Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p010449 Quercus lobata HOM05D006221 ORTHO05D007759 0.0e+00 1252.7 624 100.0
Haze_03998 Corylus avellana HOM05D006221 ORTHO05D007759 1.5e-283 979.2 667 76.5
CiPaw.07G035200 Carya illinoinensis HOM05D006221 ORTHO05D007759 6.2e-269 930.6 557 83.7
Manes.09G180400 Manihot esculenta HOM05D006221 ORTHO05D007759 5.2e-252 874.4 626 71.1
GSVIVG01031316001 Vitis vinifera HOM05D006221 ORTHO05D007759 1.7e-242 842.8 614 69.5
Sabra05G0000700 Salix brachista HOM05D006221 ORTHO05D007759 2.9e-242 842.0 638 69.4
Sabra05G0014800 Salix brachista HOM05D006221 ORTHO05D007759 8.4e-242 840.5 638 69.3
Atru.chr12.1555 Acer truncatum HOM05D006221 ORTHO05D007759 4.2e-241 838.2 622 69.6
TWI38G0202 Tripterygium wilfordii HOM05D006221 ORTHO05D007759 1.6e-240 836.3 626 68.5
Dinv30939 Davidia involucrata HOM05D006221 ORTHO05D007759 3.9e-239 831.6 621 69.1
Potri.005G003400 Populus trichocarpa HOM05D006221 ORTHO05D007759 7.3e-238 827.4 635 68.8
CsaV3_1G038010 Cucumis sativus L. HOM05D006221 ORTHO05D007759 4.8e-237 824.7 622 68.8
Ciclev10011303m.g Citrus clementina HOM05D006221 ORTHO05D007759 4.6e-232 808.1 623 66.0
ClCG03G017850 Citrullus lanatus HOM05D006221 ORTHO05D007759 6.7e-231 804.3 626 68.2
Sed0012716 Sechium edule HOM05D006221 ORTHO05D007759 1.5e-230 803.1 620 66.6
Eucgr.B01816 Eucalyptus grandis HOM05D006221 ORTHO05D007759 3.7e-229 798.5 619 68.0
CANSAT54G2840 Cannabis sativa HOM05D006221 ORTHO05D007759 5.8e-227 791.2 627 65.7
Thecc.05G328800 Theobroma cacao HOM05D006221 ORTHO05D007759 1.3e-226 790.0 622 65.4
Hma1.2p1_0052F.1_g030430 Hydrangea macrophylla HOM05D006221 ORTHO05D007759 1.9e-225 786.2 626 66.8
PGR083G2161 Punica granatum HOM05D006221 ORTHO05D007759 2.7e-224 782.3 623 65.8
Actinidia11678 Actinidia chinensis HOM05D006221 ORTHO05D007759 3.9e-223 778.5 627 63.8
Duzib177G0418 Durio zibethinus HOM05D006221 ORTHO05D007759 6.7e-223 777.7 563 69.6
Lj1g0008157 Lotus japonicus HOM05D006221 ORTHO05D007759 8.7e-223 777.3 622 65.1
Glyma.19G226000 Glycine max HOM05D006221 ORTHO05D007759 2.6e-219 765.8 622 63.7
Lalb_Chr18g0046191 Lupinus albus HOM05D006221 ORTHO05D007759 7.6e-219 764.2 611 64.2
arahy.Tifrunner.gnm1.ann1.CKL802 Arachis hypogaea HOM05D006221 ORTHO05D007759 1.0e-218 763.8 629 63.4
Lju99A6T47 Lonicera japonica HOM05D006221 ORTHO05D007759 2.2e-218 762.7 633 63.2
THA.LOC104816844 Tarenaya hassleriana HOM05D006221 ORTHO05D007759 2.3e-215 752.7 617 66.5
Prupe.6G305800 Prunus persica HOM05D006221 ORTHO05D007759 1.3e-213 746.9 600 66.2
Gorai.013G131100 Gossypium raimondii HOM05D006221 ORTHO05D007759 2.2e-213 746.1 628 62.6
Gohir.A13G113400 Gossypium hirsutum HOM05D006221 ORTHO05D007759 2.8e-213 745.7 618 62.9
Gohir.D13G116600 Gossypium hirsutum HOM05D006221 ORTHO05D007759 3.7e-213 745.3 618 62.9
Ca_09279_v3 Cicer arietinum L. HOM05D006221 ORTHO05D007759 1.1e-212 743.8 615 63.1
VMungo1383G1939 Vigna mungo HOM05D006221 ORTHO05D007759 1.2e-211 740.3 623 62.6
Phvul.001G222600 Phaseolus vulgaris HOM05D006221 ORTHO05D007759 1.3e-210 736.9 623 62.1
TPR.G1625 Trifolium pratense HOM05D006221 ORTHO05D007759 1.3e-210 736.9 620 61.9
MSTRG.16421 Avicennia marina HOM05D006221 ORTHO05D007759 5.0e-210 734.9 627 61.4
RcHm_v2.0_Chr3g0458361 Rosa chinensis HOM05D006221 ORTHO05D007759 5.0e-210 734.9 614 63.7
Oeu016545.1 Olea europaea HOM05D006221 ORTHO05D007759 9.4e-209 730.7 615 61.8
arahy.Tifrunner.gnm1.ann1.7121P0 Arachis hypogaea HOM05D006221 ORTHO05D007759 1.2e-208 730.3 629 61.7
Medtr7g111610 Medicago truncatula HOM05D006221 ORTHO05D007759 1.2e-208 730.3 642 59.3
Nn3g21902 Nelumbo nucifera HOM05D006221 ORTHO05D007759 1.8e-207 726.5 614 62.1
Solyc01g101110.3 Solanum lycopersicum HOM05D006221 ORTHO05D007759 1.8e-207 726.5 617 61.1
Sopen01g044560 Solanum pennellii HOM05D006221 ORTHO05D007759 4.3e-206 721.8 618 60.4
Migut.B00875 Erythranthe guttata HOM05D006221 ORTHO05D007759 1.3e-205 720.3 624 62.0
vmacro01605 Vaccinium macrocarpon HOM05D006221 ORTHO05D007759 1.7e-205 719.9 671 57.2
Thhalv10007117m.g Eutrema salsugineum HOM05D006221 ORTHO05D007759 2.2e-205 719.5 621 62.0
Psat3g014840 Pisum sativum HOM05D006221 ORTHO05D007759 8.2e-205 717.6 563 63.9
Rhsim11G0101500 Rhododendron simsii HOM05D006221 ORTHO05D007759 8.2e-205 717.6 748 53.7
CARHR009420 Cardamine hirsuta HOM05D006221 ORTHO05D007759 1.1e-204 717.2 614 62.5
AT1G09450 Arabidopsis thaliana HOM05D006221 ORTHO05D007759 1.4e-204 716.8 615 61.8
MD04G1187300 Malus domestica HOM05D006221 ORTHO05D007759 3.4e-203 712.2 602 63.3
Sp1g08060 Schrenkiella parvula HOM05D006221 ORTHO05D007759 1.4e-201 706.8 621 61.2
Carub.0001s0880 Capsella rubella HOM05D006221 ORTHO05D007759 1.2e-200 703.7 615 61.1
FAN05G2605 Fragaria x ananassa HOM05D006221 ORTHO05D007759 2.1e-200 703.0 621 61.5
FvH4_6g08390 Fragaria vesca HOM05D006221 ORTHO05D007759 7.9e-200 701.0 626 61.5
Cc02_g35760 Coffea canephora HOM05D006221 ORTHO05D007759 1.8e-199 699.9 650 60.2
BraA08t35366Z Brassica rapa HOM05D006221 ORTHO05D007759 8.8e-199 697.6 619 61.1
AL1G19970 Arabidopsis lyrata HOM05D006221 ORTHO05D007759 9.7e-198 694.1 614 60.9
SGA_v2.0_scaffold671G53422 Striga asiatica HOM05D006221 ORTHO05D007759 1.7e-197 693.3 664 56.5
A08p34550 Brassica napus HOM05D006221 ORTHO05D007759 2.8e-197 692.6 626 60.1
Aqoxy2G02530 Aquilegia oxysepala HOM05D006221 ORTHO05D007759 4.8e-197 691.8 563 63.2
PSO761G0564 Papaver somniferum HOM05D006221 ORTHO05D007759 6.3e-197 691.4 616 59.6
PSO210G0944 Papaver somniferum HOM05D006221 ORTHO05D007759 1.4e-196 690.3 616 59.3
BcaB03g13298 Brassica carinata HOM05D006221 ORTHO05D007759 2.4e-196 689.5 629 59.3
C08p12920 Brassica napus HOM05D006221 ORTHO05D007759 5.3e-196 688.3 626 59.4
Aa31LG1G5650 Aethionema arabicum HOM05D006221 ORTHO05D007759 2.0e-195 686.4 643 58.6
FAN02G1566 Fragaria x ananassa HOM05D006221 ORTHO05D007759 3.5e-195 685.6 609 60.9
Sc16g0009350 Simmondsia chinensis HOM05D006221 ORTHO05D007759 3.5e-195 685.6 626 59.3
BolC8t48922H Brassica oleracea HOM05D006221 ORTHO05D007759 2.5e-193 679.5 638 58.3
MBI19_g32730_MAGBIO Magnolia biondii HOM05D006221 ORTHO05D007759 4.2e-193 678.7 635 58.6
SalBow5G5479 Salvia bowleyana HOM05D006221 ORTHO05D007759 7.2e-193 677.9 658 56.5
DCAR_005251 Daucus carota HOM05D006221 ORTHO05D007759 1.1e-188 664.1 632 57.8
BcaC07g38511 Brassica carinata HOM05D006221 ORTHO05D007759 7.0e-188 661.4 612 59.0
AUR62006807 Chenopodium quinoa HOM05D006221 ORTHO05D007759 7.2e-185 651.4 623 59.2
Peaxi162Scf00357g00116 Petunia axillaris HOM05D006221 ORTHO05D007759 1.2e-182 644.0 626 55.9
Nitab4.5_0014566g0010 Nicotiana tabacum HOM05D006221 ORTHO05D007759 4.4e-182 642.1 614 56.5
HanXRQChr14g0449401 Helianthus annuus HOM05D006221 ORTHO05D007759 8.3e-181 637.9 621 57.5
CAN.G1248.26 Capsicum annuum HOM05D006221 ORTHO05D007759 2.7e-179 632.9 649 53.8
PGSC0003DMG400018290 Solanum tuberosum HOM05D006221 ORTHO05D007759 2.7e-179 632.9 608 55.8
Hund07275 Selenicereus undatus HOM05D006221 ORTHO05D007759 1.3e-178 630.6 621 56.8
AUR62000466 Chenopodium quinoa HOM05D006221 ORTHO05D007759 6.5e-178 628.2 623 58.4
Hund07280 Selenicereus undatus HOM05D006221 ORTHO05D007759 3.6e-176 622.5 549 60.7
Hma1.2p1_0052F.1_g030440 Hydrangea macrophylla HOM05D006221 ORTHO05D007759 6.1e-176 621.7 570 60.0
ECA236G2609 Erigeron canadensis HOM05D006221 ORTHO05D007759 2.0e-174 616.7 620 54.0
EL10Ac4g09547 Beta vulgaris HOM05D006221 ORTHO05D007759 7.5e-174 614.8 610 56.4
Lsat_1_v5_gn_9_77141 Lactuca sativa HOM05D006221 ORTHO05D007759 4.1e-172 609.0 617 54.3
Nitab4.5_0001931g0080 Nicotiana tabacum HOM05D006221 ORTHO05D007759 7.0e-172 608.2 540 58.9
Potri.013G003600 Populus trichocarpa HOM05D006221 ORTHO05D007759 4.4e-158 562.4 404 71.0
PSO017G3773 Papaver somniferum HOM05D006221 ORTHO05D007759 2.9e-157 559.7 502 58.2
Dinv30938 Davidia involucrata HOM05D006221 ORTHO05D007759 2.0e-150 537.0 415 66.3
SHI18018 Sapria himalayana HOM05D006221 ORTHO05D007759 9.8e-150 534.6 516 57.8
HPP92_001185 Vanilla planifolia HOM05D006221 ORTHO05D007759 5.4e-148 528.9 664 47.7
Zm00001eb109970 Zea mays HOM05D006221 ORTHO05D007759 1.6e-147 527.3 622 49.5
unitig_699.g19069 Utricularia gibba HOM05D006221 ORTHO05D007759 3.3e-145 519.6 627 49.0
TAR633G1110 Trochodendron aralioides HOM05D003727 ORTHO05D004731 2.5e-137 493.4 462 58.4
ATR0796G167 Amborella trichopoda HOM05D006221 ORTHO05D007759 3.4e-134 483.0 633 47.4
MELO3C015244.2 Cucumis melo HOM05D006221 ORTHO05D007759 3.8e-133 479.6 367 66.8
SEGI_23402 Sequoiadendron giganteum HOM05D006221 ORTHO05D007759 1.2e-118 431.4 702 41.2
Ah.10g026960 Amaranthus hybridus HOM05D006221 ORTHO05D007759 6.7e-114 415.6 435 54.0
CDE08G0155 Ceratophyllum demersum HOM05D006221 ORTHO05D007759 6.9e-111 405.6 589 43.0
FAN09G0827 Fragaria x ananassa HOM05D006221 ORTHO05D007759 2.6e-110 403.7 518 48.1
AagrBONN_evm.TU.Sc2ySwM_228.2896 Anthoceros agrestis HOM05D006221 ORTHO05D007759 4.2e-100 369.8 370 51.4
Mapoly0101s0065 Marchantia polymorpha HOM05D006221 ORTHO05D007759 3.5e-99 366.7 371 52.0
Pp3c5_21110 Physcomitrium patens HOM05D006221 ORTHO05D007759 3.3e-97 360.1 359 52.4
COL.COLO4_05510 Corchorus olitorius HOM05D006221 ORTHO05D007759 3.2e-92 343.6 628 40.4
CBR_g46893 Chara braunii HOM05D006221 ORTHO05D007759 3.4e-86 323.6 333 49.5
Cpa.g.sc48.218 Carica papaya HOM05D006221 ORTHO05D007759 3.8e-85 320.1 537 39.9
SMO169G0298 Selaginella moellendorffii HOM05D006221 ORTHO05D007759 1.2e-62 245.4 225 52.9
Glyma.03G228700 Glycine max HOM05D006221 ORTHO05D007759 3.2e-60 237.3 148 77.7
Cre02.g108000 Chlamydomonas reinhardtii HOM05D006221 ORTHO05D007759 1.3e-53 215.3 352 35.5
Actinidia16908 Actinidia chinensis HOM05D006221 ORTHO05D007759 3.2e-47 194.1 173 58.4
Lj9A230T20 Lonicera japonica HOM05D006221 ORTHO05D007759 1.3e-40 172.2 255 40.0
MCO05G201 Micromonas commoda HOM05D006221 ORTHO05D007759 5.4e-39 166.8 168 51.8
Nn5g27477 Nelumbo nucifera HOM05D001388 ORTHO05D001234 6.4e-32 143.3 127 56.7
PRCOL_00002024 Prasinoderma coloniale HOM05D006221 ORTHO05D007759 8.6e-29 132.9 190 39.5
PRCOL_00002025 Prasinoderma coloniale HOM05D006221 ORTHO05D007759 8.9e-18 96.3 207 31.9
C09p35620 Brassica napus HOM05D006221 ORTHO05D007759 9.9e-17 92.8 66 60.6
BolC9t56398H Brassica oleracea HOM05D006221 ORTHO05D007759 9.9e-17 92.8 66 60.6
FvH4_1g12820 Fragaria vesca HOM05D006221 ORTHO05D007759 1.3e-13 82.4 79 58.2
Actinidia26529 Actinidia chinensis HOM05D006221 ORTHO05D007759 1.4e-10 72.4 39 74.4
MELO3C029284.2 Cucumis melo HOM05D006221 ORTHO05D007759 2.4e-07 61.6 82 47.6
PSO170G3396 Papaver somniferum HOM05D000502 ORTHO05D000356 9.3e-07 59.7 123 39.8


User provided reference genes

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