Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p015213 Quercus lobata HOM05D008582 ORTHO05D010200 2.6e-109 398.7 196 100.0
QL03p015096 Quercus lobata HOM05D008582 ORTHO05D010200 2.7e-93 345.5 176 95.5
QL03p015351 Quercus lobata HOM05D008582 ORTHO05D010200 1.9e-43 179.9 188 50.0
QL03p015301 Quercus lobata HOM05D008582 ORTHO05D010200 2.9e-39 166.0 207 45.9
QL03p015386 Quercus lobata HOM05D008582 ORTHO05D010200 7.4e-35 151.4 183 45.9
QL03p015220 Quercus lobata HOM05D008582 ORTHO05D010200 2.4e-33 146.4 176 46.6
QL03p014248 Quercus lobata HOM05D008582 ORTHO05D010200 4.6e-29 132.1 169 43.8
Ciclev10003144m.g Citrus clementina HOM05D008582 ORTHO05D010200 3.9e-28 129.0 154 48.1
CiPaw.07G030600 Carya illinoinensis HOM05D008582 ORTHO05D010200 7.4e-27 124.8 170 43.5
QL03p015030 Quercus lobata HOM05D008582 ORTHO05D010200 1.1e-25 120.9 173 40.5
Cfa006725 Carpinus fangiana HOM05D008582 ORTHO05D010200 1.2e-24 117.5 171 39.8
QL03p015279 Quercus lobata HOM05D008582 ORTHO05D010200 1.2e-24 117.5 146 43.8
QL03p015391 Quercus lobata HOM05D008582 ORTHO05D010200 8.4e-23 111.3 142 45.8
QL03p014613 Quercus lobata HOM05D008582 ORTHO05D010200 5.5e-22 108.6 168 41.1
Haze_04035 Corylus avellana HOM05D008582 ORTHO05D010200 4.6e-21 105.5 157 38.9
COL.COLO4_12937 Corchorus olitorius HOM05D008582 ORTHO05D010200 6.0e-21 105.1 178 38.2
Atru.chr2.336 Acer truncatum HOM05D011415 ORTHO05D010200 6.7e-20 101.7 171 39.2
FvH4_6g07633 Fragaria vesca HOM05D008582 ORTHO05D010200 1.6e-18 97.1 188 35.1
FAN14G3048 Fragaria x ananassa HOM05D008582 ORTHO05D010200 2.2e-18 96.7 154 37.7
COL.COLO4_12929 Corchorus olitorius HOM05D008582 ORTHO05D010200 6.3e-18 95.1 175 37.7
FAN05G2556 Fragaria x ananassa HOM05D008582 ORTHO05D010200 6.3e-18 95.1 190 34.2
FAN14G0417 Fragaria x ananassa HOM05D008582 ORTHO05D010200 1.1e-17 94.4 188 34.6
QL03p015309 Quercus lobata HOM05D008582 ORTHO05D010200 2.4e-17 93.2 134 41.0
QL03p014337 Quercus lobata HOM05D008582 ORTHO05D010200 5.3e-17 92.0 67 64.2
QL03p015287 Quercus lobata HOM05D008582 ORTHO05D010200 9.0e-17 91.3 129 38.8
Nn8g39916 Nelumbo nucifera HOM05D000886 ORTHO05D000525 2.2e-15 86.7 176 36.9
Actinidia01501 Actinidia chinensis HOM05D008582 ORTHO05D010200 3.2e-14 82.8 139 37.4
FvH4_5g11671 Fragaria vesca HOM05D008582 ORTHO05D010200 7.2e-14 81.6 152 37.5
FvH4_6g07631 Fragaria vesca HOM05D008582 ORTHO05D010200 3.6e-13 79.3 185 36.2
FAN14G5961 Fragaria x ananassa HOM05D008582 ORTHO05D010200 6.1e-13 78.6 185 35.7
Os01g0660800 Oryza sativa ssp. japonica HOM05D000886 ORTHO05D000525 6.1e-13 78.6 154 32.5
CANSAT54G1821 Cannabis sativa HOM05D008582 ORTHO05D010200 1.4e-12 77.4 172 34.3
Sopen10g028450 Solanum pennellii HOM05D011415 ORTHO05D010200 1.4e-12 77.4 181 29.8
Peaxi162Scf00170g00088 Petunia axillaris HOM05D011415 ORTHO05D010200 1.8e-12 77.0 166 34.9
PGSC0003DMG400019127 Solanum tuberosum HOM05D011415 ORTHO05D010200 2.3e-12 76.6 186 30.6
FvH4_6g07632 Fragaria vesca HOM05D009201 ORTHO05D005238 6.7e-12 75.1 136 36.0
COL.COLO4_12936 Corchorus olitorius HOM05D008582 ORTHO05D010200 8.8e-12 74.7 135 35.6
Dinv24474 Davidia involucrata HOM05D008582 ORTHO05D010200 8.8e-12 74.7 92 42.4
Lj5C326T9 Lonicera japonica HOM05D008582 ORTHO05D010200 1.5e-11 73.9 138 38.4
Solyc10g076810.1 Solanum lycopersicum HOM05D011415 ORTHO05D010200 5.7e-11 72.0 189 27.5
Lj5C326G5 Lonicera japonica HOM05D008582 ORTHO05D010200 9.7e-11 71.2 138 37.7
Lj5P282T58 Lonicera japonica HOM05D000886 ORTHO05D000525 9.7e-11 71.2 158 31.6
ECA234G2044 Erigeron canadensis HOM05D000886 ORTHO05D000525 1.3e-10 70.9 156 34.0
Lj5C326G8 Lonicera japonica HOM05D008582 ORTHO05D010200 1.3e-10 70.9 171 33.3
PGSC0003DMG400019128 Solanum tuberosum HOM05D011415 ORTHO05D010200 1.3e-10 70.9 184 28.8
SalBow3G0713 Salvia bowleyana HOM05D000886 ORTHO05D000525 1.7e-10 70.5 151 32.5
AUR62006733 Chenopodium quinoa HOM05D019907 ORTHO05D010200 2.2e-10 70.1 160 34.4
Sc25g0005550 Simmondsia chinensis HOM05D000886 ORTHO05D000525 2.8e-10 69.7 156 34.0
FAN25G0223 Fragaria x ananassa HOM05D000886 ORTHO05D000525 3.7e-10 69.3 154 31.2
Oeu038044.1 Olea europaea HOM05D000886 ORTHO05D000525 3.7e-10 69.3 154 33.8
Migut.A01095 Erythranthe guttata HOM05D000886 ORTHO05D000525 6.3e-10 68.6 152 33.6
Actinidia35513 Actinidia chinensis HOM05D000886 ORTHO05D000525 8.2e-10 68.2 152 34.9
Haze_00024 Corylus avellana HOM05D000886 ORTHO05D000525 8.2e-10 68.2 174 30.5
Dinv30902 Davidia involucrata HOM05D008582 ORTHO05D010200 8.2e-10 68.2 75 48.0
Rhsim05G0128000 Rhododendron simsii HOM05D008582 ORTHO05D010200 8.2e-10 68.2 157 34.4
AUR62000380 Chenopodium quinoa HOM05D019907 ORTHO05D010200 1.1e-09 67.8 160 34.4
FAN11G3456 Fragaria x ananassa HOM05D000886 ORTHO05D000525 1.4e-09 67.4 154 31.2
Solyc01g100680.1 Solanum lycopersicum HOM05D000886 ORTHO05D000525 1.4e-09 67.4 154 36.4
CAN.G220.21 Capsicum annuum HOM05D000886 ORTHO05D000525 1.8e-09 67.0 172 28.5
FvH4_3g40510 Fragaria vesca HOM05D000886 ORTHO05D000525 1.8e-09 67.0 154 31.2
Nitab4.5_0001338g0050 Nicotiana tabacum HOM05D000886 ORTHO05D000525 1.8e-09 67.0 151 33.1
CBR_g26360 Chara braunii HOM05D000886 ORTHO05D000525 2.4e-09 66.6 185 28.6
Nitab4.5_0004525g0050 Nicotiana tabacum HOM05D000886 ORTHO05D000525 2.4e-09 66.6 151 33.1
FAN16G2738 Fragaria x ananassa HOM05D000886 ORTHO05D000525 4.1e-09 65.9 154 31.2
Oeu038042.1 Olea europaea HOM05D000886 ORTHO05D000525 4.1e-09 65.9 154 33.1
Zm00001eb359560 Zea mays HOM05D000886 ORTHO05D000525 4.1e-09 65.9 155 30.3
Ciclev10006543m.g Citrus clementina HOM05D000886 ORTHO05D000525 6.9e-09 65.1 147 31.3
PGSC0003DMG400012475 Solanum tuberosum HOM05D000886 ORTHO05D000525 6.9e-09 65.1 166 28.3
Cfa016274 Carpinus fangiana HOM05D000886 ORTHO05D000525 1.2e-08 64.3 151 30.5
Sopen01g044180 Solanum pennellii HOM05D000886 ORTHO05D000525 1.2e-08 64.3 151 31.8
Nitab4.5_0001338g0080 Nicotiana tabacum HOM05D000886 ORTHO05D000525 1.5e-08 63.9 151 31.8
PGSC0003DMG400014043 Solanum tuberosum HOM05D000886 ORTHO05D000525 1.5e-08 63.9 159 30.2
VMungo0647G2538 Vigna mungo HOM05D000886 ORTHO05D000525 2.0e-08 63.5 153 30.1
CiPaw.01G083200 Carya illinoinensis HOM05D000886 ORTHO05D000525 2.6e-08 63.2 154 32.5
Hma1.2p1_0608F.1_g188330 Hydrangea macrophylla HOM05D009288 ORTHO05D011444 3.4e-08 62.8 152 31.6
MBI18_g35538_MAGBIO Magnolia biondii HOM05D000886 ORTHO05D000525 3.4e-08 62.8 144 29.9
Rhsim05G0127800 Rhododendron simsii HOM05D008582 ORTHO05D010200 3.4e-08 62.8 103 35.0
Glyma.18G194300 Glycine max HOM05D000886 ORTHO05D000525 4.5e-08 62.4 158 32.3
SGA_v2.0_scaffold240G44131 Striga asiatica HOM05D000886 ORTHO05D000525 4.5e-08 62.4 173 29.5
CAN.G220.20 Capsicum annuum HOM05D000886 ORTHO05D000525 7.7e-08 61.6 169 27.2
Cfa016273 Carpinus fangiana HOM05D000886 ORTHO05D000525 7.7e-08 61.6 159 30.8
FAN02G2559 Fragaria x ananassa HOM05D008582 ORTHO05D010200 7.7e-08 61.6 140 32.9
AUR62024614 Chenopodium quinoa HOM05D000886 ORTHO05D000525 1.0e-07 61.2 143 32.9
DCAR_030457 Daucus carota HOM05D000886 ORTHO05D000525 1.3e-07 60.8 185 27.6
PSO541G3748 Papaver somniferum HOM05D000886 ORTHO05D000525 1.7e-07 60.5 158 27.2
TPR.G1581 Trifolium pratense HOM05D000886 ORTHO05D000525 2.9e-07 59.7 150 28.7
SMO230G0079 Selaginella moellendorffii HOM05D000886 ORTHO05D000525 3.8e-07 59.3 173 28.9
EL10Ac3g07294 Beta vulgaris HOM05D000886 ORTHO05D000525 5.0e-07 58.9 167 31.1
PGSC0003DMG400012504 Solanum tuberosum HOM05D000886 ORTHO05D000525 5.0e-07 58.9 165 27.9
Os04g0225100 Oryza sativa ssp. japonica HOM05D000886 ORTHO05D000525 6.5e-07 58.5 149 29.5
Prupe.4G179100 Prunus persica HOM05D000886 ORTHO05D000525 6.5e-07 58.5 174 28.7
CiPaw.08G087400 Carya illinoinensis HOM05D000886 ORTHO05D000525 8.5e-07 58.2 154 29.9
Hma1.2p1_0662F.1_g198230 Hydrangea macrophylla HOM05D000886 ORTHO05D000525 8.5e-07 58.2 152 28.3
Ah.06g196130 Amaranthus hybridus HOM05D019907 ORTHO05D010200 1.1e-06 57.8 153 32.7
CSS0042968 Camellia sinensis var. sinensis HOM05D000886 ORTHO05D000525 1.1e-06 57.8 74 44.6
Glyma.18G194400 Glycine max HOM05D000886 ORTHO05D000525 1.1e-06 57.8 154 29.9
Glyma.07G143200 Glycine max HOM05D000886 ORTHO05D000525 1.4e-06 57.4 149 30.2
Pp3c2_23990 Physcomitrium patens HOM05D000886 ORTHO05D000525 1.4e-06 57.4 150 30.7
Psat3g135480 Pisum sativum HOM05D000886 ORTHO05D000525 1.4e-06 57.4 179 27.4
AUR62011771 Chenopodium quinoa HOM05D018970 ORTHO05D019524 1.9e-06 57.0 197 27.9
Migut.O00534 Erythranthe guttata HOM05D000886 ORTHO05D000525 1.9e-06 57.0 161 28.0
TPR.G39393 Trifolium pratense HOM05D000886 ORTHO05D000525 1.9e-06 57.0 189 24.9
RcHm_v2.0_Chr5g0073181 Rosa chinensis HOM05D000886 ORTHO05D000525 2.5e-06 56.6 155 30.3
Cfa005760 Carpinus fangiana HOM05D000886 ORTHO05D000525 3.2e-06 56.2 151 27.8
Nitab4.5_0004317g0040 Nicotiana tabacum HOM05D011415 ORTHO05D010200 3.2e-06 56.2 173 29.5
Potri.011G116000 Populus trichocarpa HOM05D000886 ORTHO05D000525 4.2e-06 55.8 158 25.9
VMungo0647G0937 Vigna mungo HOM05D000886 ORTHO05D000525 4.2e-06 55.8 150 26.7
MD14G1051900 Malus domestica HOM05D000886 ORTHO05D000525 5.5e-06 55.5 152 31.6
AT2G36110 Arabidopsis thaliana HOM05D000886 ORTHO05D000525 7.2e-06 55.1 165 29.1
Prupe.7G019000 Prunus persica HOM05D000886 ORTHO05D000525 7.2e-06 55.1 147 28.6
Rhsim13G0181100 Rhododendron simsii HOM05D009288 ORTHO05D011444 7.2e-06 55.1 153 29.4
Actinidia16578 Actinidia chinensis HOM05D001211 ORTHO05D001084 9.4e-06 54.7 159 28.3


User provided reference genes

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