Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p011411 Quercus lobata HOM05D008494 ORTHO05D010021 2.7e-58 228.4 111 100.0
Cfa004401 Carpinus fangiana HOM05D008494 ORTHO05D010021 7.6e-37 157.1 100 76.0
CiPaw.02G000600 Carya illinoinensis HOM05D008494 ORTHO05D010021 2.4e-35 152.1 103 73.8
Haze_15004 Corylus avellana HOM05D008494 ORTHO05D010021 4.2e-35 151.4 101 76.2
Prupe.6G302200 Prunus persica HOM05D008494 ORTHO05D010021 1.6e-31 139.4 100 68.0
Manes.08G105911 Manihot esculenta HOM05D008494 ORTHO05D010021 1.1e-27 126.7 101 64.4
Oeu033225.1 Olea europaea HOM05D008494 ORTHO05D010021 1.4e-27 126.3 96 59.4
Manes.09G182700 Manihot esculenta HOM05D008494 ORTHO05D010021 5.5e-27 124.4 101 65.3
MD04G1183700 Malus domestica HOM05D008494 ORTHO05D010021 3.5e-26 121.7 108 58.3
RcHm_v2.0_Chr3g0459041 Rosa chinensis HOM05D008494 ORTHO05D010021 3.5e-26 121.7 101 60.4
FAN14G1748 Fragaria x ananassa HOM05D008494 ORTHO05D010021 2.3e-25 119.0 101 62.4
Ciclev10030055m.g Citrus clementina HOM05D008494 ORTHO05D010021 8.7e-25 117.1 110 60.0
Lalb_Chr02g0147351 Lupinus albus HOM05D008494 ORTHO05D010021 1.3e-23 113.2 90 58.9
Peaxi162Scf00194g00512 Petunia axillaris HOM05D008494 ORTHO05D010021 3.4e-21 105.1 101 56.4
DCAR_003254 Daucus carota HOM05D008494 ORTHO05D010021 7.6e-21 104.0 88 60.2
DCAR_029308 Daucus carota HOM05D008494 ORTHO05D010021 1.3e-20 103.2 93 53.8
Atru.chr12.1501 Acer truncatum HOM05D008494 ORTHO05D010021 4.9e-20 101.3 104 57.7
Atru.chr12.1506 Acer truncatum HOM05D008494 ORTHO05D010021 6.5e-20 100.9 104 57.7
Oeu000174.1 Olea europaea HOM05D008494 ORTHO05D010021 1.9e-19 99.4 102 52.0
Potri.013G000100 Populus trichocarpa HOM05D008494 ORTHO05D010021 1.9e-19 99.4 112 52.7
Thecc.05G331500 Theobroma cacao HOM05D008494 ORTHO05D010021 4.2e-19 98.2 98 55.1
Peaxi162Scf00071g00117 Petunia axillaris HOM05D008494 ORTHO05D010021 9.3e-19 97.1 100 46.0
Dinv30960 Davidia involucrata HOM05D008494 ORTHO05D010021 2.1e-18 95.9 73 65.8
VMungo1383G1264 Vigna mungo HOM05D008494 ORTHO05D010021 2.1e-18 95.9 101 47.5
Rhsim11G0107000 Rhododendron simsii HOM05D000136 ORTHO05D000080 3.5e-18 95.1 97 47.4
Glyma.03G227000 Glycine max HOM05D008494 ORTHO05D010021 1.0e-17 93.6 102 48.0
Potri.005G000800 Populus trichocarpa HOM05D008494 ORTHO05D010021 1.8e-17 92.8 113 51.3
Solyc01g102430.2 Solanum lycopersicum HOM05D008494 ORTHO05D010021 1.8e-17 92.8 110 47.3
Glyma.19G223900 Glycine max HOM05D008494 ORTHO05D010021 1.5e-16 89.7 102 48.0
Phvul.001G220800 Phaseolus vulgaris HOM05D008494 ORTHO05D010021 3.3e-16 88.6 101 45.5
Lalb_Chr04g0260271 Lupinus albus HOM05D008494 ORTHO05D010021 4.8e-15 84.7 104 47.1
Medtr7g111200 Medicago truncatula HOM05D008494 ORTHO05D010021 6.3e-15 84.3 101 47.5
SGA_v2.0_scaffold311G48250 Striga asiatica HOM05D008494 ORTHO05D010021 1.1e-14 83.6 90 48.9
TPR.G1638 Trifolium pratense HOM05D008494 ORTHO05D010021 2.4e-14 82.4 87 49.4
Lalb_Chr21g0309951 Lupinus albus HOM05D008494 ORTHO05D010021 6.9e-14 80.9 66 54.5
Actinidia17727 Actinidia chinensis HOM05D008494 ORTHO05D010021 7.6e-13 77.4 59 55.9
ECA234G2754 Erigeron canadensis HOM05D008494 ORTHO05D010021 2.2e-12 75.9 102 41.2
arahy.Tifrunner.gnm1.ann1.J2KNI4 Arachis hypogaea HOM05D008494 ORTHO05D010021 2.9e-12 75.5 100 43.0
Thhalv10005177m.g Eutrema salsugineum HOM05D003663 ORTHO05D010021 5.0e-12 74.7 86 48.8
Carub.0006s2421 Capsella rubella HOM05D003663 ORTHO05D010021 6.5e-12 74.3 91 45.1
Nitab4.5_0004090g0020 Nicotiana tabacum HOM05D008494 ORTHO05D010021 1.1e-11 73.6 90 52.2
Hma1.2p1_0157F.1_g069490 Hydrangea macrophylla HOM05D008494 ORTHO05D010021 1.9e-11 72.8 67 52.2
Sp2g21380 Schrenkiella parvula HOM05D003663 ORTHO05D010021 2.5e-11 72.4 89 44.9
GSVIVG01031356001 Vitis vinifera HOM05D008494 ORTHO05D010021 3.2e-11 72.0 48 72.9
CARHR186970 Cardamine hirsuta HOM05D003663 ORTHO05D010021 7.2e-11 70.9 90 46.7
Nn4g25250 Nelumbo nucifera HOM05D008494 ORTHO05D010021 7.2e-11 70.9 91 42.9
CARHR080410 Cardamine hirsuta HOM05D003663 ORTHO05D010021 1.6e-10 69.7 95 43.2
Migut.B00913 Erythranthe guttata HOM05D008494 ORTHO05D010021 2.1e-10 69.3 92 45.7
BraA03t12614Z Brassica rapa HOM05D003663 ORTHO05D010021 3.6e-10 68.6 101 39.6
Lj1g0018830 Lotus japonicus HOM05D008494 ORTHO05D010021 3.6e-10 68.6 102 41.2
THA.LOC104803108 Tarenaya hassleriana HOM05D003663 ORTHO05D010021 3.6e-10 68.6 93 45.2
BcaNung02824 Brassica carinata HOM05D003663 ORTHO05D010021 6.1e-10 67.8 87 42.5
Oeu025675.1 Olea europaea HOM05D008494 ORTHO05D010021 6.1e-10 67.8 74 50.0
Sp3g04840 Schrenkiella parvula HOM05D003663 ORTHO05D010021 7.9e-10 67.4 96 39.6
BcaC04g23625 Brassica carinata HOM05D003663 ORTHO05D010021 1.0e-09 67.0 91 40.7
A03p34380 Brassica napus HOM05D003663 ORTHO05D010021 2.3e-09 65.9 101 38.6
A02p39370 Brassica napus HOM05D003663 ORTHO05D010021 3.0e-09 65.5 89 43.8
Thhalv10021806m.g Eutrema salsugineum HOM05D003663 ORTHO05D010021 3.0e-09 65.5 93 40.9
BcaB04g19233 Brassica carinata HOM05D003663 ORTHO05D010021 5.1e-09 64.7 101 37.6
C02p59100 Brassica napus HOM05D003663 ORTHO05D010021 5.1e-09 64.7 92 41.3
BolC2t11965H Brassica oleracea HOM05D003663 ORTHO05D010021 2.5e-08 62.4 89 41.6
BcaB04g19228 Brassica carinata HOM05D003663 ORTHO05D010021 3.3e-08 62.0 101 37.6
BcaC01g04309 Brassica carinata HOM05D003663 ORTHO05D010021 3.3e-08 62.0 101 37.6
C03p41850 Brassica napus HOM05D003663 ORTHO05D010021 3.3e-08 62.0 101 37.6
BolC3t16468H Brassica oleracea HOM05D003663 ORTHO05D010021 3.3e-08 62.0 101 37.6
Carub.0003s0532 Capsella rubella HOM05D003663 ORTHO05D010021 3.3e-08 62.0 99 39.4
Ah.02g121360 Amaranthus hybridus HOM05D008494 ORTHO05D010021 4.3e-08 61.6 77 45.5
Sed0011896 Sechium edule HOM05D008494 ORTHO05D010021 9.7e-08 60.5 91 35.2
CsaV3_2G007440 Cucumis sativus L. HOM05D008494 ORTHO05D010021 1.3e-07 60.1 98 41.8
AL3G16710 Arabidopsis lyrata HOM05D003663 ORTHO05D010021 8.2e-07 57.4 100 37.0
A09p05770 Brassica napus HOM05D003663 ORTHO05D005327 2.4e-06 55.8 72 45.8
BraA09t36218Z Brassica rapa HOM05D003663 ORTHO05D005327 2.4e-06 55.8 72 45.8


User provided reference genes

Program Settings