D000525 2.7e-06 56.2 108 30.6
Dinv04815 Davidia involucrata HOM05D000886 ORTHO05D000525 3.5e-06 55.8 147 28.6
AT2G36110 Arabidopsis thaliana HOM05D000886 ORTHO05D000525 4.6e-06 55.5 73 42.5
Cfa005760 Carpinus fangiana HOM05D000886 ORTHO05D000525 4.6e-06 55.5 121 30.6
Cfa016272 Carpinus fangiana HOM05D000886 ORTHO05D000525 6.0e-06 55.1 108 27.8


User provided reference genes

Program Settings