Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p013388 Quercus lobata HOM05D000852 ORTHO05D000657 5.3e-80 301.2 149 100.0
QL03p016011 Quercus lobata HOM05D000852 ORTHO05D000657 8.3e-33 144.4 98 77.6
QL03p013281 Quercus lobata HOM05D000852 ORTHO05D000657 3.1e-32 142.5 73 93.2
QL03p040095 Quercus lobata HOM05D000852 ORTHO05D000657 4.7e-28 128.6 69 91.3
QL03p015844 Quercus lobata HOM05D000852 ORTHO05D000657 3.0e-14 82.8 94 51.1
QL03p015812 Quercus lobata HOM05D000852 ORTHO05D000657 8.6e-14 81.3 74 64.9
CiPaw.03G239000 Carya illinoinensis HOM05D000852 ORTHO05D000657 9.5e-13 77.8 73 60.3
QL03p016050 Quercus lobata HOM05D000852 ORTHO05D000657 9.5e-13 77.8 95 50.5
QL02p087120 Quercus lobata HOM05D000852 ORTHO05D000657 1.8e-11 73.6 72 58.3
Dinv41547 Davidia involucrata HOM05D000852 ORTHO05D000657 2.3e-11 73.2 73 58.9
CiPaw.04G168900 Carya illinoinensis HOM05D000852 ORTHO05D000657 4.0e-11 72.4 72 56.9
CSS0026585 Camellia sinensis var. sinensis HOM05D000852 ORTHO05D000657 6.8e-11 71.6 73 58.9
Haze_01126 Corylus avellana HOM05D000852 ORTHO05D000657 2.0e-10 70.1 71 52.1
Gohir.A05G009600 Gossypium hirsutum HOM05D000852 ORTHO05D000657 9.8e-10 67.8 73 54.8
Gohir.D05G010300 Gossypium hirsutum HOM05D000852 ORTHO05D000657 9.8e-10 67.8 73 54.8
CSS0019480 Camellia sinensis var. sinensis HOM05D000852 ORTHO05D000657 1.7e-09 67.0 82 50.0
Gorai.009G010700 Gossypium raimondii HOM05D000852 ORTHO05D000657 2.9e-09 66.2 72 54.2
Manes.14G128300 Manihot esculenta HOM05D000852 ORTHO05D000657 2.9e-09 66.2 73 56.2
Ciclev10010791m.g Citrus clementina HOM05D000852 ORTHO05D000657 3.7e-09 65.9 73 53.4
Gohir.D05G020500 Gossypium hirsutum HOM05D000852 ORTHO05D000657 3.7e-09 65.9 73 54.8
Gorai.009G020700 Gossypium raimondii HOM05D000852 ORTHO05D000657 3.7e-09 65.9 73 54.8
Lj4g0019246 Lotus japonicus HOM05D000852 ORTHO05D000657 3.7e-09 65.9 73 53.4
Duzib187G0147 Durio zibethinus HOM05D000852 ORTHO05D000657 4.9e-09 65.5 72 54.2
Gohir.A05G019400 Gossypium hirsutum HOM05D000852 ORTHO05D000657 4.9e-09 65.5 73 54.8
Atru.chr7.1248 Acer truncatum HOM05D000852 ORTHO05D000657 6.4e-09 65.1 73 57.5
Duzib168G0146 Durio zibethinus HOM05D000852 ORTHO05D000657 1.1e-08 64.3 71 54.9
Duzib150G0817 Durio zibethinus HOM05D000852 ORTHO05D000657 1.9e-08 63.5 73 53.4
Duzib168G1777 Durio zibethinus HOM05D000852 ORTHO05D000657 1.9e-08 63.5 73 50.7
Thecc.09G148100 Theobroma cacao HOM05D000852 ORTHO05D000657 1.9e-08 63.5 73 52.1
Lalb_Chr13g0302131 Lupinus albus HOM05D000852 ORTHO05D000657 2.4e-08 63.2 73 49.3
QL03p040171 Quercus lobata HOM05D000852 ORTHO05D000657 3.2e-08 62.8 40 72.5
VMungo1215G1491 Vigna mungo HOM05D000852 ORTHO05D000657 3.2e-08 62.8 72 52.8
COL.COLO4_23996 Corchorus olitorius HOM05D000852 ORTHO05D000657 4.1e-08 62.4 73 52.1
Glyma.05G010800 Glycine max HOM05D000852 ORTHO05D000657 4.1e-08 62.4 73 52.1
QL06p008477 Quercus lobata HOM05D000154 ORTHO05D000092 4.1e-08 62.4 65 52.3
Manes.06G050700 Manihot esculenta HOM05D000852 ORTHO05D000657 5.4e-08 62.0 72 54.2
TAR626G0485 Trochodendron aralioides HOM05D000852 ORTHO05D000657 5.4e-08 62.0 73 52.1
arahy.Tifrunner.gnm1.ann1.WHQ58B Arachis hypogaea HOM05D000852 ORTHO05D000657 7.0e-08 61.6 73 52.1
MBI01_g34145_MAGBIO Magnolia biondii HOM05D000852 ORTHO05D000657 7.0e-08 61.6 73 52.1
MBI01_g44857_MAGBIO Magnolia biondii HOM05D000852 ORTHO05D000657 7.0e-08 61.6 73 52.1
QL03p015900 Quercus lobata HOM05D000852 ORTHO05D000657 9.2e-08 61.2 29 96.6
RcHm_v2.0_Chr6g0298751 Rosa chinensis HOM05D000852 ORTHO05D000657 9.2e-08 61.2 73 50.7
Dinv11605 Davidia involucrata HOM05D000852 ORTHO05D000657 1.6e-07 60.5 73 50.7
Gohir.A06G058500 Gossypium hirsutum HOM05D000852 ORTHO05D000657 1.6e-07 60.5 73 53.4
Phvul.003G160600 Phaseolus vulgaris HOM05D000852 ORTHO05D000657 2.0e-07 60.1 73 50.7
Potri.006G155000 Populus trichocarpa HOM05D000852 ORTHO05D000657 2.0e-07 60.1 77 49.4
Prupe.7G237200 Prunus persica HOM05D000852 ORTHO05D000657 2.0e-07 60.1 73 52.1
GSVIVG01035765001 Vitis vinifera HOM05D000852 ORTHO05D000657 2.0e-07 60.1 73 52.1
Cc11_g01690 Coffea canephora HOM05D000852 ORTHO05D000657 2.7e-07 59.7 72 48.6
Hma1.2p1_0665F.1_g199300 Hydrangea macrophylla HOM05D000852 ORTHO05D000657 2.7e-07 59.7 72 51.4
PGR044G0388 Punica granatum HOM05D000852 ORTHO05D000657 2.7e-07 59.7 71 52.1
QL02p023255 Quercus lobata HOM05D000852 ORTHO05D000657 2.7e-07 59.7 72 52.8
MSTRG.11759 Avicennia marina HOM05D000852 ORTHO05D000657 3.5e-07 59.3 73 49.3
FAN20G1470 Fragaria x ananassa HOM05D000852 ORTHO05D000657 3.5e-07 59.3 73 49.3
Glyma.17G118500 Glycine max HOM05D000852 ORTHO05D000657 3.5e-07 59.3 73 50.7
Gohir.D06G056801 Gossypium hirsutum HOM05D000852 ORTHO05D000657 3.5e-07 59.3 73 52.1
QL02p023213 Quercus lobata HOM05D000852 ORTHO05D000657 3.5e-07 59.3 73 53.4
QL03p013335 Quercus lobata HOM05D000852 ORTHO05D000657 3.5e-07 59.3 74 47.3
Gorai.010G066500 Gossypium raimondii HOM05D000852 ORTHO05D000657 4.6e-07 58.9 72 52.8
Dinv30186 Davidia involucrata HOM05D000852 ORTHO05D000657 6.0e-07 58.5 73 52.1
MD02G1038100 Malus domestica HOM05D000852 ORTHO05D000657 6.0e-07 58.5 73 50.7
TAR383G0545 Trochodendron aralioides HOM05D000852 ORTHO05D000657 6.0e-07 58.5 73 49.3
FvH4_1g03970 Fragaria vesca HOM05D000852 ORTHO05D000657 7.8e-07 58.2 73 49.3
Haze_25637 Corylus avellana HOM05D000852 ORTHO05D000657 1.0e-06 57.8 54 51.9
Rhsim01G0087300 Rhododendron simsii HOM05D000852 ORTHO05D000657 1.0e-06 57.8 72 50.0
Rhsim01G0087900 Rhododendron simsii HOM05D000852 ORTHO05D000657 1.0e-06 57.8 72 50.0
RhsimUnG0079400 Rhododendron simsii HOM05D000852 ORTHO05D000657 1.0e-06 57.8 72 50.0
CANSAT56G2136 Cannabis sativa HOM05D000852 ORTHO05D000657 1.3e-06 57.4 73 49.3
CANSAT64G1813 Cannabis sativa HOM05D000852 ORTHO05D000657 1.3e-06 57.4 73 49.3
Cpa.g.sc334.4 Carica papaya HOM05D000852 ORTHO05D000657 1.3e-06 57.4 73 49.3
FvH4_2g29730 Fragaria vesca HOM05D000852 ORTHO05D000657 1.3e-06 57.4 72 48.6
FAN24G2103 Fragaria x ananassa HOM05D000852 ORTHO05D000657 1.3e-06 57.4 72 48.6
HanXRQChr06g0179941 Helianthus annuus HOM05D000852 ORTHO05D000657 1.3e-06 57.4 73 47.9
PGR142G1226 Punica granatum HOM05D000852 ORTHO05D000657 1.3e-06 57.4 73 49.3
TAR625G0423 Trochodendron aralioides HOM05D000852 ORTHO05D000657 1.3e-06 57.4 73 53.4
Lsat_1_v5_gn_5_32121 Lactuca sativa HOM05D000852 ORTHO05D000657 1.7e-06 57.0 73 46.6
Atru.chr7.2362 Acer truncatum HOM05D000852 ORTHO05D000657 2.3e-06 56.6 72 48.6
SHI12433 Sapria himalayana HOM05D000852 ORTHO05D000657 2.3e-06 56.6 81 45.7
Thecc.09G119800 Theobroma cacao HOM05D000852 ORTHO05D000657 2.3e-06 56.6 75 54.7
TAR383G0255 Trochodendron aralioides HOM05D000852 ORTHO05D000657 2.3e-06 56.6 73 47.9
ECA236G4138 Erigeron canadensis HOM05D000003 ORTHO05D000004 3.0e-06 56.2 72 48.6
FAN23G2365 Fragaria x ananassa HOM05D000852 ORTHO05D000657 3.0e-06 56.2 73 47.9
Oeu045194.1 Olea europaea HOM05D000852 ORTHO05D000657 3.0e-06 56.2 73 49.3
COL.COLO4_15582 Corchorus olitorius HOM05D000852 ORTHO05D000657 3.9e-06 55.8 72 48.6
QL02p023316 Quercus lobata HOM05D000852 ORTHO05D000657 3.9e-06 55.8 72 51.4
Actinidia13262 Actinidia chinensis HOM05D000852 ORTHO05D000657 5.0e-06 55.5 73 45.2
Haze_21586 Corylus avellana HOM05D000852 ORTHO05D000657 5.0e-06 55.5 71 50.7
Lsat_1_v5_gn_8_58141 Lactuca sativa HOM05D000852 ORTHO05D000657 5.0e-06 55.5 73 45.2
Medtr3g107770 Medicago truncatula HOM05D000852 ORTHO05D000657 5.0e-06 55.5 73 50.7
Potri.018G031901 Populus trichocarpa HOM05D000852 ORTHO05D000657 5.0e-06 55.5 73 45.2
RcHm_v2.0_Chr2g0089451 Rosa chinensis HOM05D000852 ORTHO05D000657 5.0e-06 55.5 73 49.3
TWI63G1447 Tripterygium wilfordii HOM05D000852 ORTHO05D000657 5.0e-06 55.5 73 47.9
Rhsim02G0193500 Rhododendron simsii HOM05D000852 ORTHO05D000657 6.6e-06 55.1 71 49.3
MSTRG.25857 Avicennia marina HOM05D000852 ORTHO05D000657 8.6e-06 54.7 73 45.2
CSS0026278 Camellia sinensis var. sinensis HOM05D000852 ORTHO05D000657 8.6e-06 54.7 72 48.6
FAN28G1046 Fragaria x ananassa HOM05D000852 ORTHO05D000657 8.6e-06 54.7 72 47.2
Sabra06G0122800 Salix brachista HOM05D000852 ORTHO05D000657 8.6e-06 54.7 75 46.7
Sabra18G0032800 Salix brachista HOM05D000852 ORTHO05D000657 8.6e-06 54.7 72 44.4
TPR.G28553 Trifolium pratense HOM05D000852 ORTHO05D000657 8.6e-06 54.7 73 49.3


User provided reference genes

Program Settings