Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p011519 Quercus lobata HOM05D004579 ORTHO05D005376 8.1e-42 173.3 88 100.0
QL02p103256 Quercus lobata HOM05D004579 ORTHO05D005376 9.0e-33 143.3 86 89.5
QL07p000612 Quercus lobata HOM05D004579 ORTHO05D005376 1.5e-32 142.5 86 89.5
CiPaw.15G041800 Carya illinoinensis HOM05D004579 ORTHO05D005376 5.9e-16 87.4 87 62.1
Cfa017933 Carpinus fangiana HOM05D004579 ORTHO05D005376 2.9e-15 85.1 87 62.1
Haze_18215 Corylus avellana HOM05D004579 ORTHO05D005376 3.6e-13 78.2 87 59.8
Medtr3g104160 Medicago truncatula HOM05D004579 ORTHO05D005376 7.9e-13 77.0 82 56.1
Medtr3g104200 Medicago truncatula HOM05D004579 ORTHO05D005376 2.3e-12 75.5 82 56.1
Manes.03G046600 Manihot esculenta HOM05D004579 ORTHO05D005376 8.8e-12 73.6 91 56.0
Dinv23423 Davidia involucrata HOM05D004579 ORTHO05D005376 1.3e-10 69.7 87 51.7
Atru.chr7.2020 Acer truncatum HOM05D004579 ORTHO05D005376 4.8e-10 67.8 90 51.1
Dinv27966 Davidia involucrata HOM05D004579 ORTHO05D005376 3.1e-09 65.1 54 59.3
Glyma.04G049800 Glycine max HOM05D004579 ORTHO05D005376 3.1e-09 65.1 87 51.7
Phvul.009G076200 Phaseolus vulgaris HOM05D004579 ORTHO05D005376 4.1e-09 64.7 89 55.1
arahy.Tifrunner.gnm1.ann1.C5JVH4 Arachis hypogaea HOM05D004579 ORTHO05D005376 5.3e-09 64.3 88 46.6
Cpa.g.sc84.21 Carica papaya HOM05D004579 ORTHO05D005376 6.9e-09 63.9 87 47.1
arahy.Tifrunner.gnm1.ann1.FCA0JR Arachis hypogaea HOM05D004579 ORTHO05D005376 9.1e-09 63.5 88 46.6
Duzib168G1792 Durio zibethinus HOM05D004579 ORTHO05D005376 9.1e-09 63.5 87 50.6
Ca_15870_v3 Cicer arietinum L. HOM05D004579 ORTHO05D005376 1.2e-08 63.2 90 47.8
arahy.Tifrunner.gnm1.ann1.E1I8FT Arachis hypogaea HOM05D004579 ORTHO05D005376 2.6e-08 62.0 88 46.6
Ciclev10009210m.g Citrus clementina HOM05D004579 ORTHO05D005376 2.6e-08 62.0 91 50.5
Glyma.06G050800 Glycine max HOM05D004579 ORTHO05D005376 3.4e-08 61.6 87 50.6
TAR383G0831 Trochodendron aralioides HOM05D004579 ORTHO05D005376 1.3e-07 59.7 86 43.0
TAR626G1184 Trochodendron aralioides HOM05D004579 ORTHO05D005376 1.3e-07 59.7 88 45.5
arahy.Tifrunner.gnm1.ann1.XC2JTE Arachis hypogaea HOM05D004579 ORTHO05D005376 1.7e-07 59.3 88 44.3
CSS0030937 Camellia sinensis var. sinensis HOM05D004579 ORTHO05D005376 2.2e-07 58.9 87 46.0
Prupe.1G414900 Prunus persica HOM05D004579 ORTHO05D005376 2.2e-07 58.9 93 44.1
DCAR_019057 Daucus carota HOM05D004579 ORTHO05D005376 3.8e-07 58.2 87 47.1
Psat5g036520 Pisum sativum HOM05D004579 ORTHO05D005376 8.5e-07 57.0 90 47.8
Gohir.A07G022140 Gossypium hirsutum HOM05D004579 ORTHO05D005376 1.1e-06 56.6 88 47.7
Gohir.D07G022900 Gossypium hirsutum HOM05D004579 ORTHO05D005376 3.2e-06 55.1 89 47.2
Gorai.001G023600 Gossypium raimondii HOM05D004579 ORTHO05D005376 3.2e-06 55.1 89 47.2
Thecc.09G051200 Theobroma cacao HOM05D004579 ORTHO05D005376 4.2e-06 54.7 87 44.8
Actinidia18195 Actinidia chinensis HOM05D004579 ORTHO05D005376 5.5e-06 54.3 87 43.7
arahy.Tifrunner.gnm1.ann1.LJH7P1 Arachis hypogaea HOM05D004579 ORTHO05D005376 7.2e-06 53.9 89 43.8


User provided reference genes

Program Settings