Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p015279 Quercus lobata HOM05D008582 ORTHO05D010200 7.3e-80 300.4 146 100.0
QL03p015287 Quercus lobata HOM05D008582 ORTHO05D010200 1.3e-55 219.9 141 78.7
QL03p015301 Quercus lobata HOM05D008582 ORTHO05D010200 3.5e-50 201.8 146 73.3
QL03p015351 Quercus lobata HOM05D008582 ORTHO05D010200 1.1e-48 196.8 146 70.5
QL03p015386 Quercus lobata HOM05D008582 ORTHO05D010200 1.1e-38 163.7 146 61.0
QL03p015220 Quercus lobata HOM05D008582 ORTHO05D010200 1.2e-29 133.7 130 53.8
QL03p015213 Quercus lobata HOM05D008582 ORTHO05D010200 6.7e-25 117.9 146 43.8
QL03p015096 Quercus lobata HOM05D008582 ORTHO05D010200 4.4e-24 115.2 146 42.5
QL03p015309 Quercus lobata HOM05D008582 ORTHO05D010200 7.0e-22 107.8 102 57.8
QL03p015391 Quercus lobata HOM05D008582 ORTHO05D010200 1.5e-21 106.7 123 47.2
QL03p014248 Quercus lobata HOM05D008582 ORTHO05D010200 1.4e-19 100.1 147 38.8
QL03p014337 Quercus lobata HOM05D008582 ORTHO05D010200 9.4e-19 97.4 66 66.7
QL03p015030 Quercus lobata HOM05D008582 ORTHO05D010200 2.1e-18 96.3 135 39.3
CiPaw.07G030600 Carya illinoinensis HOM05D008582 ORTHO05D010200 1.8e-17 93.2 150 39.3
Ciclev10003144m.g Citrus clementina HOM05D008582 ORTHO05D010200 3.3e-16 89.0 149 35.6
QL03p014613 Quercus lobata HOM05D008582 ORTHO05D010200 7.4e-16 87.8 76 56.6
FAN14G0417 Fragaria x ananassa HOM05D008582 ORTHO05D010200 3.7e-15 85.5 146 37.0
FvH4_6g07633 Fragaria vesca HOM05D008582 ORTHO05D010200 6.3e-15 84.7 146 37.0
Cfa006725 Carpinus fangiana HOM05D008582 ORTHO05D010200 8.2e-15 84.3 150 34.0
Haze_04035 Corylus avellana HOM05D008582 ORTHO05D010200 5.3e-14 81.6 143 35.7
FAN14G3048 Fragaria x ananassa HOM05D008582 ORTHO05D010200 9.1e-14 80.9 70 51.4
FAN05G2556 Fragaria x ananassa HOM05D008582 ORTHO05D010200 1.6e-13 80.1 139 34.5
COL.COLO4_12937 Corchorus olitorius HOM05D008582 ORTHO05D010200 3.2e-11 72.4 148 35.1
Dinv24474 Davidia involucrata HOM05D008582 ORTHO05D010200 5.5e-11 71.6 76 43.4
FAN14G5961 Fragaria x ananassa HOM05D008582 ORTHO05D010200 7.2e-11 71.2 78 48.7
Actinidia01501 Actinidia chinensis HOM05D008582 ORTHO05D010200 9.4e-11 70.9 144 34.7
FvH4_6g07631 Fragaria vesca HOM05D008582 ORTHO05D010200 9.4e-11 70.9 78 48.7
COL.COLO4_12929 Corchorus olitorius HOM05D008582 ORTHO05D010200 4.7e-10 68.6 150 31.3
Dinv30902 Davidia involucrata HOM05D008582 ORTHO05D010200 1.0e-09 67.4 73 47.9
Atru.chr2.336 Acer truncatum HOM05D011415 ORTHO05D010200 4.0e-09 65.5 142 33.1
PGSC0003DMG400019127 Solanum tuberosum HOM05D011415 ORTHO05D010200 5.2e-09 65.1 147 31.3
Lj5C326T9 Lonicera japonica HOM05D008582 ORTHO05D010200 6.7e-09 64.7 152 33.6
Solyc10g076810.1 Solanum lycopersicum HOM05D011415 ORTHO05D010200 1.5e-08 63.5 147 32.7
FvH4_6g07632 Fragaria vesca HOM05D009201 ORTHO05D005238 4.4e-08 62.0 74 39.2
Lj5C326G8 Lonicera japonica HOM05D008582 ORTHO05D010200 4.4e-08 62.0 151 31.8
Lj5C326G5 Lonicera japonica HOM05D008582 ORTHO05D010200 7.5e-08 61.2 152 32.2
Rhsim05G0127800 Rhododendron simsii HOM05D008582 ORTHO05D010200 9.7e-08 60.8 123 34.1
Rhsim05G0128000 Rhododendron simsii HOM05D008582 ORTHO05D010200 1.3e-07 60.5 149 32.9
PGSC0003DMG400019128 Solanum tuberosum HOM05D011415 ORTHO05D010200 1.3e-07 60.5 147 29.9
Nn8g39916 Nelumbo nucifera HOM05D000886 ORTHO05D000525 3.7e-07 58.9 70 47.1
Sopen10g028450 Solanum pennellii HOM05D011415 ORTHO05D010200 1.1e-06 57.4 74 40.5
Solyc01g088540.1 Solanum lycopersicum HOM05D011415 ORTHO05D010200 9.1e-06 54.3 151 27.8
Sopen01g035400 Solanum pennellii HOM05D011415 ORTHO05D010200 9.1e-06 54.3 151 27.8


User provided reference genes

Program Settings