Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p014026 Quercus lobata HOM05D000162 ORTHO05D000090 3.7e-19 100.5 50 100.0
QL03p015011 Quercus lobata HOM05D000162 ORTHO05D000090 2.0e-12 78.2 41 90.2
QL03p018073 Quercus lobata HOM05D000162 ORTHO05D000090 7.6e-12 76.3 42 88.1
QL04p064912 Quercus lobata HOM05D000162 ORTHO05D000090 3.7e-11 73.9 42 81.0
QL04p042230 Quercus lobata HOM05D000162 ORTHO05D000090 1.1e-10 72.4 41 80.5
QL05p059431 Quercus lobata HOM05D000162 ORTHO05D000090 1.1e-10 72.4 42 78.6
QL03p013269 Quercus lobata HOM05D000162 ORTHO05D000090 1.4e-10 72.0 50 68.0
QL04p040267 Quercus lobata HOM05D000162 ORTHO05D000090 1.9e-10 71.6 42 81.0
QL03p013882 Quercus lobata HOM05D000162 ORTHO05D000090 5.4e-10 70.1 42 73.8
QL03p013273 Quercus lobata HOM05D000162 ORTHO05D000090 1.6e-09 68.6 39 82.1
QL03p014045 Quercus lobata HOM05D000162 ORTHO05D000090 1.6e-09 68.6 39 84.6
QL09p001249 Quercus lobata HOM05D000162 ORTHO05D000090 1.6e-09 68.6 38 84.2
QL03p014360 Quercus lobata HOM05D000315 ORTHO05D000090 2.1e-09 68.2 42 78.6
QL03p013174 Quercus lobata HOM05D000162 ORTHO05D000090 2.7e-09 67.8 39 76.9
QL03p014414 Quercus lobata HOM05D000162 ORTHO05D000090 3.5e-09 67.4 39 84.6
QL04p064892 Quercus lobata HOM05D000162 ORTHO05D000090 4.6e-09 67.0 42 73.8
Haze_13083 Corylus avellana HOM05D004838 ORTHO05D005373 1.3e-08 65.5 42 71.4
QL03p013240 Quercus lobata HOM05D000162 ORTHO05D000090 1.3e-08 65.5 41 78.0
QL04p042189 Quercus lobata HOM05D000162 ORTHO05D000090 1.3e-08 65.5 38 76.3
QL03p015188 Quercus lobata HOM05D000162 ORTHO05D000090 1.7e-08 65.1 38 76.3
QL93p0133_0031 Quercus lobata HOM05D000162 ORTHO05D000090 1.7e-08 65.1 39 74.4
QL03p009030 Quercus lobata HOM05D000162 ORTHO05D000090 2.3e-08 64.7 50 60.0
Haze_27337 Corylus avellana HOM05D019995 ORTHO05D012019 6.6e-08 63.2 41 65.9
QL03p013157 Quercus lobata HOM05D000162 ORTHO05D000090 6.6e-08 63.2 46 65.2
QL03p017801 Quercus lobata HOM05D000162 ORTHO05D000090 8.6e-08 62.8 39 76.9
QL03p013141 Quercus lobata HOM05D000162 ORTHO05D000090 1.5e-07 62.0 37 75.7
CiPaw.08G121000 Carya illinoinensis HOM05D000162 ORTHO05D000090 2.5e-07 61.2 42 64.3
CiPaw.08G121200 Carya illinoinensis HOM05D000162 ORTHO05D000090 2.5e-07 61.2 42 64.3
Haze_21400 Corylus avellana HOM05D000162 ORTHO05D000090 2.5e-07 61.2 41 68.3
QL03p009249 Quercus lobata HOM05D000162 ORTHO05D000090 2.5e-07 61.2 38 76.3
Haze_21380 Corylus avellana HOM05D000040 ORTHO05D000090 3.3e-07 60.8 41 68.3
QL03p014280 Quercus lobata HOM05D000162 ORTHO05D000090 4.3e-07 60.5 38 71.1
QL03p018645 Quercus lobata HOM05D000162 ORTHO05D000090 4.3e-07 60.5 48 58.3
QL08p020255 Quercus lobata HOM05D000162 ORTHO05D016273 4.3e-07 60.5 39 69.2
SalBow1G5498 Salvia bowleyana HOM05D000162 ORTHO05D000090 4.3e-07 60.5 42 57.1
Haze_21372 Corylus avellana HOM05D000162 ORTHO05D000090 5.6e-07 60.1 42 64.3
Haze_21374 Corylus avellana HOM05D000162 ORTHO05D000090 5.6e-07 60.1 42 64.3
QL03p014424 Quercus lobata HOM05D000162 ORTHO05D000090 5.6e-07 60.1 32 93.8
SalBow1G0248 Salvia bowleyana HOM05D000162 ORTHO05D000090 5.6e-07 60.1 42 57.1
Haze_21366 Corylus avellana HOM05D000290 ORTHO05D008298 7.3e-07 59.7 42 64.3
Haze_21398 Corylus avellana HOM05D000162 ORTHO05D000090 7.3e-07 59.7 42 64.3
Dinv06480 Davidia involucrata HOM05D000162 ORTHO05D000090 7.3e-07 59.7 37 70.3
QL03p013262 Quercus lobata HOM05D000162 ORTHO05D000090 7.3e-07 59.7 38 73.7
Thecc.05G196000 Theobroma cacao HOM05D000162 ORTHO05D000090 7.3e-07 59.7 42 64.3
CiPaw.08G119900 Carya illinoinensis HOM05D000162 ORTHO05D000090 9.6e-07 59.3 42 64.3
QL03p014838 Quercus lobata HOM05D000162 ORTHO05D000090 9.6e-07 59.3 30 100.0
THA.LOC109116384 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 9.6e-07 59.3 42 64.3
AUR62006932 Chenopodium quinoa HOM05D000162 ORTHO05D000090 1.2e-06 58.9 41 63.4
Ca_25323_v3 Cicer arietinum L. HOM05D000162 ORTHO05D000090 1.2e-06 58.9 42 61.9
Ca_25325_v3 Cicer arietinum L. HOM05D000162 ORTHO05D000090 1.2e-06 58.9 41 63.4
Thhalv10007258m.g Eutrema salsugineum HOM05D000162 ORTHO05D000090 1.2e-06 58.9 42 59.5
Medtr0019s0210 Medicago truncatula HOM05D000162 ORTHO05D000090 1.2e-06 58.9 41 58.5
CiPaw.08G120300 Carya illinoinensis HOM05D000162 ORTHO05D000090 1.6e-06 58.5 42 59.5
Manes.13G003702 Manihot esculenta HOM05D000162 ORTHO05D000090 1.6e-06 58.5 41 65.9
QL02p063313 Quercus lobata HOM05D027572 ORTHO05D034240 1.6e-06 58.5 39 74.4
QL03p009219 Quercus lobata HOM05D000162 ORTHO05D000090 1.6e-06 58.5 41 68.3
TWI63G1243 Tripterygium wilfordii HOM05D000162 ORTHO05D000090 1.6e-06 58.5 38 68.4
EL10Ac4g09779 Beta vulgaris HOM05D004640 ORTHO05D005489 2.8e-06 57.8 38 65.8
Potri.004G074700 Populus trichocarpa HOM05D000162 ORTHO05D000090 2.8e-06 57.8 39 64.1
QL03p009051 Quercus lobata HOM05D000162 ORTHO05D000090 2.8e-06 57.8 42 64.3
QL03p012973 Quercus lobata HOM05D000162 ORTHO05D000090 2.8e-06 57.8 34 73.5
QL03p013111 Quercus lobata HOM05D000162 ORTHO05D000090 2.8e-06 57.8 41 68.3
Carub.0001s1231 Capsella rubella HOM05D000162 ORTHO05D000090 3.6e-06 57.4 42 59.5
AUR62000621 Chenopodium quinoa HOM05D000162 ORTHO05D000090 3.6e-06 57.4 41 61.0
AUR62006934 Chenopodium quinoa HOM05D000162 ORTHO05D000090 3.6e-06 57.4 41 58.5
AUR62006936 Chenopodium quinoa HOM05D000162 ORTHO05D000090 3.6e-06 57.4 41 58.5
Hma1.2p1_0310F.1_g120960 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 3.6e-06 57.4 41 58.5
Potri.016G025600 Populus trichocarpa HOM05D000162 ORTHO05D000090 3.6e-06 57.4 42 57.1
EL10Ac4g09524 Beta vulgaris HOM05D000162 ORTHO05D000090 4.7e-06 57.0 41 61.0
CiPaw.08G120800 Carya illinoinensis HOM05D000162 ORTHO05D000090 4.7e-06 57.0 42 59.5
AUR62006930 Chenopodium quinoa HOM05D000162 ORTHO05D000090 4.7e-06 57.0 41 56.1
Haze_21383 Corylus avellana HOM05D000162 ORTHO05D000090 4.7e-06 57.0 41 61.0
Manes.09G015600 Manihot esculenta HOM05D000162 ORTHO05D000090 6.2e-06 56.6 42 57.1
Manes.13G006400 Manihot esculenta HOM05D000162 ORTHO05D000090 6.2e-06 56.6 40 60.0
Potri.019G062266 Populus trichocarpa HOM05D000162 ORTHO05D000090 6.2e-06 56.6 39 61.5
TWI36G0958 Tripterygium wilfordii HOM05D000162 ORTHO05D000090 6.2e-06 56.6 40 62.5
TWI63G0138 Tripterygium wilfordii HOM05D000162 ORTHO05D000090 6.2e-06 56.6 40 65.0
EL10Ac4g09425 Beta vulgaris HOM05D000162 ORTHO05D000090 8.1e-06 56.2 41 63.4
Haze_13084 Corylus avellana HOM05D000162 ORTHO05D000090 8.1e-06 56.2 39 66.7
Haze_21396 Corylus avellana HOM05D000162 ORTHO05D000090 8.1e-06 56.2 40 67.5
Glyma.16G160700 Glycine max HOM05D000162 ORTHO05D000090 8.1e-06 56.2 42 59.5
Gohir.A10G135300 Gossypium hirsutum HOM05D000162 ORTHO05D000090 8.1e-06 56.2 42 57.1
Gohir.D10G131400 Gossypium hirsutum HOM05D000162 ORTHO05D000090 8.1e-06 56.2 42 57.1
Gorai.011G145000 Gossypium raimondii HOM05D000162 ORTHO05D000090 8.1e-06 56.2 42 57.1
Nn1g02624 Nelumbo nucifera HOM05D000162 ORTHO05D000090 8.1e-06 56.2 36 63.9
Nn1g02625 Nelumbo nucifera HOM05D000162 ORTHO05D000090 8.1e-06 56.2 41 58.5
QL03p013836 Quercus lobata HOM05D000162 ORTHO05D000090 8.1e-06 56.2 28 100.0


User provided reference genes

Program Settings