Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p009441 Quercus lobata HOM05D010135 ORTHO05D011377 1.5e-47 192.6 99 100.0
QL93p2005_0018 Quercus lobata HOM05D010135 ORTHO05D011377 1.5e-47 192.6 99 100.0
Haze_04005 Corylus avellana HOM05D010135 ORTHO05D011377 1.8e-21 105.9 109 62.4
Lalb_Chr21g0310111 Lupinus albus HOM05D010135 ORTHO05D011377 2.7e-17 92.0 102 57.8
Lj5g0007613 Lotus japonicus HOM05D010135 ORTHO05D011377 3.5e-17 91.7 96 60.4
VMungo0720G3097 Vigna mungo HOM05D001037 ORTHO05D011377 2.8e-14 82.0 88 55.7
Phvul.007G204200 Phaseolus vulgaris HOM05D010135 ORTHO05D011377 4.7e-14 81.3 91 54.9
Thecc.05G328000 Theobroma cacao HOM05D010135 ORTHO05D011377 6.2e-14 80.9 88 55.7
Glyma.20G093300 Glycine max HOM05D010135 ORTHO05D011377 1.1e-13 80.1 92 55.4
Sabra13G0003500 Salix brachista HOM05D010135 ORTHO05D011377 4.0e-13 78.2 100 48.0
Potri.013G004300 Populus trichocarpa HOM05D010135 ORTHO05D011377 1.2e-12 76.6 100 50.0
Gohir.A13G177500 Gossypium hirsutum HOM05D010135 ORTHO05D011377 2.0e-12 75.9 99 49.5
Gohir.D13G184100 Gossypium hirsutum HOM05D010135 ORTHO05D011377 2.0e-12 75.9 99 49.5
Gorai.013G209400 Gossypium raimondii HOM05D010135 ORTHO05D011377 2.0e-12 75.9 99 49.5
Sabra05G0001400 Salix brachista HOM05D010135 ORTHO05D011377 4.4e-12 74.7 99 47.5
Sabra05G0015500 Salix brachista HOM05D010135 ORTHO05D011377 4.4e-12 74.7 99 47.5
Potri.005G004800 Populus trichocarpa HOM05D010135 ORTHO05D011377 9.9e-12 73.6 99 46.5
Dinv24500 Davidia involucrata HOM05D001037 ORTHO05D000888 2.2e-11 72.4 94 50.0
Glyma.10G144400 Glycine max HOM05D010135 ORTHO05D011377 2.9e-11 72.0 102 53.9
CiPaw.07G034800 Carya illinoinensis HOM05D010135 ORTHO05D011377 3.7e-11 71.6 99 54.5
MD12G1201300 Malus domestica HOM05D010135 ORTHO05D011377 6.4e-11 70.9 106 47.2
Prupe.6G306400 Prunus persica HOM05D010135 ORTHO05D011377 1.1e-10 70.1 105 50.5
RcHm_v2.0_Chr3g0458221 Rosa chinensis HOM05D008705 ORTHO05D011377 1.2e-09 66.6 84 54.8
FvH4_6g08340 Fragaria vesca HOM05D008705 ORTHO05D011377 7.8e-09 63.9 108 48.1
FAN14G0920 Fragaria x ananassa HOM05D008705 ORTHO05D011377 7.8e-09 63.9 108 48.1
Psat6g155320 Pisum sativum HOM05D029395 ORTHO05D011377 1.9e-07 59.3 100 48.0
arahy.Tifrunner.gnm1.ann1.XF9LE9 Arachis hypogaea HOM05D005057 ORTHO05D011377 2.5e-07 58.9 96 42.7
FAN09G1129 Fragaria x ananassa HOM05D008705 ORTHO05D000669 3.3e-07 58.5 101 45.5
Aqoxy2G02560 Aquilegia oxysepala HOM05D010135 ORTHO05D011377 5.6e-07 57.8 100 45.0
GSVIVG01031312001 Vitis vinifera HOM05D000039 ORTHO05D000815 7.3e-07 57.4 86 45.3
COL.COLO4_05504 Corchorus olitorius HOM05D003136 ORTHO05D003562 9.5e-07 57.0 90 42.2
Migut.B00862 Erythranthe guttata HOM05D051554 ORTHO05D011377 8.1e-06 53.9 109 41.3


User provided reference genes

Program Settings